BLASTX nr result

ID: Bupleurum21_contig00033504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033504
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519274.1| RNA binding protein, putative [Ricinus commu...   198   1e-48
ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266...   191   2e-46
emb|CBI39618.3| unnamed protein product [Vitis vinifera]              191   2e-46
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              170   6e-40
ref|XP_003555795.1| PREDICTED: uncharacterized protein LOC100805...   165   1e-38

>ref|XP_002519274.1| RNA binding protein, putative [Ricinus communis]
            gi|223541589|gb|EEF43138.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 524

 Score =  198 bits (504), Expect = 1e-48
 Identities = 116/311 (37%), Positives = 156/311 (50%), Gaps = 53/311 (17%)
 Frame = +3

Query: 3    LVEYQTLKTDDEAELLKESADAPYVRPVPPRIQRIDRFKILEEVDAWYNDGWWIGLINKI 182
            LV+Y  L TDDE   L+E   A + RP PP I     FK  E+VD W+N+GWW G ++++
Sbjct: 212  LVQYLNLVTDDETAPLREVISAEHARPCPPPIPSDAGFKEFEKVDVWFNEGWWEGQVSEV 271

Query: 183  VDSFRYTVYFWTTNEEIEFHHLSLRPHQEWICGKWI-----ISYKKESKLAVK------- 326
            +   +Y VYF +TNEE+EF H SLR HQ+WI GKW+       + KES +AVK       
Sbjct: 272  LPGSKYMVYFRSTNEELEFDHSSLRHHQKWIDGKWVQRNPKAQFSKESMVAVKSDEIDFQ 331

Query: 327  --------------------PTVG--------KLQIPYG-------------EGISQMTF 383
                                  VG        K Q   G             E I +  F
Sbjct: 332  YCKRNPKAQFSKESMVAVKSDDVGFQCDKRTPKAQFSKGTAVKSDEVGFQGDERIPKAEF 391

Query: 384  SKGAKVEVKSSKKYYEGLWFPAIVLRPPKNGKYLVEFLTLTTVXXXXXXXXXXXXXMIRP 563
            SKG  VEV+S+   ++G WF A +L   +N K+ V++  L T               IRP
Sbjct: 392  SKGTMVEVRSNAVGFQGAWFAATILNVMENDKFEVKYQRLLTDDETDFLREQASASDIRP 451

Query: 564  CPPITQSNNQFKPLEQIDAWYRGGWSVGQICKVFNGSKYTVYFKSTNEVLEFQHSYLRPH 743
             PP  + +  ++  E +DAWY   W VG+I KV   SKYTV+FK+T E LEF H  LRPH
Sbjct: 452  SPPHIEHDYPYRLFEMVDAWYNDAWWVGRIAKVHTNSKYTVHFKTTEE-LEFGHYELRPH 510

Query: 744  REWIDDKWIMA 776
            +EW++  W+ A
Sbjct: 511  QEWVNGYWVTA 521



 Score =  166 bits (419), Expect = 1e-38
 Identities = 96/263 (36%), Positives = 140/263 (53%), Gaps = 7/263 (2%)
 Frame = +3

Query: 3   LVEYQTLKT--DDEAELLKESADAPYVRPVPPRIQRIDRFKILEEVDAWYNDGWWIGLIN 176
           L++YQTL     D  + + E  D   VRP+PPR + I+ FK  + VD + ++GW  G + 
Sbjct: 46  LIKYQTLMNAESDARKPITELVDLARVRPMPPR-ELIECFKNGDSVDVFCDNGWQKGTVK 104

Query: 177 KIVDSFRYTVYFWTTNEEIEFHHLSLRPHQEWICGK--WIISYKKESKLAVKPTVG---K 341
            I+++ ++ V F   +E I     +LR H++W   +  W+    +   L    T     +
Sbjct: 105 DILENSKFVVGFDGKSEGIVAEQRNLRLHRDWDHDESSWVPPLLENKVLPATDTESSKVR 164

Query: 342 LQIPYGEGISQMTFSKGAKVEVKSSKKYYEGLWFPAIVLRPPKNGKYLVEFLTLTTVXXX 521
           L+I      S+  F  G +VEVKS ++ Y G WF A ++    N K LV++L L T    
Sbjct: 165 LKIKCSSRKSEPMFRTGTRVEVKSDEEGYVGAWFDANIIGTIGNDKLLVQYLNLVTDDET 224

Query: 522 XXXXXXXXXXMIRPCPPITQSNNQFKPLEQIDAWYRGGWSVGQICKVFNGSKYTVYFKST 701
                       RPCPP   S+  FK  E++D W+  GW  GQ+ +V  GSKY VYF+ST
Sbjct: 225 APLREVISAEHARPCPPPIPSDAGFKEFEKVDVWFNEGWWEGQVSEVLPGSKYMVYFRST 284

