BLASTX nr result

ID: Bupleurum21_contig00033420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033420
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002863353.1| vesicle-associated membrane family protein [...   243   2e-62
ref|NP_199529.1| VAMP (vesicle-associated membrane protein) fami...   243   2e-62
ref|XP_002531789.1| vesicle-associated membrane protein, putativ...   240   1e-61
ref|XP_002264498.2| PREDICTED: LOW QUALITY PROTEIN: vesicle-asso...   238   7e-61
ref|XP_004147233.1| PREDICTED: vesicle-associated protein 2-1-li...   236   3e-60

>ref|XP_002863353.1| vesicle-associated membrane family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309188|gb|EFH39612.1|
           vesicle-associated membrane family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 220

 Score =  243 bits (620), Expect = 2e-62
 Identities = 116/180 (64%), Positives = 142/180 (78%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 NQFVTIHPDELKFQFELEKQICCDLKVGNSTDQHVAFKVKTTSPKKYFVRPNTGVIQPWD 363
           NQ ++I PDELKF FELEKQ  CDLKV N T+ +VAFKVKTTSPKKYFVRPNTGVIQPWD
Sbjct: 7   NQLISIQPDELKFLFELEKQSYCDLKVANKTEHYVAFKVKTTSPKKYFVRPNTGVIQPWD 66

Query: 362 SCVITVTLQPQQESPPDMHCKDKFLLQSTQVPPQTDIDELPQNTFNKESGKLIEECKLRV 183
           SC+I VTLQ Q+E PPDM CKDKFLLQST VPP TD+DELPQ+TF K+SGK + ECKL+V
Sbjct: 67  SCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKV 126

Query: 182 VYTNAEDGLKQSDASNVQGSAANDDN-QFLQRLRDERDAAVRQTQQLQRDLETLKKRRNR 6
            Y +     + S++    G   + +    +QRL++ERDAAV+QTQQLQ +LET+++RRN+
Sbjct: 127 SYISPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETVRRRRNQ 186


>ref|NP_199529.1| VAMP (vesicle-associated membrane protein) family protein
           [Arabidopsis thaliana] gi|30695123|ref|NP_851144.1| VAMP
           (vesicle-associated membrane protein) family protein
           [Arabidopsis thaliana]
           gi|75180692|sp|Q9LVU1.1|VAP21_ARATH RecName:
           Full=Vesicle-associated protein 2-1; AltName: Full=Plant
           VAP homolog 21; Short=AtPVA21; AltName:
           Full=VAMP-associated protein 2-1
           gi|8809600|dbj|BAA97151.1| VAMP (vesicle-associated
           membrane protein)-associated protein-like [Arabidopsis
           thaliana] gi|14334974|gb|AAK59664.1| putative VAMP
           (vesicle-associated membrane protein)-associated protein
           [Arabidopsis thaliana] gi|17104633|gb|AAL34205.1|
           putative VAMP-associated protein [Arabidopsis thaliana]
           gi|21553413|gb|AAM62506.1| VAMP (vesicle-associated
           membrane protein)-associated protein-like [Arabidopsis
           thaliana] gi|332008097|gb|AED95480.1| VAMP
           (vesicle-associated membrane protein) family protein
           [Arabidopsis thaliana] gi|332008098|gb|AED95481.1| VAMP
           (vesicle-associated membrane protein) family protein
           [Arabidopsis thaliana]
          Length = 220

 Score =  243 bits (619), Expect = 2e-62
 Identities = 116/180 (64%), Positives = 141/180 (78%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 NQFVTIHPDELKFQFELEKQICCDLKVGNSTDQHVAFKVKTTSPKKYFVRPNTGVIQPWD 363
           NQ ++I PDELKF FELEKQ  CDLKV N T+ +VAFKVKTTSPKKYFVRPNTGVIQPWD
Sbjct: 7   NQLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWD 66

Query: 362 SCVITVTLQPQQESPPDMHCKDKFLLQSTQVPPQTDIDELPQNTFNKESGKLIEECKLRV 183
           SC+I VTLQ Q+E PPDM CKDKFLLQST VPP TD+DELPQ+TF K+SGK + ECKL+V
Sbjct: 67  SCIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKV 126

Query: 182 VYTNAEDGLKQSDASNVQGSAANDDN-QFLQRLRDERDAAVRQTQQLQRDLETLKKRRNR 6
            Y       + S++    G   + +    +QRL++ERDAAV+QTQQLQ +LET+++RRN+
Sbjct: 127 SYITPSTTQRSSESGATNGDGQSSETISTIQRLKEERDAAVKQTQQLQHELETVRRRRNQ 186


>ref|XP_002531789.1| vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223528582|gb|EEF30603.1| vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 220

 Score =  240 bits (612), Expect = 1e-61
 Identities = 118/180 (65%), Positives = 142/180 (78%), Gaps = 1/180 (0%)
 Frame = -1

