BLASTX nr result
ID: Bupleurum21_contig00033496
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00033496 (895 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 273 4e-71 emb|CBI32069.3| unnamed protein product [Vitis vinifera] 273 4e-71 ref|XP_002315704.1| predicted protein [Populus trichocarpa] gi|2... 266 4e-69 ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 258 2e-66 ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 257 2e-66 >ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Vitis vinifera] Length = 1174 Score = 273 bits (698), Expect = 4e-71 Identities = 138/169 (81%), Positives = 152/169 (89%) Frame = +3 Query: 387 SNYEEFKWQRVDRLCNDVKLFGEEIINIEELKSIYDFRIDKFQRLSIEAFLKGSSVVVSA 566 S +EFKWQRV++LCN+V+ FGEE+I++EEL SIYDFRIDKFQRL+I+AFL+GSSVVVSA Sbjct: 119 SRSDEFKWQRVEKLCNEVREFGEELIDVEELASIYDFRIDKFQRLAIQAFLRGSSVVVSA 178 Query: 567 PTSSGKTLIXXXXXXXXXXRGRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAIN 746 PTSSGKTLI RGRRLFYTTPLKALSNQKFREFRETFGD+NVGLLTGDSA+N Sbjct: 179 PTSSGKTLIAEAAAVATVSRGRRLFYTTPLKALSNQKFREFRETFGDNNVGLLTGDSAVN 238 Query: 747 KDAQVIIMTTEILRNMLYQSVGMVSSQSGLFQVDVIVLDEVHYLSDISR 893 KDAQV+IMTTEILRNMLYQSVGMVSS SGLF VDVIVLDEVHYLSDI R Sbjct: 239 KDAQVLIMTTEILRNMLYQSVGMVSSGSGLFHVDVIVLDEVHYLSDIYR 287 >emb|CBI32069.3| unnamed protein product [Vitis vinifera] Length = 1064 Score = 273 bits (698), Expect = 4e-71 Identities = 138/169 (81%), Positives = 152/169 (89%) Frame = +3 Query: 387 SNYEEFKWQRVDRLCNDVKLFGEEIINIEELKSIYDFRIDKFQRLSIEAFLKGSSVVVSA 566 S +EFKWQRV++LCN+V+ FGEE+I++EEL SIYDFRIDKFQRL+I+AFL+GSSVVVSA Sbjct: 9 SRSDEFKWQRVEKLCNEVREFGEELIDVEELASIYDFRIDKFQRLAIQAFLRGSSVVVSA 68 Query: 567 PTSSGKTLIXXXXXXXXXXRGRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDSAIN 746 PTSSGKTLI RGRRLFYTTPLKALSNQKFREFRETFGD+NVGLLTGDSA+N Sbjct: 69 PTSSGKTLIAEAAAVATVSRGRRLFYTTPLKALSNQKFREFRETFGDNNVGLLTGDSAVN 128 Query: 747 KDAQVIIMTTEILRNMLYQSVGMVSSQSGLFQVDVIVLDEVHYLSDISR 893 KDAQV+IMTTEILRNMLYQSVGMVSS SGLF VDVIVLDEVHYLSDI R Sbjct: 129 KDAQVLIMTTEILRNMLYQSVGMVSSGSGLFHVDVIVLDEVHYLSDIYR 177 >ref|XP_002315704.1| predicted protein [Populus trichocarpa] gi|222864744|gb|EEF01875.1| predicted protein [Populus trichocarpa] Length = 351 Score = 266 bits (681), Expect = 4e-69 Identities = 137/172 (79%), Positives = 150/172 (87%) Frame = +3 Query: 378 ELKSNYEEFKWQRVDRLCNDVKLFGEEIINIEELKSIYDFRIDKFQRLSIEAFLKGSSVV 557 E+ + +E KWQRV++LCN+VK FG EII+ EL SIYDFRIDKFQRL+IEAFLKGSSVV Sbjct: 123 EVSNWRKESKWQRVEKLCNEVKEFGNEIIDANELASIYDFRIDKFQRLAIEAFLKGSSVV 182 Query: 558 VSAPTSSGKTLIXXXXXXXXXXRGRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDS 737 VSAPTSSGKTLI RGRR+FYTTPLKALSNQKFR+FRETFGD NVGLLTGDS Sbjct: 183 VSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFRDFRETFGDENVGLLTGDS 242 Query: 738 AINKDAQVIIMTTEILRNMLYQSVGMVSSQSGLFQVDVIVLDEVHYLSDISR 893 AINKDAQV+IMTTEILRNMLYQS+GMVSS SGLF VDVIVLDEVH+LSDISR Sbjct: 243 AINKDAQVLIMTTEILRNMLYQSIGMVSSGSGLFHVDVIVLDEVHFLSDISR 294 >ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Cucumis sativus] Length = 1168 Score = 258 bits (658), Expect = 2e-66 Identities = 130/172 (75%), Positives = 149/172 (86%) Frame = +3 Query: 378 ELKSNYEEFKWQRVDRLCNDVKLFGEEIINIEELKSIYDFRIDKFQRLSIEAFLKGSSVV 557 E+ + +EFKWQRV++L +V+ FGE II+++EL S+Y+FRIDKFQRL+++AFL+GSSVV Sbjct: 119 EISNASQEFKWQRVEKLLGEVREFGEGIIDVDELASVYNFRIDKFQRLAVQAFLRGSSVV 178 Query: 558 VSAPTSSGKTLIXXXXXXXXXXRGRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDS 737 VSAPTSSGKTLI R RRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDS Sbjct: 179 VSAPTSSGKTLIAEAAAVATVARKRRLFYTTPLKALSNQKFREFRETFGDSNVGLLTGDS 238 Query: 738 AINKDAQVIIMTTEILRNMLYQSVGMVSSQSGLFQVDVIVLDEVHYLSDISR 893 A+NKDA V+IMTTEILRNMLYQSVGM +S SGLF VDVIVLDEVHYLSDISR Sbjct: 239 AVNKDAPVLIMTTEILRNMLYQSVGMATSASGLFHVDVIVLDEVHYLSDISR 290 >ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic-like [Glycine max] Length = 1162 Score = 257 bits (657), Expect = 2e-66 Identities = 133/178 (74%), Positives = 150/178 (84%) Frame = +3 Query: 360 ADVIAPELKSNYEEFKWQRVDRLCNDVKLFGEEIINIEELKSIYDFRIDKFQRLSIEAFL 539 ADV +P ++ FKWQRVD+LCN+V+ FG ++I+++EL S+YDFRIDKFQR +I AFL Sbjct: 104 ADVFSP-----HDGFKWQRVDKLCNEVREFGADLIDVDELASVYDFRIDKFQRQAILAFL 158 Query: 540 KGSSVVVSAPTSSGKTLIXXXXXXXXXXRGRRLFYTTPLKALSNQKFREFRETFGDSNVG 719 +G SVVVSAPTSSGKTLI RGRR+FYTTPLKALSNQKFREFRETFG SNVG Sbjct: 159 RGFSVVVSAPTSSGKTLIAEAAAVATVARGRRIFYTTPLKALSNQKFREFRETFGGSNVG 218 Query: 720 LLTGDSAINKDAQVIIMTTEILRNMLYQSVGMVSSQSGLFQVDVIVLDEVHYLSDISR 893 LLTGDSA+NKDAQV+IMTTEILRNMLYQSVG VSS SGL VDVIVLDEVHYLSDISR Sbjct: 219 LLTGDSAVNKDAQVLIMTTEILRNMLYQSVGNVSSGSGLVNVDVIVLDEVHYLSDISR 276