BLASTX nr result

ID: Bupleurum21_contig00033497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033497
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528526.1| PREDICTED: U-box domain-containing protein 1...   227   7e-58
ref|XP_003607915.1| U-box domain-containing protein, partial [Me...   227   7e-58
ref|XP_002526006.1| E3 ubiquitin ligase PUB14, putative [Ricinus...   225   3e-57
emb|CBI26916.3| unnamed protein product [Vitis vinifera]              225   3e-57
ref|XP_002280520.1| PREDICTED: U-box domain-containing protein 1...   225   3e-57

>ref|XP_003528526.1| PREDICTED: U-box domain-containing protein 10-like [Glycine max]
          Length = 654

 Score =  227 bits (579), Expect = 7e-58
 Identities = 112/149 (75%), Positives = 137/149 (91%)
 Frame = -1

Query: 448 RSLITQWCVTHNVEQPAAVIGGRVKKSDGTYCDVNGEMAAIESLVRKLSSRSIEERRAAV 269
           RSLI+QWC+ HN+EQP  +  G++KKSDG++ DV G++AAIE+LVRKLS RS+EERRAAV
Sbjct: 335 RSLISQWCIEHNIEQPTGLTNGKLKKSDGSFRDVTGDIAAIEALVRKLSCRSVEERRAAV 394

Query: 268 GEIRSLSKRSTDNRILIGEAGAIPILVSLLTSDDGITQNNSITSLLNLSIYEHNKGLIML 89
            E+RSLSKRSTDNRILI EAGAIP+LV+LLTS+D +TQ+N++TS+LNLSIYE+NKGLIML
Sbjct: 395 TELRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVLTQDNAVTSILNLSIYENNKGLIML 454

Query: 88  SGAIPSIVQVLRAGSMETKENAAATLFSL 2
           +GAIPSIVQVLRAG+ME +ENAAATLFSL
Sbjct: 455 AGAIPSIVQVLRAGTMEARENAAATLFSL 483



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/110 (35%), Positives = 68/110 (61%)
 Frame = -1

Query: 331 AIESLVRKLSSRSIEERRAAVGEIRSLSKRSTDNRILIGEAGAIPILVSLLTSDDGITQN 152
           AI S+V+ L + ++E R  A   + SLS  + +N+I+IG +GAIP LV LL +     + 
Sbjct: 457 AIPSIVQVLRAGTMEARENAAATLFSLSL-ADENKIIIGASGAIPALVELLQNGSPRGKK 515

Query: 151 NSITSLLNLSIYEHNKGLIMLSGAIPSIVQVLRAGSMETKENAAATLFSL 2
           ++ T+L NL IY+ NKG  + +G I +++++L   S ++  + A T+ S+
Sbjct: 516 DAATALFNLCIYQGNKGRAIRAGIITALLKML-TDSSKSMVDEALTIMSV 564


>ref|XP_003607915.1| U-box domain-containing protein, partial [Medicago truncatula]
           gi|355508970|gb|AES90112.1| U-box domain-containing
           protein, partial [Medicago truncatula]
          Length = 605

 Score =  227 bits (579), Expect = 7e-58
 Identities = 112/149 (75%), Positives = 135/149 (90%)
 Frame = -1

Query: 448 RSLITQWCVTHNVEQPAAVIGGRVKKSDGTYCDVNGEMAAIESLVRKLSSRSIEERRAAV 269
           RSL++QWC+ HN+EQP  +  G++KKSDG++ DV G++AAIE+LVRKLS RS+EE RAAV
Sbjct: 286 RSLVSQWCIEHNIEQPTGLTNGKIKKSDGSFRDVTGDIAAIETLVRKLSCRSVEESRAAV 345

Query: 268 GEIRSLSKRSTDNRILIGEAGAIPILVSLLTSDDGITQNNSITSLLNLSIYEHNKGLIML 89
            EIRSLSKRSTDNRILI EAGAIP+LVSLLTS+D +TQ N++TS+LNLSIYE+NKGLIML
Sbjct: 346 AEIRSLSKRSTDNRILIAEAGAIPVLVSLLTSEDVMTQENAVTSILNLSIYENNKGLIML 405