Query: 542 NQFVTIHPDELKFQFELEKQICCDLKVGNSTDQHVAFKVKTTSPKKYFVRPNTGVIQPWD 363
           NQ +++HPDELKF FELEKQ  CDLKV N+T+ HVAFKVKTTSPKKYFVRPNTGVIQPWD
Sbjct: 7   NQLISVHPDELKFIFELEKQSFCDLKVVNNTEHHVAFKVKTTSPKKYFVRPNTGVIQPWD 66

Query: 362 SCVITVTLQPQQESPPDMHCKDKFLLQSTQVPPQTDIDELPQNTFNKE-SGKLIEECKLR 186
           SC+I VTLQ QQE+PPDM CKDKFLLQST VP  TD+DELP +TF K+ +GK +EECKLR
Sbjct: 67  SCIIRVTLQAQQEAPPDMQCKDKFLLQSTIVPAHTDVDELPPDTFTKDGTGKTVEECKLR 126

Query: 185 VVYTNAEDGLKQSDASNVQGSAANDDNQFLQRLRDERDAAVRQTQQLQRDLETLKKRRNR 6
           V+Y  A      S+   ++ S  N +   LQ L+DERDAA++QTQQLQ +L+ +K+RR R
Sbjct: 127 VLYV-APSAQGNSEDEALRSSLTNPEAYGLQHLKDERDAAIKQTQQLQHELDMMKRRRYR 185


>ref|XP_002264498.2| PREDICTED: LOW QUALITY PROTEIN: vesicle-associated protein 2-1
           [Vitis vinifera]
          Length = 217

 Score =  238 bits (606), Expect = 7e-61
 Identities = 117/179 (65%), Positives = 137/179 (76%)
 Frame = -1

Query: 548 ITNQFVTIHPDELKFQFELEKQICCDLKVGNSTDQHVAFKVKTTSPKKYFVRPNTGVIQP 369
           IT   +T+HPDELKFQFEL+KQ  CDLKV N+T+ HVAFKVKTTSPKKYFVRPNTGVIQP
Sbjct: 3   ITKPLITVHPDELKFQFELDKQSYCDLKVVNNTEHHVAFKVKTTSPKKYFVRPNTGVIQP 62

Query: 368 WDSCVITVTLQPQQESPPDMHCKDKFLLQSTQVPPQTDIDELPQNTFNKESGKLIEECKL 189
           WD+CVI           PDM CKDKFLLQST VPP TD+DELPQ+ FNK+SGK+IEECKL
Sbjct: 63  WDACVIXXXXXXXXXXXPDMQCKDKFLLQSTIVPPHTDLDELPQDAFNKDSGKVIEECKL 122

Query: 188 RVVYTNAEDGLKQSDASNVQGSAANDDNQFLQRLRDERDAAVRQTQQLQRDLETLKKRR 12
           RVVYT A         ++   +A  + N  LQ L++ERD+AVRQTQQLQ++LE LK+RR
Sbjct: 123 RVVYTLANRNSGDGSFASSNENADYNSNPTLQSLKEERDSAVRQTQQLQQELELLKRRR 181


>ref|XP_004147233.1| PREDICTED: vesicle-associated protein 2-1-like isoform 1 [Cucumis
           sativus] gi|449523726|ref|XP_004168874.1| PREDICTED:
           vesicle-associated protein 2-1-like isoform 1 [Cucumis
           sativus]
          Length = 220

 Score =  236 bits (601), Expect = 3e-60
 Identities = 109/179 (60%), Positives = 138/179 (77%)
 Frame = -1

Query: 542 NQFVTIHPDELKFQFELEKQICCDLKVGNSTDQHVAFKVKTTSPKKYFVRPNTGVIQPWD 363
           N+ +++ PDELKFQ EL+KQ  CDLKV N+T+ HVAFKVKTTSPKKYFVRPNTGV+QPWD
Sbjct: 7   NRLISVQPDELKFQIELDKQSFCDLKVANNTEHHVAFKVKTTSPKKYFVRPNTGVVQPWD 66

Query: 362 SCVITVTLQPQQESPPDMHCKDKFLLQSTQVPPQTDIDELPQNTFNKESGKLIEECKLRV 183
           SC+I VTLQ  +E P DM CKDKFLLQST VPP TD+DELP + FNK+SGK IEECKL+V
Sbjct: 67  SCIIRVTLQAMREYPADMQCKDKFLLQSTIVPPNTDVDELPSDAFNKDSGKTIEECKLKV 126

Query: 182 VYTNAEDGLKQSDASNVQGSAANDDNQFLQRLRDERDAAVRQTQQLQRDLETLKKRRNR 6
           +Y +    L  S+       +++   + L RLR+ERD A+RQT QLQ++L+ +K+R+ R
Sbjct: 127 IYISPTSALGNSEDEKNSSQSSSVSAEILHRLREERDMAIRQTHQLQQELDMMKRRKFR 185


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