Query: 702 NEVLEFQHSYLRPHREWIDDKWI 770
           NE LEF HS LR H++WID KW+
Sbjct: 285 NEELEFDHSSLRHHQKWIDGKWV 307


>ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266586 [Vitis vinifera]
          Length = 296

 Score =  191 bits (485), Expect = 2e-46
 Identities = 104/262 (39%), Positives = 152/262 (58%), Gaps = 2/262 (0%)
 Frame = +3

Query: 3   LVEYQTLKTDDE-AELLKESADAPYVRPVPPRIQRIDRFKILEEVDAWYNDGWWIGLINK 179
           +VEY+T+  D+  A  L+E+ D   +RP PPR +R   F+I EEVDA+YNDGWW G+I +
Sbjct: 42  VVEYKTIMADESGANPLRETMDVLQLRPPPPR-ERSRTFQISEEVDAYYNDGWWEGVITE 100

Query: 180 IVDSFRYTVYFWTTNEEIEFHHLSLRPHQEWICGKWIISYKKES-KLAVKPTVGKLQIPY 356
             ++ R+ V+F T+ E++EF    LR H+EWI G W+   ++E  K   K  V    +  
Sbjct: 101 AHENSRFAVFFRTSREQLEFSENDLRLHREWINGNWVPPLEEEKVKTEEKSAVDVSSV-- 158

Query: 357 GEGISQMTFSKGAKVEVKSSKKYYEGLWFPAIVLRPPKNGKYLVEFLTLTTVXXXXXXXX 536
                   FS+G  VEV S +  ++G WF A +++     K ++E+ +L T         
Sbjct: 159 --------FSEGTLVEVSSDEDGFQGAWFAATIVKVIGKDKLMIEYKSLRTDDDTDFLRE 210

Query: 537 XXXXXMIRPCPPITQSNNQFKPLEQIDAWYRGGWSVGQICKVFNGSKYTVYFKSTNEVLE 716
                 IRP PP T   ++F  LE++DA Y  GW VG I KV + S Y VYF+STNE ++
Sbjct: 211 EVDALHIRPYPPETVVVDRFNLLEEVDALYNDGWWVGVISKVLSRSCYVVYFRSTNEEMK 270

Query: 717 FQHSYLRPHREWIDDKWIMATR 782
           F HS LR H++WID KW+ A++
Sbjct: 271 FDHSDLRLHQDWIDGKWVKASQ 292



 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
 Frame = +3

Query: 381 FSKGAKVEVKSSKKYYEGLWFPAIVLRPPKNGK----YLVEFLTLTTVXXXXXXXXXXXX 548
           F KGA++E+ S +  + G WF   V++PP   K     +VE+ T+               
Sbjct: 4   FKKGAEIEISSDEDGFRGAWFAGTVVKPPAKKKNKTLVVVEYKTIMADESGANPLRETMD 63

Query: 549 XM-IRPCPPITQSNNQFKPLEQIDAWYRGGWSVGQICKVFNGSKYTVYFKSTNEVLEFQH 725
            + +RP PP  +S   F+  E++DA+Y  GW  G I +    S++ V+F+++ E LEF  
Sbjct: 64  VLQLRPPPPRERSRT-FQISEEVDAYYNDGWWEGVITEAHENSRFAVFFRTSREQLEFSE 122

Query: 726 SYLRPHREWIDDKWI 770
           + LR HREWI+  W+
Sbjct: 123 NDLRLHREWINGNWV 137


>emb|CBI39618.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score =  191 bits (485), Expect = 2e-46
 Identities = 104/262 (39%), Positives = 152/262 (58%), Gaps = 2/262 (0%)
 Frame = +3

Query: 3   LVEYQTLKTDDE-AELLKESADAPYVRPVPPRIQRIDRFKILEEVDAWYNDGWWIGLINK 179
           +VEY+T+  D+  A  L+E+ D   +RP PPR +R   F+I EEVDA+YNDGWW G+I +
Sbjct: 61  VVEYKTIMADESGANPLRETMDVLQLRPPPPR-ERSRTFQISEEVDAYYNDGWWEGVITE 119

Query: 180 IVDSFRYTVYFWTTNEEIEFHHLSLRPHQEWICGKWIISYKKES-KLAVKPTVGKLQIPY 356
             ++ R+ V+F T+ E++EF    LR H+EWI G W+   ++E  K   K  V    +  
Sbjct: 120 AHENSRFAVFFRTSREQLEFSENDLRLHREWINGNWVPPLEEEKVKTEEKSAVDVSSV-- 177

