BLASTX nr result

ID: Bupleurum21_contig00033429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033429
         (693 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319538.1| predicted protein [Populus trichocarpa] gi|2...   356   2e-96
emb|CBI36792.3| unnamed protein product [Vitis vinifera]              349   3e-94
ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...   349   3e-94
emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]   349   3e-94
ref|XP_002512380.1| pentatricopeptide repeat-containing protein,...   338   5e-91

>ref|XP_002319538.1| predicted protein [Populus trichocarpa] gi|222857914|gb|EEE95461.1|
            predicted protein [Populus trichocarpa]
          Length = 577

 Score =  356 bits (914), Expect = 2e-96
 Identities = 172/229 (75%), Positives = 199/229 (86%)
 Frame = -2

Query: 692  WNSMIAAFARHGNGLKALQVYEEMRSEGVEPTDVTFLSLLHACSHIGLVEKGMEFLDSME 513
            WNSMIAAFARHG+G +ALQ+Y+EMR +GVEPTDVTFLSLLHACSH+GLVEKGMEFL SM 
Sbjct: 330  WNSMIAAFARHGDGSRALQLYKEMRLKGVEPTDVTFLSLLHACSHVGLVEKGMEFLKSMT 389

Query: 512  NLYGFSPRMEHYACVVDMLGRAGRLNEAKTFIEGLPVKPGVLVWQALLGACSITGDPELG 333
             ++  +PRMEHYACVVDMLGRAG LNEAKTFIEGLP+KP VLVWQALLGAC I GDPE+G
Sbjct: 390  EVHKLTPRMEHYACVVDMLGRAGLLNEAKTFIEGLPIKPDVLVWQALLGACGIHGDPEMG 449

Query: 332  KYAADQLSLAAPDSPASYILLANIYSTSGRWKERAKTIRKMKETGVAKETGISWIEIDKK 153
            KYAA+ L L+AP+ P+ YILLANIYS+ GRWKERAKTI++MKE  VAKETGISWIEI+  
Sbjct: 450  KYAAEHLILSAPEKPSPYILLANIYSSKGRWKERAKTIKRMKEMCVAKETGISWIEIENN 509

Query: 152  IHSFVVYDQMHSQSETLYNVLLELFRHMKDEGYVPDRRYILH*HENENE 6
            +HSFVV D+MH Q+E +Y VL ELF HM DEGYVPD+RYIL  + N++E
Sbjct: 510  LHSFVVEDKMHPQAEIIYGVLAELFGHMIDEGYVPDKRYILS-YVNQDE 557


>emb|CBI36792.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  349 bits (895), Expect = 3e-94
 Identities = 168/222 (75%), Positives = 193/222 (86%)
 Frame = -2

Query: 692 WNSMIAAFARHGNGLKALQVYEEMRSEGVEPTDVTFLSLLHACSHIGLVEKGMEFLDSME 513
           WNSMIAAFARHGNG +ALQ+YEEMR EGV PTDVTFLSLLHAC+H+GLVEKGM FL+SM 
Sbjct: 9   WNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMA 68

Query: 512 NLYGFSPRMEHYACVVDMLGRAGRLNEAKTFIEGLPVKPGVLVWQALLGACSITGDPELG 333
             YG  PRMEHYACVVDM+GRAG LNEAK FIE LP KPG+LVWQALLGACSI G+ E+G
Sbjct: 69  KDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMG 128

Query: 332 KYAADQLSLAAPDSPASYILLANIYSTSGRWKERAKTIRKMKETGVAKETGISWIEIDKK 153
           KYAA+QL L AP+SPA YILLANIYS+ G+WKERA+TI+KMK+ GV KETGISWIEI+K+
Sbjct: 129 KYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQ 188

Query: 152 IHSFVVYDQMHSQSETLYNVLLELFRHMKDEGYVPDRRYILH 27
           IHSFVV D+MH  +E +Y VL ELF+ M DEGYVPD+R+IL+
Sbjct: 189 IHSFVVEDRMHPHAEIIYGVLGELFKLMMDEGYVPDKRFILY 230


>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
            [Vitis vinifera]
          Length = 656

 Score =  349 bits (895), Expect = 3e-94
 Identities = 168/222 (75%), Positives = 193/222 (86%)
 Frame = -2

Query: 692  WNSMIAAFARHGNGLKALQVYEEMRSEGVEPTDVTFLSLLHACSHIGLVEKGMEFLDSME 513
            WNSMIAAFARHGNG +ALQ+YEEMR EGV PTDVTFLSLLHAC+H+GLVEKGM FL+SM 
Sbjct: 427  WNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMA 486

