BLASTX nr result
ID: Bupleurum21_contig00033430
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00033430 (464 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_849549.1| zinc finger protein LSD1 [Arabidopsis thaliana]... 54 1e-05 ref|XP_002869934.1| hypothetical protein ARALYDRAFT_492829 [Arab... 54 1e-05 ref|NP_001154257.1| zinc finger protein LSD1 [Arabidopsis thalia... 54 1e-05 dbj|BAH57095.1| AT4G20380 [Arabidopsis thaliana] 54 1e-05 ref|NP_849548.1| zinc finger protein LSD1 [Arabidopsis thaliana]... 54 1e-05 >ref|NP_849549.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|145333512|ref|NP_001078413.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|75101274|sp|P94077.1|LSD1_ARATH RecName: Full=Protein LSD1; AltName: Full=Protein CHILLING SENSITIVE 4; AltName: Full=Protein LESION SIMULATING DISEASE 1; Short=AtLSD1; AltName: Full=Putative zinc finger LSD1 gi|1872521|gb|AAC49660.1| zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|1872523|gb|AAC49661.1| zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|5262161|emb|CAB45804.1| zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|7268834|emb|CAB79038.1| zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|332658915|gb|AEE84315.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|332658921|gb|AEE84321.1| zinc finger protein LSD1 [Arabidopsis thaliana] Length = 189 Score = 54.3 bits (129), Expect = 1e-05 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 6/60 (10%) Frame = +3 Query: 3 GSQSVKCAICQYVTNTNIGNTSAPVPAGRPNG------XXXXXXXXXXXXVIVQNPVSVD 164 G+ SVKCA+CQ+VTN N+ N P+P RPNG V+V+NP+SVD Sbjct: 112 GASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVVVENPMSVD 171 >ref|XP_002869934.1| hypothetical protein ARALYDRAFT_492829 [Arabidopsis lyrata subsp. lyrata] gi|297315770|gb|EFH46193.1| hypothetical protein ARALYDRAFT_492829 [Arabidopsis lyrata subsp. lyrata] Length = 184 Score = 54.3 bits (129), Expect = 1e-05 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 6/60 (10%) Frame = +3 Query: 3 GSQSVKCAICQYVTNTNIGNTSAPVPAGRPNG------XXXXXXXXXXXXVIVQNPVSVD 164 G+ SVKCA+CQ+VTN N+ N P+P RPNG V+V+NP+SVD Sbjct: 107 GASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGSACPGTMPSSTPPSQTQTVVVENPMSVD 166 >ref|NP_001154257.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|332658922|gb|AEE84322.1| zinc finger protein LSD1 [Arabidopsis thaliana] Length = 210 Score = 54.3 bits (129), Expect = 1e-05 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 6/60 (10%) Frame = +3 Query: 3 GSQSVKCAICQYVTNTNIGNTSAPVPAGRPNG------XXXXXXXXXXXXVIVQNPVSVD 164 G+ SVKCA+CQ+VTN N+ N P+P RPNG V+V+NP+SVD Sbjct: 133 GASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVVVENPMSVD 192 >dbj|BAH57095.1| AT4G20380 [Arabidopsis thaliana] Length = 218 Score = 54.3 bits (129), Expect = 1e-05 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 6/60 (10%) Frame = +3 Query: 3 GSQSVKCAICQYVTNTNIGNTSAPVPAGRPNG------XXXXXXXXXXXXVIVQNPVSVD 164 G+ SVKCA+CQ+VTN N+ N P+P RPNG V+V+NP+SVD Sbjct: 112 GASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVVVENPMSVD 171 >ref|NP_849548.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|30685087|ref|NP_567599.3| zinc finger protein LSD1 [Arabidopsis thaliana] gi|79325187|ref|NP_001031678.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|79325189|ref|NP_001031679.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|145323158|ref|NP_001031680.2| zinc finger protein LSD1 [Arabidopsis thaliana] gi|19423936|gb|AAL87301.1| putative zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|21436207|gb|AAM51391.1| putative zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|21593381|gb|AAM65330.1| zinc-finger protein Lsd1 [Arabidopsis thaliana] gi|332658916|gb|AEE84316.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|332658917|gb|AEE84317.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|332658918|gb|AEE84318.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|332658919|gb|AEE84319.1| zinc finger protein LSD1 [Arabidopsis thaliana] gi|332658920|gb|AEE84320.1| zinc finger protein LSD1 [Arabidopsis thaliana] Length = 184 Score = 54.3 bits (129), Expect = 1e-05 Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 6/60 (10%) Frame = +3 Query: 3 GSQSVKCAICQYVTNTNIGNTSAPVPAGRPNG------XXXXXXXXXXXXVIVQNPVSVD 164 G+ SVKCA+CQ+VTN N+ N P+P RPNG V+V+NP+SVD Sbjct: 107 GASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACPPSTSTSTPPSQTQTVVVENPMSVD 166