Query: 357 GEGISQMTFSKGAKVEVKSSKKYYEGLWFPAIVLRPPKNGKYLVEFLTLTTVXXXXXXXX 536
                   FS+G  VEV S +  ++G WF A +++     K ++E+ +L T         
Sbjct: 178 --------FSEGTLVEVSSDEDGFQGAWFAATIVKVIGKDKLMIEYKSLRTDDDTDFLRE 229

Query: 537 XXXXXMIRPCPPITQSNNQFKPLEQIDAWYRGGWSVGQICKVFNGSKYTVYFKSTNEVLE 716
                 IRP PP T   ++F  LE++DA Y  GW VG I KV + S Y VYF+STNE ++
Sbjct: 230 EVDALHIRPYPPETVVVDRFNLLEEVDALYNDGWWVGVISKVLSRSCYVVYFRSTNEEMK 289

Query: 717 FQHSYLRPHREWIDDKWIMATR 782
           F HS LR H++WID KW+ A++
Sbjct: 290 FDHSDLRLHQDWIDGKWVKASQ 311



 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 5/135 (3%)
 Frame = +3

Query: 381 FSKGAKVEVKSSKKYYEGLWFPAIVLRPPKNGK----YLVEFLTLTTVXXXXXXXXXXXX 548
           F KGA++E+ S +  + G WF   V++PP   K     +VE+ T+               
Sbjct: 23  FKKGAEIEISSDEDGFRGAWFAGTVVKPPAKKKNKTLVVVEYKTIMADESGANPLRETMD 82

Query: 549 XM-IRPCPPITQSNNQFKPLEQIDAWYRGGWSVGQICKVFNGSKYTVYFKSTNEVLEFQH 725
            + +RP PP  +S   F+  E++DA+Y  GW  G I +    S++ V+F+++ E LEF  
Sbjct: 83  VLQLRPPPPRERSRT-FQISEEVDAYYNDGWWEGVITEAHENSRFAVFFRTSREQLEFSE 141

Query: 726 SYLRPHREWIDDKWI 770
           + LR HREWI+  W+
Sbjct: 142 NDLRLHREWINGNWV 156


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  170 bits (430), Expect = 6e-40
 Identities = 99/261 (37%), Positives = 138/261 (52%), Gaps = 1/261 (0%)
 Frame = +3

Query: 3   LVEYQTLKTDDE-AELLKESADAPYVRPVPPRIQRIDRFKILEEVDAWYNDGWWIGLINK 179
           LVEYQ L  DD  ++ L E  D  ++RP+PP  +    F + + VDA+Y DGWW G+I +
Sbjct: 48  LVEYQDLLVDDVGSKPLTEVVDTSFLRPLPPP-EADTNFCVNDIVDAFYRDGWWTGVITR 106

Query: 180 IVDSFRYTVYFWTTNEEIEFHHLSLRPHQEWICGKWIISYKKESKLAVKPTVGKLQIPYG 359
           I +  + TV+F    +EI+F    LR H+EW+ GKWI   K+ +                
Sbjct: 107 ISEDSKCTVFFQNPPDEIQFDRSDLRVHKEWVDGKWIRPEKQRT---------------- 150

Query: 360 EGISQMTFSKGAKVEVKSSKKYYEGLWFPAIVLRPPKNGKYLVEFLTLTTVXXXXXXXXX 539
              + + FS GA VEV  +++     WFPAIV R    G Y+V+  +L            
Sbjct: 151 ---TGLIFSPGAAVEVTLNEQSSRDAWFPAIVRREIGLGSYVVQCQSLKNSGEAGVLDVT 207

Query: 540 XXXXMIRPCPPITQSNNQFKPLEQIDAWYRGGWSVGQICKVFNGSKYTVYFKSTNEVLEF 719
                IRP PP  +   +F  LE++DA+Y  GW  G + KV  G +Y V+FK TN   EF
Sbjct: 208 VDNLHIRPSPPRLEGR-KFGLLEKVDAFYDYGWWNGIVTKVLTGRRYVVFFKHTNMEKEF 266

Query: 720 QHSYLRPHREWIDDKWIMATR 782
            HS LRPH EW+D KW+ AT+
Sbjct: 267 IHSDLRPHMEWVDGKWVGATQ 287



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 7/143 (4%)
 Frame = +3

Query: 381 FSKGAKVEVKSSKKYYEGLWFPAIVLRPP------KNGKYLVEFLTLTTVXXXXXXXXXX 542
           FSKG+ VEV S +  ++G W+ A +L  P      K  + LVE+  L             
Sbjct: 8   FSKGSLVEVSSDEDGFKGAWYVATILESPPKSASKKRSRALVEYQDLLVDDVGSKPLTEV 67

