BLASTX nr result

ID: Bupleurum21_contig00033479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033479
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002882076.1| transducin family protein [Arabidopsis lyrat...   110   9e-23
ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255...   110   1e-22
ref|XP_003529883.1| PREDICTED: uncharacterized protein LOC100789...   109   3e-22
ref|NP_182179.3| transducin family protein / WD-40 repeat family...   108   6e-22
gb|AAD20167.1| hypothetical protein [Arabidopsis thaliana]            108   6e-22

>ref|XP_002882076.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297327915|gb|EFH58335.1| transducin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 2458

 Score =  110 bits (276), Expect = 9e-23
 Identities = 46/91 (50%), Positives = 65/91 (71%)
 Frame = -3

Query: 274 NKKIIVSCSVIEINQEMNGTLGSDIHVRWATEINGIYNTSKEASQYFPSEYYQPDGVGKC 95
           +KK     +VIEINQ ++G LG D+ + W T   GI  T++  +Q+F  E Y  + VGKC
Sbjct: 299 HKKSFCVAAVIEINQVLDGCLGRDLFLFWGTRTGGILKTTEGTNQFFSMEKYDHENVGKC 358

Query: 94  EWVIGFGPQRLATLWAIHCLDDVTPLRYPRV 2
           EW++G+GP  LATLWA+HCLDD++P+R+PRV
Sbjct: 359 EWLVGYGPGNLATLWAVHCLDDISPMRFPRV 389


>ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255258 [Vitis vinifera]
          Length = 2572

 Score =  110 bits (275), Expect = 1e-22
 Identities = 47/83 (56%), Positives = 64/83 (77%)
 Frame = -3

Query: 250 SVIEINQEMNGTLGSDIHVRWATEINGIYNTSKEASQYFPSEYYQPDGVGKCEWVIGFGP 71
           +VIEINQ +NGTLG+++ V WATEI GI  T + A+Q F +++++ +  GKCEW+IGFGP
Sbjct: 330 AVIEINQTLNGTLGTNVFVTWATEIAGIIKTGEGANQIFSTKHHEHEKAGKCEWLIGFGP 389

Query: 70  QRLATLWAIHCLDDVTPLRYPRV 2
               T WAIHCLDD +P+R+PRV
Sbjct: 390 GMFLTFWAIHCLDDFSPVRFPRV 412


>ref|XP_003529883.1| PREDICTED: uncharacterized protein LOC100789935 [Glycine max]
          Length = 2468

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/83 (57%), Positives = 61/83 (73%)
 Frame = -3

Query: 250 SVIEINQEMNGTLGSDIHVRWATEINGIYNTSKEASQYFPSEYYQPDGVGKCEWVIGFGP 71
           +VIEINQ +N TL SDI VRW TE  G++ T KEA Q F  E ++ D V  C+W++GFGP
Sbjct: 301 AVIEINQSLNATLSSDIFVRWGTEFEGLFQTDKEAKQVFSKEGFEHD-VRNCDWLVGFGP 359

Query: 70  QRLATLWAIHCLDDVTPLRYPRV 2
             L + WA+HCLDDV+PLR+PRV
Sbjct: 360 GMLLSFWAVHCLDDVSPLRFPRV 382


>ref|NP_182179.3| transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana] gi|330255627|gb|AEC10721.1|
           transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana]
          Length = 2513

 Score =  108 bits (269), Expect = 6e-22
 Identities = 45/91 (49%), Positives = 63/91 (69%)
 Frame = -3

Query: 274 NKKIIVSCSVIEINQEMNGTLGSDIHVRWATEINGIYNTSKEASQYFPSEYYQPDGVGKC 95
           +KK     +VIEINQ ++G LG D+ + W T   GI+ T +  +Q F  E Y  + VGKC
Sbjct: 297 HKKSFCVAAVIEINQVLDGCLGRDLFLFWGTRTGGIFKTIEGTNQVFSMEKYDNENVGKC 356

Query: 94  EWVIGFGPQRLATLWAIHCLDDVTPLRYPRV 2
           EW++G+GP   ATLWA+HCLDD++P+R+PRV
Sbjct: 357 EWLVGYGPGNFATLWAVHCLDDISPMRFPRV 387


>gb|AAD20167.1| hypothetical protein [Arabidopsis thaliana]
          Length = 2480

 Score =  108 bits (269), Expect = 6e-22
 Identities = 45/91 (49%), Positives = 63/91 (69%)
 Frame = -3

Query: 274 NKKIIVSCSVIEINQEMNGTLGSDIHVRWATEINGIYNTSKEASQYFPSEYYQPDGVGKC 95
           +KK     +VIEINQ ++G LG D+ + W T   GI+ T +  +Q F  E Y  + VGKC
Sbjct: 297 HKKSFCVAAVIEINQVLDGCLGRDLFLFWGTRTGGIFKTIEGTNQVFSMEKYDNENVGKC 356

Query: 94  EWVIGFGPQRLATLWAIHCLDDVTPLRYPRV 2
           EW++G+GP   ATLWA+HCLDD++P+R+PRV
Sbjct: 357 EWLVGYGPGNFATLWAVHCLDDISPMRFPRV 387


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