BLASTX nr result

ID: Bupleurum21_contig00033440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033440
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]   109   2e-22
ref|XP_002325877.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002325876.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002268955.1| PREDICTED: uncharacterized protein LOC100242...   107   1e-21
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]   106   2e-21

>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score =  109 bits (273), Expect = 2e-22
 Identities = 56/124 (45%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
 Frame = -1

Query: 371 IEKLNNNNYGSWSTRIKFYLLGQDLWDVVNGSDTTPPREARXXXXXXXXXXXTPARPDAT 192
           I+KLNN NY +WST +  Y+ GQDLW+VVNGS+ T P+                      
Sbjct: 10  IKKLNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQPK---------------------- 47

Query: 191 PQRPVADPE-ILKKWKVKAGKAMYALTVAVEDEFLRRIKDTQTPKEAWDILSGIFSKKND 15
               V D   IL+KWK+KAGKAM+AL   +E++ L  I+D +TP EAW+  + +FSKKND
Sbjct: 48  ----VEDANGILRKWKIKAGKAMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKND 103

Query: 14  TKLQ 3
           T+LQ
Sbjct: 104 TRLQ 107


>ref|XP_002325877.1| predicted protein [Populus trichocarpa] gi|222862752|gb|EEF00259.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/123 (43%), Positives = 73/123 (59%)
 Frame = -1

Query: 371 IEKLNNNNYGSWSTRIKFYLLGQDLWDVVNGSDTTPPREARXXXXXXXXXXXTPARPDAT 192
           I+KLN+ NY +WST +  Y+ GQDLW+VVNGS+T  P EA                    
Sbjct: 10  IKKLNHTNYNTWSTCMMSYMQGQDLWEVVNGSETVQP-EAEDTNGT-------------- 54

Query: 191 PQRPVADPEILKKWKVKAGKAMYALTVAVEDEFLRRIKDTQTPKEAWDILSGIFSKKNDT 12
                     L+KWK+K GKA++AL   ++D+ L  I+D +TPKEAWD  + +FSKKNDT
Sbjct: 55  ----------LRKWKIKVGKALFALKTTIDDDMLEHIRDVKTPKEAWDTFAKLFSKKNDT 104

Query: 11  KLQ 3
           +LQ
Sbjct: 105 RLQ 107


>ref|XP_002325876.1| predicted protein [Populus trichocarpa] gi|222862751|gb|EEF00258.1|
           predicted protein [Populus trichocarpa]
          Length = 264

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/123 (43%), Positives = 73/123 (59%)
 Frame = -1

Query: 371 IEKLNNNNYGSWSTRIKFYLLGQDLWDVVNGSDTTPPREARXXXXXXXXXXXTPARPDAT 192
           I+KLN+ NY +WST +  Y+ GQDLW+VVNGS+T  P EA                    
Sbjct: 10  IKKLNHTNYNTWSTCMMSYMQGQDLWEVVNGSETVQP-EAEDTNGT-------------- 54

Query: 191 PQRPVADPEILKKWKVKAGKAMYALTVAVEDEFLRRIKDTQTPKEAWDILSGIFSKKNDT 12
                     L+KWK+K GKA++AL   ++D+ L  I+D +TPKEAWD  + +FSKKNDT
Sbjct: 55  ----------LRKWKIKVGKALFALKTTIDDDMLEHIRDVKTPKEAWDTFAKLFSKKNDT 104

Query: 11  KLQ 3
           +LQ
Sbjct: 105 RLQ 107


>ref|XP_002268955.1| PREDICTED: uncharacterized protein LOC100242965 [Vitis vinifera]
          Length = 136

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/123 (44%), Positives = 74/123 (60%)
 Frame = -1

Query: 371 IEKLNNNNYGSWSTRIKFYLLGQDLWDVVNGSDTTPPREARXXXXXXXXXXXTPARPDAT 192
           I+K+NN NY +WST +  Y+ GQDLW+VVNGS+ T P+                   DA 
Sbjct: 10  IKKVNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQPKTE-----------------DAN 52

Query: 191 PQRPVADPEILKKWKVKAGKAMYALTVAVEDEFLRRIKDTQTPKEAWDILSGIFSKKNDT 12
                    IL KWK+KAGKAM+AL   +E++ L  I+D +TP EAW+  + +FSKKNDT
Sbjct: 53  G--------ILWKWKIKAGKAMFALKTTIEEDVLEHIRDAETPYEAWNTFTKLFSKKNDT 104

Query: 11  KLQ 3
           +LQ
Sbjct: 105 RLQ 107


>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
          Length = 1194

 Score =  106 bits (265), Expect = 2e-21
 Identities = 55/123 (44%), Positives = 73/123 (59%)
 Frame = -1

Query: 371 IEKLNNNNYGSWSTRIKFYLLGQDLWDVVNGSDTTPPREARXXXXXXXXXXXTPARPDAT 192
           I+KLNN NY +WST +  Y+ GQDLW+VVNGS+ T P EA                    
Sbjct: 10  IKKLNNQNYNTWSTCMMSYMQGQDLWEVVNGSEITQP-EAEDVNG--------------- 53

Query: 191 PQRPVADPEILKKWKVKAGKAMYALTVAVEDEFLRRIKDTQTPKEAWDILSGIFSKKNDT 12
                    IL+KWK+K GKAM+AL   +E++ L  I+D +TP EAW+  + +FSKKNDT
Sbjct: 54  ---------ILRKWKIKXGKAMFALKTTIEEDVLEHIRDAKTPYEAWNTFTKLFSKKNDT 104

Query: 11  KLQ 3
           +LQ
Sbjct: 105 RLQ 107


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