Query: 543 XXX-MIRPCPPITQSNNQFKPLEQIDAWYRGGWSVGQICKVFNGSKYTVYFKSTNEVLEF 719
                +RP PP  +++  F   + +DA+YR GW  G I ++   SK TV+F++  + ++F
Sbjct: 68  VDTSFLRPLPP-PEADTNFCVNDIVDAFYRDGWWTGVITRISEDSKCTVFFQNPPDEIQF 126

Query: 720 QHSYLRPHREWIDDKWIMATRRQ 788
             S LR H+EW+D KWI   +++
Sbjct: 127 DRSDLRVHKEWVDGKWIRPEKQR 149


>ref|XP_003555795.1| PREDICTED: uncharacterized protein LOC100805605 [Glycine max]
          Length = 323

 Score =  165 bits (418), Expect = 1e-38
 Identities = 99/269 (36%), Positives = 145/269 (53%), Gaps = 12/269 (4%)
 Frame = +3

Query: 3   LVEYQTLKTDDEA-ELLKESADAPYVRPVPPRIQRIDR-FKILEEVDAWYNDGWWIGLIN 176
           LVEY  L  DD+  + L+E     ++RP+PP     DR FK  +EVDA++NDGWW G I 
Sbjct: 56  LVEYDNLLADDKTTKKLREVLGLRHLRPLPPT--ETDREFKFGDEVDAFHNDGWWEGHIT 113

Query: 177 KIVDSFRYTVYFWTTNEEIEFHHLSLRPHQEWICGKWIISYKKES----------KLAVK 326
           + +++ R+ VYF  + E++ F    LR H+EW+   W+   +++           K+ + 
Sbjct: 114 QELENERFAVYFRVSKEQLVFSKEQLRLHREWLNHDWVPPLQQKQQRQQGNGESKKVLLT 173

Query: 327 PTVGKLQIPYGEGISQMTFSKGAKVEVKSSKKYYEGLWFPAIVLRPPKNGKYLVEFLTLT 506
           P V  ++   G+GI       GA VEV S +  + G WF A V+      K+LVE+  L 
Sbjct: 174 PNVKSVETVKGKGIGV-----GAIVEVSSDEDGFSGAWFAATVVEALGKDKFLVEYHDLL 228

Query: 507 TVXXXXXXXXXXXXXMIRPCPPITQSNNQFKPLEQIDAWYRGGWSVGQICKVFNGSKYTV 686
                           IRP P  T  + QF  L+++DA+Y  GW VG I K    S+Y V
Sbjct: 229 A-DDDSQLREEIDALHIRPHPLDTDVDGQFSILDEVDAFYNDGWWVGVISKALADSRYVV 287

Query: 687 YFKSTNEVLEFQHSYLRPHREWIDDKWIM 773
           YF+S+NE LEF++S LR H++WI  KW+M
Sbjct: 288 YFRSSNEELEFENSQLRLHQDWIGGKWVM 316



 Score =  107 bits (268), Expect = 3e-21
 Identities = 50/100 (50%), Positives = 70/100 (70%)
 Frame = +3

Query: 3   LVEYQTLKTDDEAELLKESADAPYVRPVPPRIQRIDRFKILEEVDAWYNDGWWIGLINKI 182
           LVEY  L  DD+++L +E  DA ++RP P       +F IL+EVDA+YNDGWW+G+I+K 
Sbjct: 221 LVEYHDLLADDDSQL-REEIDALHIRPHPLDTDVDGQFSILDEVDAFYNDGWWVGVISKA 279

Query: 183 VDSFRYTVYFWTTNEEIEFHHLSLRPHQEWICGKWIISYK 302
           +   RY VYF ++NEE+EF +  LR HQ+WI GKW++  K
Sbjct: 280 LADSRYVVYFRSSNEELEFENSQLRLHQDWIGGKWVMPCK 319



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
 Frame = +3

Query: 381 FSKGAKVEVKSSKKYYEGLWFPAIVLRPPKNGKYLVEFLTLTTVXXXXXXXXXXXXXM-I 557
           F  G  VEV S    + G WF   V+R   + ++LVE+  L                  +
Sbjct: 22  FKPGTAVEVSSEDDGFRGSWFTGTVIRRLASERFLVEYDNLLADDKTTKKLREVLGLRHL 81

Query: 558 RPCPPITQSNNQFKPLEQIDAWYRGGWSVGQICKVFNGSKYTVYFKSTNEVLEFQHSYLR 737
           RP PP T+++ +FK  +++DA++  GW  G I +     ++ VYF+ + E L F    LR
Sbjct: 82  RPLPP-TETDREFKFGDEVDAFHNDGWWEGHITQELENERFAVYFRVSKEQLVFSKEQLR 140

Query: 738 PHREWIDDKWI 770
            HREW++  W+
Sbjct: 141 LHREWLNHDWV 151


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