BLASTX nr result

ID: Bupleurum21_contig00033599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033599
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi...   295   1e-77
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   284   3e-74
emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera]   280   4e-73
emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]   280   4e-73
emb|CAN67338.1| hypothetical protein VITISV_016115 [Vitis vinifera]   280   6e-73

>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
            gi|7267797|emb|CAB81200.1| putative retrotransposon
            polyprotein [Arabidopsis thaliana]
          Length = 1203

 Score =  295 bits (756), Expect = 1e-77
 Identities = 144/243 (59%), Positives = 179/243 (73%), Gaps = 1/243 (0%)
 Frame = -1

Query: 1131 DLLQEHGLSNCKPLSLPMDSHLKFTTIMGDLLPHPLPYQRLLGQLIYLTITRPDIAFPVH 952
            +LL++ GLS CKP S+PMD +L  T  MG LLP+   Y+ L+G+L+YL ITRPDI F VH
Sbjct: 780  NLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAVH 839

Query: 951  TLSQHMNAPTTVHFQAAKRLLRYLAGSPSQGILLATSSATQLTAFCDSDWASCPTSRKST 772
            TLSQ ++APT +H QAA ++LRYL G+P QG++ + SS   L  F D+DW +C  SR+S 
Sbjct: 840  TLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLMYSASSELCLNGFSDADWGTCKDSRRSV 899

Query: 771  TGFCIFLGHSPISWKSKKQSVVARSSAKVEYRSMAMTTCEITWLTALLKDLGFKTTSPTE 592
            TGFCI+LG S I+WKSKKQSVV+RSS + EYRS+A  TCEI WL  LLKDL    T P +
Sbjct: 900  TGFCIYLGTSLITWKSKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAK 959

Query: 591  LKCDNKAALAIAANPVLHERTKHVEIDCHYIRDQISKGLISTSHVPSTEQVADIFTKVL- 415
            L CDNK+AL +A NPV HERTKH+EIDCH +RDQI  G + T HVP+  Q+ADI TK L 
Sbjct: 960  LFCDNKSALHLATNPVFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPLH 1019

Query: 414  PVQ 406
            PVQ
Sbjct: 1020 PVQ 1022


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  284 bits (727), Expect = 3e-74
 Identities = 137/252 (54%), Positives = 181/252 (71%)
 Frame = -1

Query: 1131 DLLQEHGLSNCKPLSLPMDSHLKFTTIMGDLLPHPLPYQRLLGQLIYLTITRPDIAFPVH 952
            D+LQ+ GL+  KP   PM+ +LK T   G+LL  P  Y+RL+G+LIYLT+TRPDI + V 
Sbjct: 1470 DILQDTGLTGVKPEKFPMEQNLKLTNEDGELLHDPSRYRRLVGRLIYLTVTRPDIVYSVR 1529

Query: 951  TLSQHMNAPTTVHFQAAKRLLRYLAGSPSQGILLATSSATQLTAFCDSDWASCPTSRKST 772
            TLSQ MN P   H++AA R+LRY+ GSP QG+ L + +   L+AFCDSDW  C  SR+S 
Sbjct: 1530 TLSQFMNTPRKPHWEAALRVLRYIKGSPGQGLFLPSENNLTLSAFCDSDWGGCRMSRRSV 1589

Query: 771  TGFCIFLGHSPISWKSKKQSVVARSSAKVEYRSMAMTTCEITWLTALLKDLGFKTTSPTE 592
            +G+C+FLG S ISWKSKKQ+ V+RSSA+ EYR+MA T  E+TWL  +LKDL  +   P  
Sbjct: 1590 SGYCVFLGSSLISWKSKKQTNVSRSSAEAEYRAMANTCLELTWLRYILKDLKVELDKPAP 1649

Query: 591  LKCDNKAALAIAANPVLHERTKHVEIDCHYIRDQISKGLISTSHVPSTEQVADIFTKVLP 412
            L CDN+AAL IAANPV HERTKH+EIDCH +R+++  G+I   +V +  Q+AD+FTK L 
Sbjct: 1650 LFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQAGVIRPCYVSTKMQLADVFTKALG 1709

Query: 411  VQQHQYLIHKLG 376
             +Q ++L  KLG
Sbjct: 1710 REQFEFLCTKLG 1721


>emb|CAN63730.1| hypothetical protein VITISV_030286 [Vitis vinifera]
          Length = 1205

 Score =  280 bits (717), Expect = 4e-73
 Identities = 132/253 (52%), Positives = 184/253 (72%)
 Frame = -1

Query: 1131 DLLQEHGLSNCKPLSLPMDSHLKFTTIMGDLLPHPLPYQRLLGQLIYLTITRPDIAFPVH 952
            D+L+E G+ +CKP+  PMD ++K     G+ L  P  Y+RL+G+L YLTITRPDI+FPV 
Sbjct: 946  DILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVS 1005

Query: 951  TLSQHMNAPTTVHFQAAKRLLRYLAGSPSQGILLATSSATQLTAFCDSDWASCPTSRKST 772
             +SQ + +P   H+ A  R+LRY+  +PSQG+L      TQ+  + D+DWA  PT R+ST
Sbjct: 1006 VVSQFLQSPCDSHWDAVIRILRYIKSTPSQGVLYENRGHTQVVGYTDADWAGSPTDRRST 1065

