BLASTX nr result

ID: Bupleurum21_contig00033526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033526
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15651.3| unnamed protein product [Vitis vinifera]               99   3e-19
gb|ACN76858.1| seed ripening regulated protein [Camellia oleifera]     99   3e-19
ref|XP_002283673.1| PREDICTED: elongation factor 1-delta-like [V...    99   3e-19
sp|P93447.3|EF1D_PIMBR RecName: Full=Elongation factor 1-delta; ...    99   4e-19
gb|AFK47903.1| unknown [Lotus japonicus]                               94   1e-17

>emb|CBI15651.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 6/83 (7%)
 Frame = -3

Query: 409 MSFSFY--KSESGIKKLDEYLLTHSYISGFTTSKDDLIVYVALGKPPSSNYVNVSRWYNH 236
           M+ +FY   S SG+KKLDEYLLT SYISG+  SKDD+ V+ AL K PSS YVNVSRWYNH
Sbjct: 1   MAVTFYGVNSGSGLKKLDEYLLTRSYISGYQASKDDITVHAALSKAPSSEYVNVSRWYNH 60

Query: 235 IEALL--SGVGGH--SMAVEGFA 179
           IE+LL  SGV G    + +EGFA
Sbjct: 61  IESLLRISGVSGEGCGVTIEGFA 83


>gb|ACN76858.1| seed ripening regulated protein [Camellia oleifera]
          Length = 233

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/82 (62%), Positives = 61/82 (74%), Gaps = 4/82 (4%)
 Frame = -3

Query: 412 AMSFSFYKSESGIKKLDEYLLTHSYISGFTTSKDDLIVYVALGKPPSSNYVNVSRWYNHI 233
           A+SFS   S+SG+KKLDEYLLT SYI+G+  SKDD+ V+ AL KPP S +VN SRWYNHI
Sbjct: 2   AVSFSGVNSQSGLKKLDEYLLTRSYITGYQASKDDITVHAALSKPPPSEFVNASRWYNHI 61

Query: 232 EALL--SGVGGH--SMAVEGFA 179
           EALL  SGV G    + +EG A
Sbjct: 62  EALLRISGVSGEGCGVTIEGSA 83


>ref|XP_002283673.1| PREDICTED: elongation factor 1-delta-like [Vitis vinifera]
          Length = 230

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 6/83 (7%)
 Frame = -3

Query: 409 MSFSFY--KSESGIKKLDEYLLTHSYISGFTTSKDDLIVYVALGKPPSSNYVNVSRWYNH 236
           M+ +FY   S SG+KKLDEYLLT SYISG+  SKDD+ V+ AL K PSS YVNVSRWYNH
Sbjct: 1   MAVTFYGVNSGSGLKKLDEYLLTRSYISGYQASKDDITVHAALSKAPSSEYVNVSRWYNH 60

Query: 235 IEALL--SGVGGH--SMAVEGFA 179
           IE+LL  SGV G    + +EGFA
Sbjct: 61  IESLLRISGVSGEGCGVTIEGFA 83


>sp|P93447.3|EF1D_PIMBR RecName: Full=Elongation factor 1-delta; Short=EF-1-delta; AltName:
           Full=Elongation factor 1B-beta; AltName: Full=eEF-1B
           beta gi|1841870|gb|AAB68395.1| elongation factor 1-beta
           [Pimpinella brachycarpa]
          Length = 226

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 6/84 (7%)
 Frame = -3

Query: 409 MSFSFY--KSESGIKKLDEYLLTHSYISGFTTSKDDLIVYVALGKPPSSNYVNVSRWYNH 236
           M+ +FY   SE+G++KLDEYLL+ SYISG+  SKDDL V+ AL KPPSS YVNVSRWYNH
Sbjct: 1   MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNH 60

Query: 235 IEALL--SGVG--GHSMAVEGFAV 176
           +EALL  SGV   G  + VEG +V
Sbjct: 61  VEALLRISGVSAEGCGVTVEGSSV 84


>gb|AFK47903.1| unknown [Lotus japonicus]
          Length = 232

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 49/77 (63%), Positives = 56/77 (72%), Gaps = 4/77 (5%)
 Frame = -3

Query: 409 MSFSFYK--SESGIKKLDEYLLTHSYISGFTTSKDDLIVYVALGKPPSSNYVNVSRWYNH 236
           M+ + Y+  SESG+KKLDEYLLT SYISGF  SKDD+ VY AL K PS  +VNVSRWY H
Sbjct: 1   MAITLYELSSESGLKKLDEYLLTRSYISGFQASKDDVTVYAALSKAPSEEFVNVSRWYKH 60

Query: 235 IEALL--SGVGGHSMAV 191
           I+ALL  SGV G    V
Sbjct: 61  IDALLRISGVSGEGSGV 77


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