BLASTX nr result

ID: Bupleurum21_contig00033476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033476
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002878131.1| binding protein [Arabidopsis lyrata subsp. l...   201   7e-50
ref|XP_002308898.1| condensin complex components subunit [Populu...   201   7e-50
ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis tha...   194   6e-48
ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thalia...   194   6e-48
emb|CAB72176.1| putative protein [Arabidopsis thaliana]               194   6e-48

>ref|XP_002878131.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297323969|gb|EFH54390.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1325

 Score =  201 bits (510), Expect = 7e-50
 Identities = 99/129 (76%), Positives = 112/129 (86%)
 Frame = -2

Query: 387  NPVETAKNLLNLAIDSNIGDLAALEFIVAALVSKGDXXXXXXXSLWDFFGFNVSGTTAEQ 208
            NPVETAK LLNLAIDSNIGD AALEFIV ALVSKG+       +LWDFFGFN++GTTAEQ
Sbjct: 627  NPVETAKQLLNLAIDSNIGDQAALEFIVNALVSKGEISSSTTSALWDFFGFNINGTTAEQ 686

Query: 207  SRGALSVLCMAAKSSPEVFSSHLQDIVDIGWGRWAKVDPLLARTACVALQRLSVEDQKKL 28
            SRGALS+LCMAAKSSP +  SH+QDI+DIG+GRWAKV+PLLARTAC A+QRLS ED+KKL
Sbjct: 687  SRGALSILCMAAKSSPRILGSHIQDIIDIGFGRWAKVEPLLARTACTAIQRLSEEDRKKL 746

Query: 27   LSKSGSRLF 1
            L  +GSRLF
Sbjct: 747  LLNNGSRLF 755


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
            gi|222854874|gb|EEE92421.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  201 bits (510), Expect = 7e-50
 Identities = 100/129 (77%), Positives = 114/129 (88%)
 Frame = -2

Query: 387  NPVETAKNLLNLAIDSNIGDLAALEFIVAALVSKGDXXXXXXXSLWDFFGFNVSGTTAEQ 208
            NP++TAKNLL+LAIDSNIGDLAALEFIV ALVSKGD       +LWDFF FN+SGTT EQ
Sbjct: 631  NPLDTAKNLLDLAIDSNIGDLAALEFIVNALVSKGDISTSTISALWDFFCFNISGTTPEQ 690

Query: 207  SRGALSVLCMAAKSSPEVFSSHLQDIVDIGWGRWAKVDPLLARTACVALQRLSVEDQKKL 28
            SRGALSVLCMAAK+SP V  SHLQDI+DIG+GRWAKVDPLLARTAC+A+QRLS ED+KKL
Sbjct: 691  SRGALSVLCMAAKASPGVLGSHLQDIIDIGFGRWAKVDPLLARTACIAIQRLSEEDKKKL 750

Query: 27   LSKSGSRLF 1
            L+ +GSR+F
Sbjct: 751  LASNGSRVF 759


>ref|NP_001190114.1| condensin complex subunit 1 [Arabidopsis thaliana]
            gi|332646086|gb|AEE79607.1| condensin complex subunit 1
            [Arabidopsis thaliana]
          Length = 1415

 Score =  194 bits (493), Expect = 6e-48
 Identities = 96/129 (74%), Positives = 109/129 (84%)
 Frame = -2

Query: 387  NPVETAKNLLNLAIDSNIGDLAALEFIVAALVSKGDXXXXXXXSLWDFFGFNVSGTTAEQ 208
            NPV+TAK LLNLAIDSNIGD AALEFIV ALVSKG+       +LWDFF FN++GTTAEQ
Sbjct: 624  NPVDTAKQLLNLAIDSNIGDQAALEFIVNALVSKGEISSSTTSALWDFFCFNINGTTAEQ 683

Query: 207  SRGALSVLCMAAKSSPEVFSSHLQDIVDIGWGRWAKVDPLLARTACVALQRLSVEDQKKL 28
            SRGALS+LCMAAKSSP +  SH+QDI+DIG+GRWAKV+PLLARTAC  +QR S ED+KKL
Sbjct: 684  SRGALSILCMAAKSSPRILGSHIQDIIDIGFGRWAKVEPLLARTACTVIQRFSEEDRKKL 743

Query: 27   LSKSGSRLF 1
            L  SGSRLF
Sbjct: 744  LLSSGSRLF 752


>ref|NP_191265.2| condensin complex subunit 1 [Arabidopsis thaliana]
            gi|332646085|gb|AEE79606.1| condensin complex subunit 1
            [Arabidopsis thaliana]
          Length = 1396

 Score =  194 bits (493), Expect = 6e-48
 Identities = 96/129 (74%), Positives = 109/129 (84%)
 Frame = -2

Query: 387  NPVETAKNLLNLAIDSNIGDLAALEFIVAALVSKGDXXXXXXXSLWDFFGFNVSGTTAEQ 208
            NPV+TAK LLNLAIDSNIGD AALEFIV ALVSKG+       +LWDFF FN++GTTAEQ
Sbjct: 624  NPVDTAKQLLNLAIDSNIGDQAALEFIVNALVSKGEISSSTTSALWDFFCFNINGTTAEQ 683

Query: 207  SRGALSVLCMAAKSSPEVFSSHLQDIVDIGWGRWAKVDPLLARTACVALQRLSVEDQKKL 28
            SRGALS+LCMAAKSSP +  SH+QDI+DIG+GRWAKV+PLLARTAC  +QR S ED+KKL
Sbjct: 684  SRGALSILCMAAKSSPRILGSHIQDIIDIGFGRWAKVEPLLARTACTVIQRFSEEDRKKL 743

Query: 27   LSKSGSRLF 1
            L  SGSRLF
Sbjct: 744  LLSSGSRLF 752


>emb|CAB72176.1| putative protein [Arabidopsis thaliana]
          Length = 1439

 Score =  194 bits (493), Expect = 6e-48
 Identities = 96/129 (74%), Positives = 109/129 (84%)
 Frame = -2

Query: 387  NPVETAKNLLNLAIDSNIGDLAALEFIVAALVSKGDXXXXXXXSLWDFFGFNVSGTTAEQ 208
            NPV+TAK LLNLAIDSNIGD AALEFIV ALVSKG+       +LWDFF FN++GTTAEQ
Sbjct: 624  NPVDTAKQLLNLAIDSNIGDQAALEFIVNALVSKGEISSSTTSALWDFFCFNINGTTAEQ 683

Query: 207  SRGALSVLCMAAKSSPEVFSSHLQDIVDIGWGRWAKVDPLLARTACVALQRLSVEDQKKL 28
            SRGALS+LCMAAKSSP +  SH+QDI+DIG+GRWAKV+PLLARTAC  +QR S ED+KKL
Sbjct: 684  SRGALSILCMAAKSSPRILGSHIQDIIDIGFGRWAKVEPLLARTACTVIQRFSEEDRKKL 743

Query: 27   LSKSGSRLF 1
            L  SGSRLF
Sbjct: 744  LLSSGSRLF 752


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