BLASTX nr result

ID: Bupleurum21_contig00033598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033598
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38567.3| unnamed protein product [Vitis vinifera]              301   2e-79
ref|XP_002278113.1| PREDICTED: structural maintenance of chromos...   301   2e-79
ref|XP_004146918.1| PREDICTED: structural maintenance of chromos...   295   1e-77
ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6...   290   3e-76
ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural m...   288   1e-75

>emb|CBI38567.3| unnamed protein product [Vitis vinifera]
          Length = 1027

 Score =  301 bits (770), Expect = 2e-79
 Identities = 158/287 (55%), Positives = 210/287 (73%)
 Frame = -3

Query: 861  LENLIKPIVKELNELQGKIKSMEQVEEISQRVQILKKKLAWAHVYDIDSQIQQEDTKIEK 682
            LE  I+PI+KELNELQ KI++ME VEEISQ+VQ LKKKLAW+ VYD+D Q+Q++  KIEK
Sbjct: 182  LEKSIEPILKELNELQVKIRNMEHVEEISQQVQQLKKKLAWSWVYDVDRQLQEQSAKIEK 241

Query: 681  LKERIPYCQDLIERQTVKIGDLEDRLAKKKAQIAILMEKTSEVRKIKEELQHNRSLASKK 502
            LK+RIP CQ  I+RQ  K+ +L + L KKK QIA +MEKT+EVR++KE+LQ   SLA+K+
Sbjct: 242  LKDRIPTCQARIDRQLGKMEELRECLTKKKTQIACMMEKTTEVRRMKEDLQQRLSLATKE 301

Query: 501  RSELEEECNRRVNEIQRMMKRAKLLEXXXXXXXXXXDKHTQAEEHEMEENLRGLQKEVDE 322
            R ELEEE  R+ N+IQ+M+   + L+           K+TQAEE E++E L+GLQ E+D 
Sbjct: 302  RLELEEEHCRKTNKIQKMVNLVRRLDQQVHEVHEQDLKNTQAEESEIKEMLKGLQDELDT 361

Query: 321  ALLQYERFKKDEDALYDSLAQADDDIKKLQSEVEGILKRDQQIRSSIRDLRLHQTNKVTA 142
              L   R K++E AL  SL+   D+I+K+  E++   ++ ++  S I +L+ HQTNKVTA
Sbjct: 362  TNLILSRLKEEESALSASLSIKMDEIRKISDEIDDYERKHRENYSYICELQQHQTNKVTA 421

Query: 141  FGGERVTSLLKAIERHHYRFGKPPIGPIGAHLKLIDGDRWAFAVENA 1
            FGG+RV  LL+AIERHH RF +PPIGPIGAHL L++GD WA AVE A
Sbjct: 422  FGGDRVIQLLRAIERHHQRFKRPPIGPIGAHLTLVNGDIWAIAVEIA 468


>ref|XP_002278113.1| PREDICTED: structural maintenance of chromosomes protein 6-like
            [Vitis vinifera]
          Length = 1057

 Score =  301 bits (770), Expect = 2e-79
 Identities = 158/287 (55%), Positives = 210/287 (73%)
 Frame = -3

Query: 861  LENLIKPIVKELNELQGKIKSMEQVEEISQRVQILKKKLAWAHVYDIDSQIQQEDTKIEK 682
            LE  I+PI+KELNELQ KI++ME VEEISQ+VQ LKKKLAW+ VYD+D Q+Q++  KIEK
Sbjct: 212  LEKSIEPILKELNELQVKIRNMEHVEEISQQVQQLKKKLAWSWVYDVDRQLQEQSAKIEK 271

Query: 681  LKERIPYCQDLIERQTVKIGDLEDRLAKKKAQIAILMEKTSEVRKIKEELQHNRSLASKK 502
            LK+RIP CQ  I+RQ  K+ +L + L KKK QIA +MEKT+EVR++KE+LQ   SLA+K+
Sbjct: 272  LKDRIPTCQARIDRQLGKMEELRECLTKKKTQIACMMEKTTEVRRMKEDLQQRLSLATKE 331

