BLASTX nr result

ID: Bupleurum21_contig00033508 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033508
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71665.1| hypothetical protein VITISV_011992 [Vitis vinifera]   105   3e-21
ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Viti...   102   4e-20
emb|CBI20225.3| unnamed protein product [Vitis vinifera]              102   4e-20
ref|XP_002300409.1| glutamate-gated kainate-type ion channel rec...    93   2e-17
emb|CBI20231.3| unnamed protein product [Vitis vinifera]               89   4e-16

>emb|CAN71665.1| hypothetical protein VITISV_011992 [Vitis vinifera]
          Length = 794

 Score =  105 bits (263), Expect = 3e-21
 Identities = 53/101 (52%), Positives = 70/101 (69%)
 Frame = +3

Query: 3   TTIVSMQGVVGVKRYFNDINPEFSEFKKRFRLKFSIEYPEEENNEPGISALEAYDAMWMV 182
           +TI +MQGVVGVK YFN+  P+F +F  RFR KFS+E+PEEEN+EPGI A++AYDA+W V
Sbjct: 262 STISTMQGVVGVKSYFNETEPKFQDFYVRFRKKFSLEHPEEENHEPGIFAVQAYDAIWTV 321

Query: 183 AKTLAERNTQISNQSQKFLEKASLYDSNGMTGRVHMIGRKL 305
           A+ L   N       Q  LE+ SL   +G+TG V   GR++
Sbjct: 322 AQALVGNNL----GGQHILEQISLTSFHGLTGLVEFTGRRI 358


>ref|XP_002282909.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 1452

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/101 (51%), Positives = 69/101 (68%)
 Frame = +3

Query: 3    TTIVSMQGVVGVKRYFNDINPEFSEFKKRFRLKFSIEYPEEENNEPGISALEAYDAMWMV 182
            +TI +MQGVVGVK YFN+  P+F +F  RFR KFS+E+PEEEN+E GI A++AYDA+W V
Sbjct: 874  STISTMQGVVGVKSYFNETEPKFQDFYVRFRKKFSLEHPEEENHELGIFAVQAYDAIWTV 933

Query: 183  AKTLAERNTQISNQSQKFLEKASLYDSNGMTGRVHMIGRKL 305
            A+ L   N       Q  LE+ SL   +G+TG V   GR++
Sbjct: 934  AQALVGNNL----GGQHILEQISLTSFHGLTGLVEFTGRRI 970


>emb|CBI20225.3| unnamed protein product [Vitis vinifera]
          Length = 1391

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/101 (51%), Positives = 69/101 (68%)
 Frame = +3

Query: 3    TTIVSMQGVVGVKRYFNDINPEFSEFKKRFRLKFSIEYPEEENNEPGISALEAYDAMWMV 182
            +TI +MQGVVGVK YFN+  P+F +F  RFR KFS+E+PEEEN+E GI A++AYDA+W V
Sbjct: 810  STISTMQGVVGVKSYFNETEPKFQDFYVRFRKKFSLEHPEEENHELGIFAVQAYDAIWTV 869

Query: 183  AKTLAERNTQISNQSQKFLEKASLYDSNGMTGRVHMIGRKL 305
            A+ L   N       Q  LE+ SL   +G+TG V   GR++
Sbjct: 870  AQALVGNNL----GGQHILEQISLTSFHGLTGLVEFTGRRI 906



 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 43/97 (44%), Positives = 57/97 (58%)
 Frame = +3

Query: 15  SMQGVVGVKRYFNDINPEFSEFKKRFRLKFSIEYPEEENNEPGISALEAYDAMWMVAKTL 194
           SM G+VGVK YFN+  P+F  F+ RFR  F   +P+EE NEPGI A +AYDA W  A  +
Sbjct: 65  SMDGIVGVKSYFNENTPQFKIFRGRFRRMFISVHPDEEKNEPGIYAAKAYDATWAAALAM 124

Query: 195 AERNTQISNQSQKFLEKASLYDSNGMTGRVHMIGRKL 305
               T      Q+ LEK S    +G+TG++    +KL
Sbjct: 125 ----TGGRGTGQQLLEKISNGQFDGLTGKIQFSDQKL 157


>ref|XP_002300409.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222847667|gb|EEE85214.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 782

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/99 (46%), Positives = 63/99 (63%)
 Frame = +3

Query: 9   IVSMQGVVGVKRYFNDINPEFSEFKKRFRLKFSIEYPEEENNEPGISALEAYDAMWMVAK 188
           I SMQG+VGVK YF++    F +F  RFR +F  E PEEENNEPGI A++AYDA+W +A+
Sbjct: 224 ISSMQGIVGVKSYFSETGTRFQDFSSRFRKRFRRENPEEENNEPGIYAVQAYDAIWTIAR 283

Query: 189 TLAERNTQISNQSQKFLEKASLYDSNGMTGRVHMIGRKL 305
            L   N     ++Q+ LEK    D  G++G+V     K+
Sbjct: 284 ALKGSN----RRNQELLEKVLQTDFQGLSGKVQFNNHKM 318


>emb|CBI20231.3| unnamed protein product [Vitis vinifera]
          Length = 781

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/100 (44%), Positives = 61/100 (61%)
 Frame = +3

Query: 6   TIVSMQGVVGVKRYFNDINPEFSEFKKRFRLKFSIEYPEEENNEPGISALEAYDAMWMVA 185
           TI SMQG++GV+ YF+   P F  F  RFR KF   YP+E+N+EPGI AL+AYDA+W VA
Sbjct: 275 TISSMQGILGVRSYFSQSGPRFQGFYLRFREKFHSLYPKEDNHEPGIFALQAYDAVWSVA 334

Query: 186 KTLAERNTQISNQSQKFLEKASLYDSNGMTGRVHMIGRKL 305
             +    +      Q FLE+ ++ D +G+  R+    R L
Sbjct: 335 LAMETAPSSKKGLIQPFLERIAISDFHGLNSRIQFNRRSL 374


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