BLASTX nr result

ID: Bupleurum21_contig00033593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033593
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago tr...    79   4e-13
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...    74   1e-11
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    72   6e-11
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...    69   3e-10
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    69   4e-10

>gb|ABN08700.1| Endonuclease/exonuclease/phosphatase [Medicago truncatula]
          Length = 814

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/121 (35%), Positives = 66/121 (54%)
 Frame = -3

Query: 398 NKFPLVALLETHVTKEQANTLSLLIPRRFRWRFNYNDHPNGRIWVGWDPSRYNIKFLCSS 219
           NKF +  L+ET +  ++ N +S +I +R+    NY+   NGRIWV W+P+  ++K + SS
Sbjct: 544 NKFDMCILVETRIKADKFNKISSMIFKRWPVLNNYDSAANGRIWVSWNPTVLDVKPIASS 603

Query: 218 VQQITCDIHCLTTGNDFIITFVYALNTSQERRLLWEELHRINNCISGDSESPAWCIVGDF 39
            Q I C++  LT+   F    VYA NT ++R+ LW  +       +    S    I GDF
Sbjct: 604 AQAIHCEVDNLTSSECFNFVAVYAFNTLEQRKELWNFIAH-----TSAQNSRNLLIGGDF 658

Query: 38  N 36
           N
Sbjct: 659 N 659


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/117 (31%), Positives = 61/117 (52%)
 Frame = -3

Query: 386 LVALLETHVTKEQANTLSLLIPRRFRWRFNYNDHPNGRIWVGWDPSRYNIKFLCSSVQQI 207
           +  L+ET V  + A  +   +     +  NY  H NGR+W+ WD S+ +++ +  S Q +
Sbjct: 371 IAILIETRVKNKNAKKIRDKLKLPHNYLDNYKWHDNGRLWIEWDNSKIDVRHVKCSSQYV 430

Query: 206 TCDIHCLTTGNDFIITFVYALNTSQERRLLWEELHRINNCISGDSESPAWCIVGDFN 36
              ++ L     F +T VYALN    R++LW++L  I+    G      WC++GDFN
Sbjct: 431 HVGVYNLQGEFKFWLTAVYALNQLDRRKVLWKDLEAIHKHQQG-----PWCVIGDFN 482


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 46/130 (35%), Positives = 67/130 (51%), Gaps = 1/130 (0%)
 Frame = -3

Query: 401 TNKFPLVALLETHVTKEQANTLSLLIPRRFRWRFNYNDHPNGRIWVGWDPSRYNIKFLCS 222
           + K  L +L ET V ++ +  +      R+ W  NY   P GRIWVGW  +  NI  L  
Sbjct: 26  SQKISLCSLFETRVRQQNSGKIQKKFGNRWSWINNYACSPRGRIWVGWLNNDVNINVLSV 85

Query: 221 SVQQITCDIHCLTTGNDFIITFVYALNTSQERRLLWEELHRINNCISGDSESPAWCI-VG 45
           + Q IT ++      N F +  VY L+T  +R++LWEEL+   N +S   E    CI +G
Sbjct: 86  TEQVITMEVKNSYGLNMFKMAAVYGLHTIADRKVLWEELY---NFVSVCHEP---CILIG 139

Query: 44  DFNAFKSPDE 15
           D+NA  S  +
Sbjct: 140 DYNAVYSAQD 149


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/88 (36%), Positives = 50/88 (56%)
 Frame = -3

Query: 299 NYNDHPNGRIWVGWDPSRYNIKFLCSSVQQITCDIHCLTTGNDFIITFVYALNTSQERRL 120
           NY  H NGR+W+ WD S+ +++ +  S Q +   ++ L     F +T VYALN    R++
Sbjct: 340 NYKWHDNGRLWIEWDNSKIDVRHVKCSSQYVHVGVYNLQGEFKFWLTAVYALNQLDRRKV 399

Query: 119 LWEELHRINNCISGDSESPAWCIVGDFN 36
           LW++L  I+    G      WC++GDFN
Sbjct: 400 LWKDLEAIHKHQQG-----PWCVIGDFN 422


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 41/125 (32%), Positives = 62/125 (49%)
 Frame = -3

Query: 380 ALLETHVTKEQANTLSLLIPRRFRWRFNYNDHPNGRIWVGWDPSRYNIKFLCSSVQQITC 201
           ++LET V + +A    L     ++   NY     GRIWV WDP+   +  L  S Q I+C
Sbjct: 34  SILETRVKEHRARRSLLSSFPGWKSVCNYEFAALGRIWVVWDPA-VEVTVLSKSDQTISC 92

Query: 200 DIHCLTTGNDFIITFVYALNTSQERRLLWEELHRINNCISGDSESPAWCIVGDFNAFKSP 21
            +       +F++TFVYA+N    RR LW EL  +    +  +    W I+GDFN    P
Sbjct: 93  TVKLPHISTEFVVTFVYAVNCRYGRRRLWSELELL--AANQTTSDKPWIILGDFNQSLDP 150

Query: 20  DESDS 6
            ++ +
Sbjct: 151 VDAST 155


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