BLASTX nr result

ID: Bupleurum21_contig00033509 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033509
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   122   3e-26
emb|CBI32615.3| unnamed protein product [Vitis vinifera]              122   3e-26
ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Rici...   122   4e-26
ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   114   1e-23
ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-...   112   3e-23

>ref|XP_002273203.2| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Vitis vinifera]
          Length = 1575

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/110 (54%), Positives = 78/110 (70%)
 Frame = -2

Query: 366 LLYYSNSDMLLQLLKLTNIGSFLAGVFTLKDHHVLLLALQIIDNILQKQSHLLLSSFVNE 187
           L+Y+S SD LL+LL  TNI SFLAGVFT K+HHVL++ALQI++ +LQK S    +SF+ E
Sbjct: 478 LVYFSKSDNLLELLNNTNISSFLAGVFTRKEHHVLIIALQIVETLLQKLSDTFSNSFIKE 537

Query: 186 GLLFAVDALVMPERCSQYVSQIFKGIQLSNVQVQKSAVKDVPNCLCYAFE 37
           G+ FAVDAL+ PE+CSQ    +  G   S    Q+ A K+V  CLCYAF+
Sbjct: 538 GVFFAVDALLTPEKCSQLKFPVLSGTHFSIDSNQRHAAKEVFRCLCYAFD 587


>emb|CBI32615.3| unnamed protein product [Vitis vinifera]
          Length = 1487

 Score =  122 bits (306), Expect = 3e-26
 Identities = 60/110 (54%), Positives = 78/110 (70%)
 Frame = -2

Query: 366 LLYYSNSDMLLQLLKLTNIGSFLAGVFTLKDHHVLLLALQIIDNILQKQSHLLLSSFVNE 187
           L+Y+S SD LL+LL  TNI SFLAGVFT K+HHVL++ALQI++ +LQK S    +SF+ E
Sbjct: 478 LVYFSKSDNLLELLNNTNISSFLAGVFTRKEHHVLIIALQIVETLLQKLSDTFSNSFIKE 537

Query: 186 GLLFAVDALVMPERCSQYVSQIFKGIQLSNVQVQKSAVKDVPNCLCYAFE 37
           G+ FAVDAL+ PE+CSQ    +  G   S    Q+ A K+V  CLCYAF+
Sbjct: 538 GVFFAVDALLTPEKCSQLKFPVLSGTHFSIDSNQRHAAKEVFRCLCYAFD 587


>ref|XP_002525185.1| ubiquitin protein ligase E3a, putative [Ricinus communis]
           gi|223535482|gb|EEF37151.1| ubiquitin protein ligase
           E3a, putative [Ricinus communis]
          Length = 1561

 Score =  122 bits (305), Expect = 4e-26
 Identities = 63/110 (57%), Positives = 79/110 (71%)
 Frame = -2

Query: 366 LLYYSNSDMLLQLLKLTNIGSFLAGVFTLKDHHVLLLALQIIDNILQKQSHLLLSSFVNE 187
           L+ +S SDML++LLK  NI SFLAGVFT KDHHVL+LALQI + ILQ+ S + L+SF+ E
Sbjct: 468 LVSFSKSDMLVELLKTANISSFLAGVFTRKDHHVLILALQIAEVILQRFSDVFLNSFIKE 527

Query: 186 GLLFAVDALVMPERCSQYVSQIFKGIQLSNVQVQKSAVKDVPNCLCYAFE 37
           G+ FA+DAL+ PE+CS  +     GIQL     QK A K V  CLCYAF+
Sbjct: 528 GVFFAIDALMTPEKCSHSMFLSCNGIQLPPESSQKLASKAVLKCLCYAFD 577


>ref|XP_003541402.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1558

 Score =  114 bits (284), Expect = 1e-23
 Identities = 62/109 (56%), Positives = 75/109 (68%)
 Frame = -2

Query: 366 LLYYSNSDMLLQLLKLTNIGSFLAGVFTLKDHHVLLLALQIIDNILQKQSHLLLSSFVNE 187
           L+    SDML++LLK  NI SFLAGVFT KDHH+L+LALQI + ILQ  S   L  FV E
Sbjct: 463 LVSLRKSDMLVELLKNANISSFLAGVFTQKDHHMLMLALQIAEIILQNFSDNFLKLFVKE 522

Query: 186 GLLFAVDALVMPERCSQYVSQIFKGIQLSNVQVQKSAVKDVPNCLCYAF 40
           G+ FA+DAL+ PER S+ +   F GIQLS    QKS+ +D   CLCYAF
Sbjct: 523 GVFFAIDALLTPERSSKLMYPAFGGIQLSLDCSQKSSSRDTLKCLCYAF 571


>ref|XP_003537253.1| PREDICTED: E3 ubiquitin-protein ligase UPL4-like [Glycine max]
          Length = 1557

 Score =  112 bits (280), Expect = 3e-23
 Identities = 61/109 (55%), Positives = 75/109 (68%)
 Frame = -2

Query: 366 LLYYSNSDMLLQLLKLTNIGSFLAGVFTLKDHHVLLLALQIIDNILQKQSHLLLSSFVNE 187
           L+  S SDML+ LLK  NI SFLAGVFT KDHH+L+LALQI + ILQ  S   L  FV E
Sbjct: 463 LVSLSKSDMLVALLKNANISSFLAGVFTRKDHHMLMLALQIAEIILQNFSDDFLKLFVKE 522

Query: 186 GLLFAVDALVMPERCSQYVSQIFKGIQLSNVQVQKSAVKDVPNCLCYAF 40
           G+ FA++AL+ PER S+ +   F GIQLS    QKS+ +D   CLC+AF
Sbjct: 523 GVFFAIEALLTPERSSKLMYPAFGGIQLSLDSSQKSSSRDALKCLCFAF 571


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