Query: 88  SGAIPSIVQVLRAGSMETKENAAATLFSL 2
           +GAIPSIVQVLRAG+ME +ENAAATLFSL
Sbjct: 406 AGAIPSIVQVLRAGTMEARENAAATLFSL 434



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/110 (34%), Positives = 66/110 (60%)
 Frame = -1

Query: 331 AIESLVRKLSSRSIEERRAAVGEIRSLSKRSTDNRILIGEAGAIPILVSLLTSDDGITQN 152
           AI S+V+ L + ++E R  A   + SLS  + +N+I+IG +GAI  LV LL +     + 
Sbjct: 408 AIPSIVQVLRAGTMEARENAAATLFSLSL-ADENKIIIGASGAISALVDLLQNGSPRGKK 466

Query: 151 NSITSLLNLSIYEHNKGLIMLSGAIPSIVQVLRAGSMETKENAAATLFSL 2
           ++ T+L NL IY+ NKG  + +G I +++ +L   S ++  + A T+ S+
Sbjct: 467 DAATALFNLCIYQGNKGRAIRAGIITALLNML-TDSSKSMVDEALTIMSV 515


>ref|XP_002526006.1| E3 ubiquitin ligase PUB14, putative [Ricinus communis]
           gi|223534653|gb|EEF36346.1| E3 ubiquitin ligase PUB14,
           putative [Ricinus communis]
          Length = 648

 Score =  225 bits (574), Expect = 3e-57
 Identities = 111/149 (74%), Positives = 136/149 (91%)
 Frame = -1

Query: 448 RSLITQWCVTHNVEQPAAVIGGRVKKSDGTYCDVNGEMAAIESLVRKLSSRSIEERRAAV 269
           RS+ITQWC  HN+EQP+A+  GR+KKSDG++ DV+G++AAI++LVRKLSSRS+EERRAAV
Sbjct: 329 RSVITQWCAQHNIEQPSALANGRIKKSDGSFRDVSGDIAAIQALVRKLSSRSVEERRAAV 388

Query: 268 GEIRSLSKRSTDNRILIGEAGAIPILVSLLTSDDGITQNNSITSLLNLSIYEHNKGLIML 89
            EIRSLSKRSTDNRILI EAGAIP+LV+LLT++D   Q NS+T++LNLSIYE NKGLIML
Sbjct: 389 SEIRSLSKRSTDNRILIAEAGAIPVLVNLLTAEDVPIQENSVTAILNLSIYESNKGLIML 448

Query: 88  SGAIPSIVQVLRAGSMETKENAAATLFSL 2
           +GA+PSIVQ+LRAGS+E +ENAAATLFSL
Sbjct: 449 AGAVPSIVQILRAGSVEARENAAATLFSL 477



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/110 (36%), Positives = 66/110 (60%)
 Frame = -1

Query: 331 AIESLVRKLSSRSIEERRAAVGEIRSLSKRSTDNRILIGEAGAIPILVSLLTSDDGITQN 152
           A+ S+V+ L + S+E R  A   + SLS    +N+I+IG +GAIP LV LL +     + 
Sbjct: 451 AVPSIVQILRAGSVEARENAAATLFSLSL-GDENKIIIGASGAIPALVELLENGSPRGKK 509

Query: 151 NSITSLLNLSIYEHNKGLIMLSGAIPSIVQVLRAGSMETKENAAATLFSL 2
           ++ T+L NL IY+ NKG  + +G IP+++++L   S     + A T+ S+
Sbjct: 510 DAATALFNLCIYQGNKGRAVRAGIIPALLKML-TDSRNCMADEALTILSV 558


>emb|CBI26916.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  225 bits (573), Expect = 3e-57
 Identities = 114/149 (76%), Positives = 134/149 (89%)
 Frame = -1

Query: 448 RSLITQWCVTHNVEQPAAVIGGRVKKSDGTYCDVNGEMAAIESLVRKLSSRSIEERRAAV 269
           RSLITQWC  +N+EQP  ++ GR+KKSDGT+ DV+G++AAIE+LVRKLSS SIEERRAA 
Sbjct: 302 RSLITQWCTKNNIEQPTGLVNGRIKKSDGTFRDVSGDIAAIEALVRKLSSWSIEERRAAA 361

