BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033449
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   112   2e-23
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...   112   4e-23
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                111   5e-23
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   108   5e-22
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   108   5e-22

>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  112 bits (281), Expect = 2e-23
 Identities = 53/126 (42%), Positives = 80/126 (63%)
 Frame = +3

Query: 3    DVLAGXXXXXXXXXXPRAINSTAIALIPKQDNPSAISHFRPISCCNVLYKCVAKVLAGRL 182
            D +A           P+ +N+T +ALIPK+D    +  +RPISCCNVLYK ++K+LA RL
Sbjct: 788  DFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRL 847

Query: 183  KSVLNQIISENQATFISKRVIGDHILLAQSLCHNYHTSYGSPRYTIKLDIRKAFDSIN*D 362
            K +L   I +NQ+ F+ +R++ +++LLA  L  +YH    +PR  +K+DI KAFDS+   
Sbjct: 848  KLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQ 907

Query: 363  FLLKAM 380
            FLL  +
Sbjct: 908  FLLNTL 913


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/111 (47%), Positives = 77/111 (69%)
 Frame = +3

Query: 48   PRAINSTAIALIPKQDNPSAISHFRPISCCNVLYKCVAKVLAGRLKSVLNQIISENQATF 227
            P+ +NST +ALIPK+     +  +RPISCCNVLYK ++K+LA RLK +L + I+ NQ+ F
Sbjct: 772  PKGLNSTILALIPKRTYAKEMKDYRPISCCNVLYKAISKLLANRLKCLLPEFIAPNQSAF 831

Query: 228  ISKRVIGDHILLAQSLCHNYHTSYGSPRYTIKLDIRKAFDSIN*DFLLKAM 380
            IS R++ +++LLA  L  +YH    SPR  +K+D+ KAFDS+   FLL  +
Sbjct: 832  ISDRLLMENLLLASELVKDYHKDGLSPRCAMKIDLSKAFDSVQWPFLLNTL 882


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  111 bits (278), Expect = 5e-23
 Identities = 52/126 (41%), Positives = 81/126 (64%)
 Frame = +3

Query: 3   DVLAGXXXXXXXXXXPRAINSTAIALIPKQDNPSAISHFRPISCCNVLYKCVAKVLAGRL 182
           D +A           P+ +N+T +ALIPK+D  + +  +RPISCCNV+YK ++K++A RL
Sbjct: 64  DFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYKVISKIIANRL 123

Query: 183 KSVLNQIISENQATFISKRVIGDHILLAQSLCHNYHTSYGSPRYTIKLDIRKAFDSIN*D 362
           K +L   I +NQ+ F+ +R++ +++LLA  L  +YH    SPR  +K+DI KAFDS+   
Sbjct: 124 KVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQ 183

Query: 363 FLLKAM 380
           FLL  +
Sbjct: 184 FLLNTL 189


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/106 (47%), Positives = 75/106 (70%)
 Frame = +3

Query: 60  NSTAIALIPKQDNPSAISHFRPISCCNVLYKCVAKVLAGRLKSVLNQIISENQATFISKR 239
           N+T + LIPK  N S ++ FRPISC N LYK +AK+L  RLK +LN++IS +Q+ F+  R
Sbjct: 505 NATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGR 564

Query: 240 VIGDHILLAQSLCHNYHTSYGSPRYTIKLDIRKAFDSIN*DFLLKA 377
           ++ +++LLA  + H Y+T   S R  +K+D+RKAFDS+  DF++ A
Sbjct: 565 LLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISA 610


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 893

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/106 (47%), Positives = 75/106 (70%)
 Frame = +3

Query: 60  NSTAIALIPKQDNPSAISHFRPISCCNVLYKCVAKVLAGRLKSVLNQIISENQATFISKR 239
           N+T + LIPK  N S ++ FRPISC N LYK +AK+L  RLK +LN++IS +Q+ F+  R
Sbjct: 505 NATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGR 564

Query: 240 VIGDHILLAQSLCHNYHTSYGSPRYTIKLDIRKAFDSIN*DFLLKA 377
           ++ +++LLA  + H Y+T   S R  +K+D+RKAFDS+  DF++ A
Sbjct: 565 LLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWDFIISA 610