BLASTX nr result

ID: Bupleurum21_contig00033496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033496
         (895 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   273   4e-71
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              273   4e-71
ref|XP_002315704.1| predicted protein [Populus trichocarpa] gi|2...   266   4e-69
ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   258   2e-66
ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   257   2e-66

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  273 bits (698), Expect = 4e-71
 Identities = 138/169 (81%), Positives = 152/169 (89%)
 Frame = +3

Query: 387 SNYEEFKWQRVDRLCNDVKLFGEEIINIEELKSIYDFRIDKFQRLSIEAFLKGSSVVVSA 566
           S  +EFKWQRV++LCN+V+ FGEE+I++EEL SIYDFRIDKFQRL+I+AFL+GSSVVVSA
Sbjct: 119 SRSDEFKWQRVEKLCNEVREFGEELIDVEELASIYDFRIDKFQRLAIQAFLRGSSVVVSA 178

Query: 567 PTSSGKTLIXXXXXXXXXXRGRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAIN 746
           PTSSGKTLI          RGRRLFYTTPLKALSNQKFREFRETFGD+NVGLLTGDSA+N
Sbjct: 179 PTSSGKTLIAEAAAVATVSRGRRLFYTTPLKALSNQKFREFRETFGDNNVGLLTGDSAVN 238

Query: 747 KDAQVIIMTTEILRNMLYQSVGMVSSQSGLFQVDVIVLDEVHYLSDISR 893
           KDAQV+IMTTEILRNMLYQSVGMVSS SGLF VDVIVLDEVHYLSDI R
Sbjct: 239 KDAQVLIMTTEILRNMLYQSVGMVSSGSGLFHVDVIVLDEVHYLSDIYR 287


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  273 bits (698), Expect = 4e-71
 Identities = 138/169 (81%), Positives = 152/169 (89%)
 Frame = +3

Query: 387 SNYEEFKWQRVDRLCNDVKLFGEEIINIEELKSIYDFRIDKFQRLSIEAFLKGSSVVVSA 566
           S  +EFKWQRV++LCN+V+ FGEE+I++EEL SIYDFRIDKFQRL+I+AFL+GSSVVVSA
Sbjct: 9   SRSDEFKWQRVEKLCNEVREFGEELIDVEELASIYDFRIDKFQRLAIQAFLRGSSVVVSA 68

Query: 567 PTSSGKTLIXXXXXXXXXXRGRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAIN 746
           PTSSGKTLI          RGRRLFYTTPLKALSNQKFREFRETFGD+NVGLLTGDSA+N
Sbjct: 69  PTSSGKTLIAEAAAVATVSRGRRLFYTTPLKALSNQKFREFRETFGDNNVGLLTGDSAVN 128

Query: 747 KDAQVIIMTTEILRNMLYQSVGMVSSQSGLFQVDVIVLDEVHYLSDISR 893
           KDAQV+IMTTEILRNMLYQSVGMVSS SGLF VDVIVLDEVHYLSDI R
Sbjct: 129 KDAQVLIMTTEILRNMLYQSVGMVSSGSGLFHVDVIVLDEVHYLSDIYR 177


>ref|XP_002315704.1| predicted protein [Populus trichocarpa] gi|222864744|gb|EEF01875.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  266 bits (681), Expect = 4e-69
 Identities = 137/172 (79%), Positives = 150/172 (87%)
 Frame = +3

Query: 378 ELKSNYEEFKWQRVDRLCNDVKLFGEEIINIEELKSIYDFRIDKFQRLSIEAFLKGSSVV 557
           E+ +  +E KWQRV++LCN+VK FG EII+  EL SIYDFRIDKFQRL+IEAFLKGSSVV
Sbjct: 123 EVSNWRKESKWQRVEKLCNEVKEFGNEIIDANELASIYDFRIDKFQRLAIEAFLKGSSVV 182

Query: 558 VSAPTSSGKTLIXXXXXXXXXXRGRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDS 737
           VSAPTSSGKTLI          RGRR+FYTTPLKALSNQKFR+FRETFGD NVGLLTGDS
Sbjct: 183 VSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFRDFRETFGDENVGLLTGDS 242

Query: 738 AINKDAQVIIMTTEILRNMLYQSVGMVSSQSGLFQVDVIVLDEVHYLSDISR 893
           AINKDAQV+IMTTEILRNMLYQS+GMVSS SGLF VDVIVLDEVH+LSDISR
Sbjct: 243 AINKDAQVLIMTTEILRNMLYQSIGMVSSGSGLFHVDVIVLDEVHFLSDISR 294


>ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Cucumis sativus]
          Length = 1168

 Score =  258 bits (658), Expect = 2e-66
 Identities = 130/172 (75%), Positives = 149/172 (86%)
 Frame = +3

Query: 378 ELKSNYEEFKWQRVDRLCNDVKLFGEEIINIEELKSIYDFRIDKFQRLSIEAFLKGSSVV 557
           E+ +  +EFKWQRV++L  +V+ FGE II+++EL S+Y+FRIDKFQRL+++AFL+GSSVV
Sbjct: 119 EISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVV 178

Query: 558 VSAPTSSGKTLIXXXXXXXXXXRGRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDS 737
           VSAPTSSGKTLI          R RRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDS
Sbjct: 179 VSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDS 238

Query: 738 AINKDAQVIIMTTEILRNMLYQSVGMVSSQSGLFQVDVIVLDEVHYLSDISR 893
           A+NKDA V+IMTTEILRNMLYQSVGM +S SGLF VDVIVLDEVHYLSDISR
Sbjct: 239 AVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISR 290


>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Glycine max]
          Length = 1162

 Score =  257 bits (657), Expect = 2e-66
 Identities = 133/178 (74%), Positives = 150/178 (84%)
 Frame = +3

Query: 360 ADVIAPELKSNYEEFKWQRVDRLCNDVKLFGEEIINIEELKSIYDFRIDKFQRLSIEAFL 539
           ADV +P     ++ FKWQRVD+LCN+V+ FG ++I+++EL S+YDFRIDKFQR +I AFL
Sbjct: 104 ADVFSP-----HDGFKWQRVDKLCNEVREFGADLIDVDELASVYDFRIDKFQRQAILAFL 158

Query: 540 KGSSVVVSAPTSSGKTLIXXXXXXXXXXRGRRLFYTTPLKALSNQKFREFRETFGDSNVG 719
           +G SVVVSAPTSSGKTLI          RGRR+FYTTPLKALSNQKFREFRETFG SNVG
Sbjct: 159 RGFSVVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGGSNVG 218

Query: 720 LLTGDSAINKDAQVIIMTTEILRNMLYQSVGMVSSQSGLFQVDVIVLDEVHYLSDISR 893
           LLTGDSA+NKDAQV+IMTTEILRNMLYQSVG VSS SGL  VDVIVLDEVHYLSDISR
Sbjct: 219 LLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGSGLVNVDVIVLDEVHYLSDISR 276


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