Query: 268 GEIRSLSKRSTDNRILIGEAGAIPILVSLLTSDDGITQNNSITSLLNLSIYEHNKGLIML 89
            EIRSLSKRSTDNRILI EAGAIP LV+LLT+DD +TQ N++TS+LNLSIYE+NKGLIML
Sbjct: 362 TEIRSLSKRSTDNRILIAEAGAIPALVNLLTTDDVVTQENAVTSILNLSIYENNKGLIML 421

Query: 88  SGAIPSIVQVLRAGSMETKENAAATLFSL 2
           +GAIPSIV VLR+GSME +ENAAATLFSL
Sbjct: 422 AGAIPSIVLVLRSGSMEARENAAATLFSL 450



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 41/151 (27%)
 Frame = -1

Query: 331 AIESLVRKLSSRSIEERRAAVGEIRSLSKRSTDNRILIGEAGAIPILVSLLTSDDGITQN 152
           AI S+V  L S S+E R  A   + SLS  + +N+I+IG +GA+P LV LL +     + 
Sbjct: 424 AIPSIVLVLRSGSMEARENAAATLFSLSV-ADENKIIIGASGAMPALVELLQNGSTRGKK 482

Query: 151 NSITSLLNLSIYEHNKGLIMLSG------------------------------------- 83
           ++ T+L NL IY+ NK   + +G                                     
Sbjct: 483 DAATALFNLCIYQGNKSRAVKAGIITALSKMLTDLNNCMVDEALTILSVLSSHQEAKISI 542

Query: 82  ----AIPSIVQVLRAGSMETKENAAATLFSL 2
                IP ++ +LR G    KENAAA L SL
Sbjct: 543 VKASIIPVLIDLLRTGLPRNKENAAAILLSL 573


>ref|XP_002280520.1| PREDICTED: U-box domain-containing protein 10-like [Vitis vinifera]
          Length = 639

 Score =  225 bits (573), Expect = 3e-57
 Identities = 114/149 (76%), Positives = 134/149 (89%)
 Frame = -1

Query: 448 RSLITQWCVTHNVEQPAAVIGGRVKKSDGTYCDVNGEMAAIESLVRKLSSRSIEERRAAV 269
           RSLITQWC  +N+EQP  ++ GR+KKSDGT+ DV+G++AAIE+LVRKLSS SIEERRAA 
Sbjct: 320 RSLITQWCTKNNIEQPTGLVNGRIKKSDGTFRDVSGDIAAIEALVRKLSSWSIEERRAAA 379

Query: 268 GEIRSLSKRSTDNRILIGEAGAIPILVSLLTSDDGITQNNSITSLLNLSIYEHNKGLIML 89
            EIRSLSKRSTDNRILI EAGAIP LV+LLT+DD +TQ N++TS+LNLSIYE+NKGLIML
Sbjct: 380 TEIRSLSKRSTDNRILIAEAGAIPALVNLLTTDDVVTQENAVTSILNLSIYENNKGLIML 439

Query: 88  SGAIPSIVQVLRAGSMETKENAAATLFSL 2
           +GAIPSIV VLR+GSME +ENAAATLFSL
Sbjct: 440 AGAIPSIVLVLRSGSMEARENAAATLFSL 468



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 47/151 (31%), Positives = 67/151 (44%), Gaps = 41/151 (27%)
 Frame = -1

Query: 331 AIESLVRKLSSRSIEERRAAVGEIRSLSKRSTDNRILIGEAGAIPILVSLLTSDDGITQN 152
           AI S+V  L S S+E R  A   + SLS  + +N+I+IG +GA+P LV LL +     + 
Sbjct: 442 AIPSIVLVLRSGSMEARENAAATLFSLSV-ADENKIIIGASGAMPALVELLQNGSTRGKK 500

Query: 151 NSITSLLNLSIYEHNKGLIMLSG------------------------------------- 83
           ++ T+L NL IY+ NK   + +G                                     
Sbjct: 501 DAATALFNLCIYQGNKSRAVKAGIITALSKMLTDLNNCMVDEALTILSVLSSHQEAKISI 560

Query: 82  ----AIPSIVQVLRAGSMETKENAAATLFSL 2
                IP ++ +LR G    KENAAA L SL
Sbjct: 561 VKASIIPVLIDLLRTGLPRNKENAAAILLSL 591


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