BLASTX nr result

ID: Bupleurum21_contig00033464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033464
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]          172   2e-41
emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   171   4e-41
emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]   167   6e-40
emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]   156   1e-36
gb|AAT38766.2| Polyprotein, putative [Solanum demissum]               150   1e-34

>gb|AAK70407.1|AF369930_2 pol polyprotein [Citrus x paradisi]
          Length = 701

 Score =  172 bits (437), Expect = 2e-41
 Identities = 83/108 (76%), Positives = 93/108 (86%)
 Frame = -1

Query: 351 LKSKDEAIDKFKIYKEEVETQQNEKIKTIHSDRGGEYVEPFGEFCSQHGIIHEVTAPYSP 172
           LKSKDEA+DKF +YK EVE Q N KIK + SDRGGEYV PF   C Q GIIH+VTAPYSP
Sbjct: 555 LKSKDEALDKFILYKNEVENQLNRKIKELRSDRGGEYVVPFMSLCEQSGIIHQVTAPYSP 614

Query: 171 QSNGVAERKNRTLKEMMNAMLLSSGLPQSMWGEAILSANHLLNMMIRK 28
           QSNG+AERKNRTLKEMMNAML+SSGLPQ+MWGEA+LSAN+LLN + RK
Sbjct: 615 QSNGIAERKNRTLKEMMNAMLISSGLPQNMWGEAVLSANYLLNKIPRK 662


>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  171 bits (434), Expect = 4e-41
 Identities = 82/108 (75%), Positives = 94/108 (87%)
 Frame = -1

Query: 351 LKSKDEAIDKFKIYKEEVETQQNEKIKTIHSDRGGEYVEPFGEFCSQHGIIHEVTAPYSP 172
           LKSKDEAI+KF +YK EVE Q N+KIK + SDRGGEY  PF + C+QHGIIHE TAPYSP
Sbjct: 566 LKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTAPYSP 625

Query: 171 QSNGVAERKNRTLKEMMNAMLLSSGLPQSMWGEAILSANHLLNMMIRK 28
           QSNGVAERKNRTLKEMMNAML+SS LPQ+MWGEAIL+AN+LLN + +K
Sbjct: 626 QSNGVAERKNRTLKEMMNAMLISSSLPQNMWGEAILTANYLLNKVPKK 673


>emb|CAN73567.1| hypothetical protein VITISV_003451 [Vitis vinifera]
          Length = 1277

 Score =  167 bits (424), Expect = 6e-40
 Identities = 80/108 (74%), Positives = 92/108 (85%)
 Frame = -1

Query: 351 LKSKDEAIDKFKIYKEEVETQQNEKIKTIHSDRGGEYVEPFGEFCSQHGIIHEVTAPYSP 172
           LKSKDEAI+KF +YK EVE Q N+KIK + SDRGGEY  PF + C+QHGIIHE T PYSP
Sbjct: 566 LKSKDEAIEKFVLYKTEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTTPYSP 625

Query: 171 QSNGVAERKNRTLKEMMNAMLLSSGLPQSMWGEAILSANHLLNMMIRK 28
           QSNGVAERKNRTLKEMMNAML+S  LPQ+MWGEAIL+AN+LLN + +K
Sbjct: 626 QSNGVAERKNRTLKEMMNAMLISFSLPQNMWGEAILTANYLLNKVPKK 673


>emb|CAN76565.1| hypothetical protein VITISV_010942 [Vitis vinifera]
          Length = 839

 Score =  156 bits (395), Expect = 1e-36
 Identities = 76/108 (70%), Positives = 87/108 (80%)
 Frame = -1

Query: 351 LKSKDEAIDKFKIYKEEVETQQNEKIKTIHSDRGGEYVEPFGEFCSQHGIIHEVTAPYSP 172
           L+ KDEA+D FK YK EVE Q ++ IK I SDRGGEY  PFGEFCS+HGIIH+  APYSP
Sbjct: 222 LRRKDEALDVFKHYKNEVENQLSKNIKAIKSDRGGEYDAPFGEFCSEHGIIHQTIAPYSP 281

Query: 171 QSNGVAERKNRTLKEMMNAMLLSSGLPQSMWGEAILSANHLLNMMIRK 28
           QSN VAE KN TLKEMMNAML+SSGLPQ++W EAIL ANH+LN +  K
Sbjct: 282 QSNSVAECKNLTLKEMMNAMLISSGLPQNLWREAILFANHILNKIPHK 329


>gb|AAT38766.2| Polyprotein, putative [Solanum demissum]
          Length = 1355

 Score =  150 bits (379), Expect = 1e-34
 Identities = 72/107 (67%), Positives = 86/107 (80%)
 Frame = -1

Query: 351 LKSKDEAIDKFKIYKEEVETQQNEKIKTIHSDRGGEYVEPFGEFCSQHGIIHEVTAPYSP 172
           L SKDEAID FK YK EVE Q N KIK I SDRGGEY   F E C ++GIIH+ TAPY+P
Sbjct: 573 LNSKDEAIDAFKQYKNEVENQLNLKIKMIRSDRGGEYESLFAEICLEYGIIHQTTAPYTP 632

Query: 171 QSNGVAERKNRTLKEMMNAMLLSSGLPQSMWGEAILSANHLLNMMIR 31
           QSNG+AERKNRTLKEMMNA+++SSG P+++WGE IL+AN +LN + R
Sbjct: 633 QSNGLAERKNRTLKEMMNALIISSGSPRNLWGETILTANKILNRVPR 679


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