BLASTX nr result

ID: Bupleurum21_contig00033586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033586
         (952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arab...   330   3e-88
ref|XP_002513311.1| splicing endonuclease positive effector sen1...   327   3e-87
gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease p...   326   6e-87
ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsi...   326   6e-87
ref|XP_003576691.1| PREDICTED: uncharacterized protein LOC100835...   290   3e-76

>ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
            lyrata] gi|297338763|gb|EFH69180.1| hypothetical protein
            ARALYDRAFT_312653 [Arabidopsis lyrata subsp. lyrata]
          Length = 2129

 Score =  330 bits (846), Expect = 3e-88
 Identities = 182/324 (56%), Positives = 235/324 (72%), Gaps = 7/324 (2%)
 Frame = -2

Query: 951  LNPMNHRSGRSESRKKYLAELSQPLQQILKASYNDSQVQAINCCIGSLHPCNNIDLSLVQ 772
            L+P +  +  SE ++  L  L   LQQILK+S+N+SQ+QAI+  IGS +     D+SL+Q
Sbjct: 1164 LSPKSDSNYDSEVKRSDLRSLPHSLQQILKSSFNESQLQAISVAIGSSNLMKAFDISLIQ 1223

Query: 771  GPPGTGKTRTIVAIISGLLALCRADNEKRENHNKKSDTSSRTSINMHISQSAAIARAWQD 592
            GPPGTGKTRTIVAIISGLLA   A ++  +  N + D SS TS    ++ S AIARAWQD
Sbjct: 1224 GPPGTGKTRTIVAIISGLLA--SALHKASDRGNSEPDHSSSTS-RQRMNPSVAIARAWQD 1280

Query: 591  AALAKQLNTDEEKNSKYSCST-KGRVLICAQSNAAVDELVSRISTDGLYGSDGMMYKPYL 415
            AALAKQLN DEE N K +    +GRVLICAQSNAAVDELVSRIS+ G+YG DG M+KPYL
Sbjct: 1281 AALAKQLNDDEETNKKIAEKNGRGRVLICAQSNAAVDELVSRISSLGIYGRDGKMFKPYL 1340

Query: 414  VRVGNPKTVHPNSLPYFIDTLVENRIAQERMNDNVTEKDIRAESSTVLRSKLEKLVERIQ 235
            VRVGN KTVHPNS+P+F+DTLV+ R+A+ER+  N ++ +  A+SS +LRS LEK+V++I 
Sbjct: 1341 VRVGNAKTVHPNSMPFFLDTLVDQRLAEERIRINESKSNKGADSSALLRSNLEKIVDQIT 1400

Query: 234  FYEAKRANLGEGKSGSRDLPE------VDSGKEMCDAEIGARLKRLYVEKSAVFKDLAAA 73
             +EAKRAN+ +    ++D PE       D GK M DAE+G RL+RLY +K  ++KDL+A 
Sbjct: 1401 HFEAKRANINQESLDAKDKPENEHHNKDDDGKPMSDAELGIRLRRLYEQKRKIYKDLSAV 1460

Query: 72   QTQEKKLNEESKFLRKKLRKSILK 1
            Q QE+K N E + L+ KLRKSILK
Sbjct: 1461 QAQERKANYEMRALKHKLRKSILK 1484


>ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
            communis] gi|223547219|gb|EEF48714.1| splicing
            endonuclease positive effector sen1, putative [Ricinus
            communis]
          Length = 2110

 Score =  327 bits (838), Expect = 3e-87
 Identities = 183/323 (56%), Positives = 233/323 (72%), Gaps = 6/323 (1%)
 Frame = -2

Query: 951  LNPMNHRSGRSESRKKYLAELSQPLQQILKASYNDSQVQAINCCIGSLHPCNNIDLSLVQ 772
            L P+    G ++SR+  L  LSQPLQQ L+AS+NDSQ++AI+  IG  +   + +LSL+Q
Sbjct: 1105 LKPVKDSPGYNKSRELALGRLSQPLQQALEASFNDSQLEAISVAIGLPNSKKDFELSLIQ 1164

Query: 771  GPPGTGKTRTIVAIISGLLALCRADNEKRENHNKKSDTSSRTSINMH--ISQSAAIARAW 598
            GPPGTGKTRTIVAI+SGLL      N+ + + N + + SS  S+N    +SQS A+ARAW
Sbjct: 1165 GPPGTGKTRTIVAIVSGLLGSLHGTNDAKHSLNGRPNNSS-CSMNTRPKVSQSVALARAW 1223

Query: 597  QDAALAKQLNTDEEKNSKYSCS-TKGRVLICAQSNAAVDELVSRISTDGLYGSDGMMYKP 421
            QDAALA+QLN D  +N +      K RVLICAQSNAAVDELVSRIS+ GLYGSDG MYKP
Sbjct: 1224 QDAALARQLNEDVGRNEESPAGYLKRRVLICAQSNAAVDELVSRISSGGLYGSDGKMYKP 1283