Query: 501  RSELEEECNRRVNEIQRMMKRAKLLEXXXXXXXXXXDKHTQAEEHEMEENLRGLQKEVDE 322
            R ELEEE  R+ N+IQ+M+   + L+           K+TQAEE E++E L+GLQ E+D 
Sbjct: 332  RLELEEEHCRKTNKIQKMVNLVRRLDQQVHEVHEQDLKNTQAEESEIKEMLKGLQDELDT 391

Query: 321  ALLQYERFKKDEDALYDSLAQADDDIKKLQSEVEGILKRDQQIRSSIRDLRLHQTNKVTA 142
              L   R K++E AL  SL+   D+I+K+  E++   ++ ++  S I +L+ HQTNKVTA
Sbjct: 392  TNLILSRLKEEESALSASLSIKMDEIRKISDEIDDYERKHRENYSYICELQQHQTNKVTA 451

Query: 141  FGGERVTSLLKAIERHHYRFGKPPIGPIGAHLKLIDGDRWAFAVENA 1
            FGG+RV  LL+AIERHH RF +PPIGPIGAHL L++GD WA AVE A
Sbjct: 452  FGGDRVIQLLRAIERHHQRFKRPPIGPIGAHLTLVNGDIWAIAVEIA 498


>ref|XP_004146918.1| PREDICTED: structural maintenance of chromosomes protein 6-like
            [Cucumis sativus]
          Length = 1052

 Score =  295 bits (754), Expect = 1e-77
 Identities = 150/287 (52%), Positives = 206/287 (71%)
 Frame = -3

Query: 861  LENLIKPIVKELNELQGKIKSMEQVEEISQRVQILKKKLAWAHVYDIDSQIQQEDTKIEK 682
            LE+ I+P+ KELNEL+GKIK+MEQVEEISQ+VQ LKKKLAW+ VYD+D Q+Q++  KI K
Sbjct: 206  LESTIRPVEKELNELRGKIKNMEQVEEISQQVQQLKKKLAWSWVYDVDKQLQEQSAKIGK 265

Query: 681  LKERIPYCQDLIERQTVKIGDLEDRLAKKKAQIAILMEKTSEVRKIKEELQHNRSLASKK 502
            L++RIP C+  I+ Q   +  L DR  +KK QIA +ME+TSEVR++K+ELQ   + A+++
Sbjct: 266  LQDRIPICRAKIDHQLGLVEKLRDRYIEKKTQIASMMERTSEVRRMKDELQETLTSATRE 325

Query: 501  RSELEEECNRRVNEIQRMMKRAKLLEXXXXXXXXXXDKHTQAEEHEMEENLRGLQKEVDE 322
            +  LEEE  R++N IQ++ KR +LLE           K+TQAEE E+EE L+ L+ E + 
Sbjct: 326  KLGLEEEHGRKINYIQKLAKRVRLLEQQVQDIHEQHIKNTQAEESEIEEKLKELESETEA 385

Query: 321  ALLQYERFKKDEDALYDSLAQADDDIKKLQSEVEGILKRDQQIRSSIRDLRLHQTNKVTA 142
            A     R K++E+AL +SL    ++IKK+  E+    K+  +   SI++L+ HQTNKVTA
Sbjct: 386  AKSTVMRLKEEENALMESLYSGRNEIKKIAEEIASYEKKGYEFSHSIQELKQHQTNKVTA 445

Query: 141  FGGERVTSLLKAIERHHYRFGKPPIGPIGAHLKLIDGDRWAFAVENA 1
            FGG++V  LL+AIERHH RF KPPIGPIG+HL L++GD WA AVE A
Sbjct: 446  FGGDKVIQLLRAIERHHQRFKKPPIGPIGSHLNLVNGDMWAPAVEIA 492


>ref|XP_002510971.1| structural maintenance of chromosomes 6 smc6, putative [Ricinus
            communis] gi|223550086|gb|EEF51573.1| structural
            maintenance of chromosomes 6 smc6, putative [Ricinus
            communis]
          Length = 1058

 Score =  290 bits (742), Expect = 3e-76
 Identities = 155/287 (54%), Positives = 203/287 (70%)
 Frame = -3

Query: 861  LENLIKPIVKELNELQGKIKSMEQVEEISQRVQILKKKLAWAHVYDIDSQIQQEDTKIEK 682
            LE  IKPI KEL ELQ KIK+ME +EEISQ+VQ LKKKLAW+ VYD+D QI+ +  KI +
Sbjct: 212  LEATIKPIEKELAELQVKIKNMEHIEEISQQVQQLKKKLAWSWVYDVDKQIEGQRVKIGQ 271