Query: 771  TGFCIFLGHSPISWKSKKQSVVARSSAKVEYRSMAMTTCEITWLTALLKDLGFKTTSPTE 592
            +G+C+F+G + ISWKSKKQ VVARSSA+ EYR+MA+ TCE+ WL  LL++L F      +
Sbjct: 1066 SGYCVFIGGNLISWKSKKQDVVARSSAEAEYRAMALATCELIWLRHLLRELRFGKDEQMK 1125

Query: 591  LKCDNKAALAIAANPVLHERTKHVEIDCHYIRDQISKGLISTSHVPSTEQVADIFTKVLP 412
            L CDN+AAL IA+NPV HERTKH+E+DCH+IR++I+ G ++TS V S +Q+ADIFTK L 
Sbjct: 1126 LICDNQAALHIASNPVFHERTKHIEVDCHFIREKIASGCVATSFVNSNDQLADIFTKSLR 1185

Query: 411  VQQHQYLIHKLGA 373
              + +Y+ +KLGA
Sbjct: 1186 GPRIKYICNKLGA 1198


>emb|CAN65808.1| hypothetical protein VITISV_033389 [Vitis vinifera]
          Length = 1279

 Score =  280 bits (717), Expect = 4e-73
 Identities = 134/252 (53%), Positives = 179/252 (71%)
 Frame = -1

Query: 1131 DLLQEHGLSNCKPLSLPMDSHLKFTTIMGDLLPHPLPYQRLLGQLIYLTITRPDIAFPVH 952
            ++L++ G    KP++ PM+ + K +   G+LL  P  Y+RL+G+LIYLTITRPDI + VH
Sbjct: 1021 EILKDGGFLGAKPVNFPMEQNTKLSD-SGELLKDPSQYRRLVGRLIYLTITRPDITYSVH 1079

Query: 951  TLSQHMNAPTTVHFQAAKRLLRYLAGSPSQGILLATSSATQLTAFCDSDWASCPTSRKST 772
             LS+ M+AP   H +AA R+LRYL  SP QG+   + +   L AF DSDWA CP SR+ST
Sbjct: 1080 VLSRFMHAPRRPHMEAALRVLRYLKNSPGQGLFFPSQNDLSLRAFSDSDWAGCPISRRST 1139

Query: 771  TGFCIFLGHSPISWKSKKQSVVARSSAKVEYRSMAMTTCEITWLTALLKDLGFKTTSPTE 592
            TG+C+FLG S ISW++K+Q  V+ SSA+ EYR+MA T CE++WL +LLKDL      P  
Sbjct: 1140 TGYCVFLGSSLISWRTKRQKTVSLSSAEAEYRAMAGTCCELSWLRSLLKDLRILHPKPAL 1199

Query: 591  LKCDNKAALAIAANPVLHERTKHVEIDCHYIRDQISKGLISTSHVPSTEQVADIFTKVLP 412
            L CDN AAL IAANPV HERT+H+E+DCH+IRD+I  G + T H+ ST+Q+AD+FTK L 
Sbjct: 1200 LYCDNTAALHIAANPVFHERTRHIEMDCHFIRDKIQDGSVVTKHIASTBQLADVFTKPLG 1259

Query: 411  VQQHQYLIHKLG 376
             +    +IHKLG
Sbjct: 1260 KETFSTMIHKLG 1271


>emb|CAN67338.1| hypothetical protein VITISV_016115 [Vitis vinifera]
          Length = 949

 Score =  280 bits (715), Expect = 6e-73
 Identities = 132/253 (52%), Positives = 185/253 (73%)
 Frame = -1

Query: 1131 DLLQEHGLSNCKPLSLPMDSHLKFTTIMGDLLPHPLPYQRLLGQLIYLTITRPDIAFPVH 952
            D+L+E G+ +CKP+  PMD ++K     G+ L  P  Y+RL+G+L YLTITRPDI+FPV 
Sbjct: 690  DILEETGMLDCKPVDTPMDPNVKLVPGQGEPLGDPGRYRRLVGKLNYLTITRPDISFPVS 749

Query: 951  TLSQHMNAPTTVHFQAAKRLLRYLAGSPSQGILLATSSATQLTAFCDSDWASCPTSRKST 772
             +SQ + +P   H+ A  R+LRY+  +PSQG+L      TQ+  + D+DWA  PT R+ST
Sbjct: 750  VVSQFLQSPCDSHWDAVIRILRYIKSTPSQGVLYENRGHTQVVGYTDADWAGSPTDRRST 809

Query: 771  TGFCIFLGHSPISWKSKKQSVVARSSAKVEYRSMAMTTCEITWLTALLKDLGFKTTSPTE 592
            +G+C+F+G + ISWKSKKQ VVARSSA+VEYR+MA+ TCE+ WL  LL++L F      +
Sbjct: 810  SGYCVFIGGNLISWKSKKQDVVARSSAEVEYRAMALATCELIWLRHLLRELRFGKDEQMK 869

Query: 591  LKCDNKAALAIAANPVLHERTKHVEIDCHYIRDQISKGLISTSHVPSTEQVADIFTKVLP 412
            L CDN+AAL IA+NPV HERTKH+E+DC++IR++I+ G ++TS V S +Q+ADIFTK L 
Sbjct: 870  LICDNQAALHIASNPVFHERTKHIEVDCYFIREKIASGCVATSFVNSNDQLADIFTKSLR 929

Query: 411  VQQHQYLIHKLGA 373
              + +Y+ +KLGA
Sbjct: 930  GPRIKYICNKLGA 942


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