Query: 512  NLYGFSPRMEHYACVVDMLGRAGRLNEAKTFIEGLPVKPGVLVWQALLGACSITGDPELG 333
              YG  PRMEHYACVVDM+GRAG LNEAK FIE LP KPG+LVWQALLGACSI G+ E+G
Sbjct: 487  KDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMG 546

Query: 332  KYAADQLSLAAPDSPASYILLANIYSTSGRWKERAKTIRKMKETGVAKETGISWIEIDKK 153
            KYAA+QL L AP+SPA YILLANIYS+ G+WKERA+TI+KMK+ GV KETGISWIEI+K+
Sbjct: 547  KYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQ 606

Query: 152  IHSFVVYDQMHSQSETLYNVLLELFRHMKDEGYVPDRRYILH 27
            IHSFVV D+MH  +E +Y VL ELF+ M DEGYVPD+R+IL+
Sbjct: 607  IHSFVVEDRMHPHAEIIYGVLGELFKLMMDEGYVPDKRFILY 648


>emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score =  349 bits (895), Expect = 3e-94
 Identities = 168/222 (75%), Positives = 193/222 (86%)
 Frame = -2

Query: 692 WNSMIAAFARHGNGLKALQVYEEMRSEGVEPTDVTFLSLLHACSHIGLVEKGMEFLDSME 513
           WNSMIAAFARHGNG +ALQ+YEEMR EGV PTDVTFLSLLHAC+H+GLVEKGM FL+SM 
Sbjct: 313 WNSMIAAFARHGNGSRALQLYEEMRLEGVWPTDVTFLSLLHACAHVGLVEKGMGFLESMA 372

Query: 512 NLYGFSPRMEHYACVVDMLGRAGRLNEAKTFIEGLPVKPGVLVWQALLGACSITGDPELG 333
             YG  PRMEHYACVVDM+GRAG LNEAK FIE LP KPG+LVWQALLGACSI G+ E+G
Sbjct: 373 KDYGIGPRMEHYACVVDMMGRAGLLNEAKKFIERLPEKPGILVWQALLGACSIHGNSEMG 432

Query: 332 KYAADQLSLAAPDSPASYILLANIYSTSGRWKERAKTIRKMKETGVAKETGISWIEIDKK 153
           KYAA+QL L AP+SPA YILLANIYS+ G+WKERA+TI+KMK+ GV KETGISWIEI+K+
Sbjct: 433 KYAANQLFLQAPESPAPYILLANIYSSEGKWKERARTIKKMKDMGVTKETGISWIEIEKQ 492

Query: 152 IHSFVVYDQMHSQSETLYNVLLELFRHMKDEGYVPDRRYILH 27
           IHSFVV D+MH  +E +Y VL ELF+ M DEGYVPD+R+IL+
Sbjct: 493 IHSFVVEDRMHPHAEIIYGVLGELFKLMMDEGYVPDKRFILY 534


>ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548341|gb|EEF49832.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 736

 Score =  338 bits (868), Expect = 5e-91
 Identities = 161/222 (72%), Positives = 188/222 (84%)
 Frame = -2

Query: 692 WNSMIAAFARHGNGLKALQVYEEMRSEGVEPTDVTFLSLLHACSHIGLVEKGMEFLDSME 513
           WNSMIAAFARHG+G +AL++YEEM  EG  PTD+TFLSLLHACSH+GLV+KGM+FL SM 
Sbjct: 259 WNSMIAAFARHGDGFRALRLYEEMIQEGAVPTDLTFLSLLHACSHVGLVDKGMKFLKSMT 318

Query: 512 NLYGFSPRMEHYACVVDMLGRAGRLNEAKTFIEGLPVKPGVLVWQALLGACSITGDPELG 333
            +YG SPR EHYACVVDMLGRAG LNEAK+ IE L +KP VL+WQALLGACSI GD E+G
Sbjct: 319 KVYGISPRAEHYACVVDMLGRAGLLNEAKSLIERLSIKPDVLIWQALLGACSIRGDTEIG 378

Query: 332 KYAADQLSLAAPDSPASYILLANIYSTSGRWKERAKTIRKMKETGVAKETGISWIEIDKK 153
           KYAA+QL L  P  PA Y+LLANIYS+ GRW ERA+TI++MKE GVAKETGISWIEI+KK
Sbjct: 379 KYAAEQLLLLEPKKPAPYVLLANIYSSKGRWDERARTIKRMKEMGVAKETGISWIEIEKK 438

Query: 152 IHSFVVYDQMHSQSETLYNVLLELFRHMKDEGYVPDRRYILH 27
           +HSFVV D+ H Q+E +Y VL ELFR M DEGYVPD+R+IL+
Sbjct: 439 VHSFVVEDKKHPQAEIIYGVLAELFRLMIDEGYVPDKRFILY 480


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