Query: 420  YLVRVGNPKTVHPNSLPYFIDTLVENRIAQERMNDNVTEKDIRAESSTVLRSKLEKLVER 241
            Y+VRVGN KTVH NS+P+FIDTLV++R+A+ER N +  + D    SST LRS LEKLV+R
Sbjct: 1284 YIVRVGNAKTVHQNSMPFFIDTLVDHRLAEER-NLSDAKNDSSLVSSTALRSNLEKLVDR 1342

Query: 240  IQFYEAKRANLGEG---KSGSRDLPEVDSGKEMCDAEIGARLKRLYVEKSAVFKDLAAAQ 70
            I++YEAKRANL       S   ++ + D  KEM DAE+  +L++LY +K  +FKDL+ AQ
Sbjct: 1343 IRYYEAKRANLQNSDLKNSLDDEMLKGDDRKEMSDAELEVKLRKLYEQKKQIFKDLSTAQ 1402

Query: 69   TQEKKLNEESKFLRKKLRKSILK 1
             QEKK NEE K ++ KLRKSILK
Sbjct: 1403 AQEKKTNEEIKNMKHKLRKSILK 1425


>gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
            [Arabidopsis thaliana]
          Length = 2142

 Score =  326 bits (835), Expect = 6e-87
 Identities = 180/324 (55%), Positives = 234/324 (72%), Gaps = 7/324 (2%)
 Frame = -2

Query: 951  LNPMNHRSGRSESRKKYLAELSQPLQQILKASYNDSQVQAINCCIGSLHPCNNIDLSLVQ 772
            L+PMN  +  SE ++  L  L   LQQILK+S+N+SQ+QAI+  IGS +     D+SL+Q
Sbjct: 1165 LSPMNDSNYDSEVKRSDLRSLPHSLQQILKSSFNESQLQAISVAIGSSNLMKAFDISLIQ 1224

Query: 771  GPPGTGKTRTIVAIISGLLALCRADNEKRENHNKKSDTSSRTSINMHISQSAAIARAWQD 592
            GPPGTGKTRTIVAIISGLLA   A ++  +  N +   SS TS    ++ S A+ARAWQD
Sbjct: 1225 GPPGTGKTRTIVAIISGLLA--SASHKTSDRGNSEPGHSSSTS-RQGMNPSVAVARAWQD 1281

Query: 591  AALAKQLNTDEEKNSKYSCST-KGRVLICAQSNAAVDELVSRISTDGLYGSDGMMYKPYL 415
            AALAKQLN + E N K +    +GRVLICAQSNAAVDELVSRIS+ G+YG DG M+KPYL
Sbjct: 1282 AALAKQLNDNSETNRKIAEKNGRGRVLICAQSNAAVDELVSRISSLGIYGRDGKMFKPYL 1341

Query: 414  VRVGNPKTVHPNSLPYFIDTLVENRIAQERMNDNVTEKDIRAESSTVLRSKLEKLVERIQ 235
            VRVGN KTVH NS+P+F+DTLV+ R+A+ERM  N ++ +  A+SS +LRS LEK+V++I 
Sbjct: 1342 VRVGNAKTVHSNSMPFFLDTLVDQRLAEERMRINESKSNKGADSSALLRSNLEKVVDQIT 1401

Query: 234  FYEAKRANLGEGKSGSRDLPE------VDSGKEMCDAEIGARLKRLYVEKSAVFKDLAAA 73
             +EAKRAN+ +    ++D PE       D GK M DAE+G RL+RLY +K  ++KDL+A 
Sbjct: 1402 HFEAKRANINQESLDAKDKPENEHHNKDDDGKLMSDAELGIRLRRLYEQKRKIYKDLSAV 1461

Query: 72   QTQEKKLNEESKFLRKKLRKSILK 1
            Q QE+K N E + L++KLRKSILK
Sbjct: 1462 QAQERKANYEMRTLKQKLRKSILK 1485


>ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
            gi|332191377|gb|AEE29498.1| hydrolase domain-containing
            protein [Arabidopsis thaliana]
          Length = 2127

 Score =  326 bits (835), Expect = 6e-87
 Identities = 180/324 (55%), Positives = 234/324 (72%), Gaps = 7/324 (2%)
 Frame = -2

Query: 951  LNPMNHRSGRSESRKKYLAELSQPLQQILKASYNDSQVQAINCCIGSLHPCNNIDLSLVQ 772
            L+PMN  +  SE ++  L  L   LQQILK+S+N+SQ+QAI+  IGS +     D+SL+Q
Sbjct: 1259 LSPMNDSNYDSEVKRSDLRSLPHSLQQILKSSFNESQLQAISVAIGSSNLMKAFDISLIQ 1318