Query: 681  LKERIPYCQDLIERQTVKIGDLEDRLAKKKAQIAILMEKTSEVRKIKEELQHNRSLASKK 502
            LK+RIP CQ  I+R  VK+  L D LAKKKA+IA +M+  SEVR+ +++LQH  SLA+K+
Sbjct: 272  LKDRIPTCQARIDRNLVKVDSLRDLLAKKKAKIANMMQTASEVREKQDQLQHLVSLATKQ 331

Query: 501  RSELEEECNRRVNEIQRMMKRAKLLEXXXXXXXXXXDKHTQAEEHEMEENLRGLQKEVDE 322
            + EL+EE  R  N IQ+++K  + LE           ++TQAEE E+EE L+ L+  V+ 
Sbjct: 332  KLELDEEHRRATNHIQKLLKSLRSLEQEVQYIQEQHAQNTQAEESEIEERLKELEYMVNA 391

Query: 321  ALLQYERFKKDEDALYDSLAQADDDIKKLQSEVEGILKRDQQIRSSIRDLRLHQTNKVTA 142
            A     R KKDE  L +S++    +I+K+  E+E   K++ ++R++IR  R H+TNKVTA
Sbjct: 392  ANATVIRLKKDESELSESVSMRMAEIRKITEEIESCEKKEYEMRTTIRQFRQHKTNKVTA 451

Query: 141  FGGERVTSLLKAIERHHYRFGKPPIGPIGAHLKLIDGDRWAFAVENA 1
            FGGERV  LL+ IERHH RF KPPIGPIGAHL L +GDRWA AVENA
Sbjct: 452  FGGERVIHLLQTIERHHQRFHKPPIGPIGAHLTLHNGDRWAPAVENA 498


>ref|XP_004166709.1| PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes
            protein 6-like, partial [Cucumis sativus]
          Length = 969

 Score =  288 bits (737), Expect = 1e-75
 Identities = 148/287 (51%), Positives = 203/287 (70%)
 Frame = -3

Query: 861  LENLIKPIVKELNELQGKIKSMEQVEEISQRVQILKKKLAWAHVYDIDSQIQQEDTKIEK 682
            LE+ I+P+ KELNEL  K K+MEQVEEISQ+VQ LKKKLAW+ VYD+D Q+Q++  KI K
Sbjct: 206  LESTIRPVEKELNELXRKNKNMEQVEEISQQVQQLKKKLAWSWVYDVDKQLQEQSAKIGK 265

Query: 681  LKERIPYCQDLIERQTVKIGDLEDRLAKKKAQIAILMEKTSEVRKIKEELQHNRSLASKK 502
            L++RIP C+  I+ Q   +  L DR  +KK QIA +ME+TSEVR++K+ELQ   + A+++
Sbjct: 266  LQDRIPICRAKIDHQLGLVEKLRDRYIEKKTQIASMMERTSEVRRMKDELQETLTSATRE 325

Query: 501  RSELEEECNRRVNEIQRMMKRAKLLEXXXXXXXXXXDKHTQAEEHEMEENLRGLQKEVDE 322
            +  LEEE  R++N IQ++ KR +LLE           K+TQAEE E+EE L+ L+ E + 
Sbjct: 326  KLGLEEEHGRKINYIQKLAKRVRLLEQQVQDIHEQHIKNTQAEESEIEEKLKELESETEA 385

Query: 321  ALLQYERFKKDEDALYDSLAQADDDIKKLQSEVEGILKRDQQIRSSIRDLRLHQTNKVTA 142
            A     R K++E+AL +SL    ++IKK+  E+    K+  +   SI++L+ HQTNKVTA
Sbjct: 386  AKSTVMRLKEEENALMESLYSGRNEIKKIAEEIASYEKKGYEFSHSIQELKQHQTNKVTA 445

Query: 141  FGGERVTSLLKAIERHHYRFGKPPIGPIGAHLKLIDGDRWAFAVENA 1
            FGG++V  LL+AIERHH RF KPPIGPIG+HL L++GD WA AVE A
Sbjct: 446  FGGDKVIQLLRAIERHHQRFKKPPIGPIGSHLNLVNGDMWAPAVEIA 492


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