BLASTX nr result

ID: Bupleurum21_contig00033473 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033473
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]              280   7e-74
ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis v...   280   1e-73
emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]   280   1e-73
gb|ADR71240.1| 60S ribosomal protein L3B [Hevea brasiliensis]         279   1e-73
ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus ...   278   3e-73

>gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
          Length = 389

 Score =  280 bits (717), Expect = 7e-74
 Identities = 130/144 (90%), Positives = 138/144 (95%)
 Frame = -3

Query: 433 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTG 254
           VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKK+YKLGK G
Sbjct: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKVYKLGKAG 292

Query: 253 HESHTAVTEFDRTEKDINPMGGFPHYGVVKDDYLVIKGCCVGPKKRVVTLRQSLLTQTSR 74
            ESH AVT+FDRTEKDI PMGGFPHYGVVKDDYL+IKGCCVGPKKRVVTLRQSLL QTSR
Sbjct: 293 QESHAAVTDFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLNQTSR 352

Query: 73  LAIDVIKLKFIDTANKFGHGRFQT 2
           +A++ IKLKFIDT++KFGHGRFQT
Sbjct: 353 VALEEIKLKFIDTSSKFGHGRFQT 376


>ref|XP_002263053.2| PREDICTED: 60S ribosomal protein L3 [Vitis vinifera]
           gi|297739519|emb|CBI29701.3| unnamed protein product
           [Vitis vinifera]
          Length = 389

 Score =  280 bits (715), Expect = 1e-73
 Identities = 130/144 (90%), Positives = 140/144 (97%)
 Frame = -3

Query: 433 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTG 254
           VTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYK+GKTG
Sbjct: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTG 292

Query: 253 HESHTAVTEFDRTEKDINPMGGFPHYGVVKDDYLVIKGCCVGPKKRVVTLRQSLLTQTSR 74
            ESH+A+TEFDRTEKDI PMGGFPHYGVVKDDYL+IKGCCVGPKKRVVTLRQSLL QTSR
Sbjct: 293 QESHSAMTEFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSR 352

Query: 73  LAIDVIKLKFIDTANKFGHGRFQT 2
           +A++ IKLKFIDT++KFGHGRFQT
Sbjct: 353 VAMEEIKLKFIDTSSKFGHGRFQT 376


>emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
          Length = 389

 Score =  280 bits (715), Expect = 1e-73
 Identities = 130/144 (90%), Positives = 140/144 (97%)
 Frame = -3

Query: 433 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTG 254
           VTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYK+GKTG
Sbjct: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTG 292

Query: 253 HESHTAVTEFDRTEKDINPMGGFPHYGVVKDDYLVIKGCCVGPKKRVVTLRQSLLTQTSR 74
            ESH+A+TEFDRTEKDI PMGGFPHYGVVKDDYL+IKGCCVGPKKRVVTLRQSLL QTSR
Sbjct: 293 QESHSAMTEFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKRVVTLRQSLLKQTSR 352

Query: 73  LAIDVIKLKFIDTANKFGHGRFQT 2
           +A++ IKLKFIDT++KFGHGRFQT
Sbjct: 353 VAMEEIKLKFIDTSSKFGHGRFQT 376


>gb|ADR71240.1| 60S ribosomal protein L3B [Hevea brasiliensis]
          Length = 389

 Score =  279 bits (714), Expect = 1e-73
 Identities = 128/144 (88%), Positives = 140/144 (97%)
 Frame = -3

Query: 433 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTG 254
           VTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYKLGK G
Sbjct: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAG 292

Query: 253 HESHTAVTEFDRTEKDINPMGGFPHYGVVKDDYLVIKGCCVGPKKRVVTLRQSLLTQTSR 74
            ESHTA+T++DRTEKDI PMGGFPHYGVVKDDY++IKGCCVGPKKRVVTLR+SLLTQTSR
Sbjct: 293 QESHTAITDYDRTEKDITPMGGFPHYGVVKDDYIMIKGCCVGPKKRVVTLRRSLLTQTSR 352

Query: 73  LAIDVIKLKFIDTANKFGHGRFQT 2
           +A++ IKLKFIDT++KFGHGRFQT
Sbjct: 353 VALEEIKLKFIDTSSKFGHGRFQT 376


>ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
           gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3,
           putative [Ricinus communis]
          Length = 389

 Score =  278 bits (711), Expect = 3e-73
 Identities = 129/144 (89%), Positives = 139/144 (96%)
 Frame = -3

Query: 433 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSYTVARAGQNGYHHRTEMNKKIYKLGKTG 254
           VTRWGVTRLPRKTHRGLRKVACIGAWHPARVS+TVARAGQNGYHHRTEMNKKIYKLGK G
Sbjct: 233 VTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKGG 292

Query: 253 HESHTAVTEFDRTEKDINPMGGFPHYGVVKDDYLVIKGCCVGPKKRVVTLRQSLLTQTSR 74
            ESHTA+TE+DRTEKDI P+GGFPHYGVVKDDYL+IKGCCVGPKKRVVTLRQSLL QTSR
Sbjct: 293 QESHTAITEYDRTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKRVVTLRQSLLKQTSR 352

Query: 73  LAIDVIKLKFIDTANKFGHGRFQT 2
           +A++ IKLKFIDT++KFGHGRFQT
Sbjct: 353 VALEEIKLKFIDTSSKFGHGRFQT 376


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