Query: 771  GPPGTGKTRTIVAIISGLLALCRADNEKRENHNKKSDTSSRTSINMHISQSAAIARAWQD 592
            GPPGTGKTRTIVAIISGLLA   A ++  +  N +   SS TS    ++ S A+ARAWQD
Sbjct: 1319 GPPGTGKTRTIVAIISGLLA--SASHKTSDRGNSEPGHSSSTS-RQGMNPSVAVARAWQD 1375

Query: 591  AALAKQLNTDEEKNSKYSCST-KGRVLICAQSNAAVDELVSRISTDGLYGSDGMMYKPYL 415
            AALAKQLN + E N K +    +GRVLICAQSNAAVDELVSRIS+ G+YG DG M+KPYL
Sbjct: 1376 AALAKQLNDNSETNRKIAEKNGRGRVLICAQSNAAVDELVSRISSLGIYGRDGKMFKPYL 1435

Query: 414  VRVGNPKTVHPNSLPYFIDTLVENRIAQERMNDNVTEKDIRAESSTVLRSKLEKLVERIQ 235
            VRVGN KTVH NS+P+F+DTLV+ R+A+ERM  N ++ +  A+SS +LRS LEK+V++I 
Sbjct: 1436 VRVGNAKTVHSNSMPFFLDTLVDQRLAEERMRINESKSNKGADSSALLRSNLEKVVDQIT 1495

Query: 234  FYEAKRANLGEGKSGSRDLPE------VDSGKEMCDAEIGARLKRLYVEKSAVFKDLAAA 73
             +EAKRAN+ +    ++D PE       D GK M DAE+G RL+RLY +K  ++KDL+A 
Sbjct: 1496 HFEAKRANINQESLDAKDKPENEHHNKDDDGKLMSDAELGIRLRRLYEQKRKIYKDLSAV 1555

Query: 72   QTQEKKLNEESKFLRKKLRKSILK 1
            Q QE+K N E + L++KLRKSILK
Sbjct: 1556 QAQERKANYEMRTLKQKLRKSILK 1579


>ref|XP_003576691.1| PREDICTED: uncharacterized protein LOC100835663 [Brachypodium
            distachyon]
          Length = 2045

 Score =  290 bits (742), Expect = 3e-76
 Identities = 160/318 (50%), Positives = 220/318 (69%), Gaps = 2/318 (0%)
 Frame = -2

Query: 951  LNPMNHRSGRSESRKKYLAELSQPLQQILKASYNDSQVQAINCCIGSLHPCNNIDLSLVQ 772
            LNP++  +   ES K YL +L++P++++LK+SYNDSQ+QA++  IG        DLSL+Q
Sbjct: 1033 LNPVSSTATNHESGKVYLDKLARPMRKVLKSSYNDSQLQAVSIAIGPTSSKMKCDLSLIQ 1092

Query: 771  GPPGTGKTRTIVAIISGLLALCRADNEKRENHNKKSDTSSRTSINMHISQSAAIARAWQD 592
            GPPGTGKT+TIVAI+S LL+L  AD+      +    ++  T     ISQ+AA+ARAWQD
Sbjct: 1093 GPPGTGKTKTIVAIVSALLSL-HADSSYNLPRHGPLASAEFTKPRTRISQTAAVARAWQD 1151

Query: 591  AALAKQLNTDEEK-NSKYSCSTKGRVLICAQSNAAVDELVSRISTDGLYGSDGMMYKPYL 415
            AALAKQ   D ++ N +    +KGR L+CAQSNAAVDELVSR+  DGLY +DG +Y+PY+
Sbjct: 1152 AALAKQQIKDSQRENPRTERLSKGRALVCAQSNAAVDELVSRLG-DGLYDADGKLYRPYI 1210

Query: 414  VRVGNPKTVHPNSLPYFIDTLVENRIAQERMNDNVTEKDIRAESSTVLRSKLEKLVERIQ 235
            VRVGN KTVHPNS+P+FIDTLVE R++ E   +N ++    A+SS  LR+ LEK+V+RI+
Sbjct: 1211 VRVGNAKTVHPNSMPFFIDTLVEQRLSDELKTNNESKVSSDAKSSGSLRASLEKVVDRIR 1270

Query: 234  FYEAKRANLGEGKS-GSRDLPEVDSGKEMCDAEIGARLKRLYVEKSAVFKDLAAAQTQEK 58
            FYE++R  +   K+      P+ D   E+ D  IGA+L  LY +K AV  +LA A   EK
Sbjct: 1271 FYESRRKLMDRDKTENDSSGPDEDEIDEVSDEAIGAKLNILYTQKRAVSAELATAYASEK 1330

Query: 57   KLNEESKFLRKKLRKSIL 4
            K+ +E+K L+ K+RKSIL
Sbjct: 1331 KIADENKSLKHKVRKSIL 1348


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