BLASTX nr result

ID: Bupleurum21_contig00033568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033568
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]   123   2e-26
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   113   2e-23
emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]   112   2e-23
ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [S...    87   1e-15

>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  125 bits (314), Expect = 4e-27
 Identities = 57/111 (51%), Positives = 76/111 (68%)
 Frame = +1

Query: 1   FNKNHIDVQVTDNERGQFRITGMYGEPDRSKREETWNLIRLLSSTNTLPWCLIGDMNNVL 180
           ++ NHID+ V +     +R TG YG PDR+++ E+WNL+R LS  + LPW  +GD N++L
Sbjct: 68  YSNNHIDLLVVEANNFIWRFTGYYGLPDRNRKMESWNLLRALSRQSALPWVCMGDYNDML 127

Query: 181 SQSDKKGGRPYPNHLIQGFMEVVEDCNLTDMDLIGYPYTWERGSKTAERIE 333
              +K+G   +PN   QGF E VEDC LTDM LIGYP+TWERG  TAE I+
Sbjct: 128 CAEEKRGRVLHPNSSFQGFREAVEDCKLTDMPLIGYPFTWERGRGTAEWIQ 178


>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score =  123 bits (308), Expect = 2e-26
 Identities = 50/111 (45%), Positives = 80/111 (72%)
 Frame = +1

Query: 1   FNKNHIDVQVTDNERGQFRITGMYGEPDRSKREETWNLIRLLSSTNTLPWCLIGDMNNVL 180
           ++++HID++V++ +  Q+R+TG YG PDRS+R  +WNL+R L S ++LPWC +GD N+++
Sbjct: 389 YSQSHIDMEVSEEDGLQWRVTGFYGFPDRSQRHLSWNLLRSLYSASSLPWCCLGDFNDIV 448

Query: 181 SQSDKKGGRPYPNHLIQGFMEVVEDCNLTDMDLIGYPYTWERGSKTAERIE 333
              +K+G  P+P  LI+GF   + DC L D+ L GYP+TWERG  ++  +E
Sbjct: 449 CNEEKRGSVPHPPWLIRGFCAALSDCQLQDLXLKGYPFTWERGRGSSHWVE 499


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  113 bits (282), Expect = 2e-23
 Identities = 48/107 (44%), Positives = 71/107 (66%)
 Frame = +1

Query: 13  HIDVQVTDNERGQFRITGMYGEPDRSKREETWNLIRLLSSTNTLPWCLIGDMNNVLSQSD 192
           +ID  VT   +  FR+TG YG  +RS+R  +W ++R L + ++LPWC+IGD N ++ QS+
Sbjct: 428 YIDAIVTLENQRMFRLTGFYGLANRSQRSSSWEILRNLHAAHSLPWCVIGDFNELMHQSE 487

Query: 193 KKGGRPYPNHLIQGFMEVVEDCNLTDMDLIGYPYTWERGSKTAERIE 333
           K G  P+P  LI+ F +VV +C L+D+  +GY YTWERG  T   +E
Sbjct: 488 KCGNHPHPGSLIEAFRQVVTNCGLSDLGYVGYAYTWERGRGTTRWVE 534


>emb|CAN76892.1| hypothetical protein VITISV_005356 [Vitis vinifera]
          Length = 1793

 Score =  112 bits (281), Expect = 2e-23
 Identities = 46/107 (42%), Positives = 70/107 (65%)
 Frame = +1

Query: 13   HIDVQVTDNERGQFRITGMYGEPDRSKREETWNLIRLLSSTNTLPWCLIGDMNNVLSQSD 192
            +ID  VT   +  FR+TG YG  ++S+R  +W ++R L + ++LPWC+IGD N ++ Q +
Sbjct: 720  YIDATVTLENQRMFRLTGFYGLANKSQRSSSWEILRNLHAAHSLPWCVIGDFNELMHQFE 779

Query: 193  KKGGRPYPNHLIQGFMEVVEDCNLTDMDLIGYPYTWERGSKTAERIE 333
            K+G  P+P  LI+ F + V DC L+D+  +GY YTWERG  T   +E
Sbjct: 780  KRGNHPHPGSLIEAFRQAVTDCGLSDLGYVGYAYTWERGRGTTRWVE 826


>ref|XP_002438099.1| hypothetical protein SORBIDRAFT_10g007985 [Sorghum bicolor]
           gi|241916322|gb|EER89466.1| hypothetical protein
           SORBIDRAFT_10g007985 [Sorghum bicolor]
          Length = 649

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/102 (39%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
 Frame = +1

Query: 4   NKNHIDVQVTD--NERGQFRITGMYGEPDRSKREETWNLIRLLSSTNTLPWCLIGDMNNV 177
           +K HIDV + D   +   +R TG YGEP R  R  +W+ ++ L++ + LPW   GD N V
Sbjct: 348 DKLHIDVAILDPGTQAPMWRFTGFYGEPRRELRGRSWDCLKFLNTQSELPWLCTGDFNEV 407

Query: 178 LSQSDKKGGRPYPNHLIQGFMEVVEDCNLTDMDLIGYPYTWE 303
           L   ++ GG+      + GF E V+ C L D+  IG PYTW+
Sbjct: 408 LEAHEQFGGQSRSERQMDGFREAVQVCGLMDLGFIGLPYTWD 449


Top