BLASTX nr result

ID: Bupleurum21_contig00033413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033413
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1...   164   7e-39
emb|CBI23031.3| unnamed protein product [Vitis vinifera]              164   7e-39
ref|NP_001048742.1| Os03g0114200 [Oryza sativa Japonica Group] g...   159   3e-37
ref|XP_003558986.1| PREDICTED: probable RNA-binding protein EIF1...   158   5e-37
dbj|BAK04858.1| predicted protein [Hordeum vulgare subsp. vulgare]    155   4e-36

>ref|XP_002276446.2| PREDICTED: probable RNA-binding protein EIF1AD-like [Vitis
           vinifera]
          Length = 192

 Score =  164 bits (415), Expect = 7e-39
 Identities = 85/113 (75%), Positives = 97/113 (85%), Gaps = 1/113 (0%)
 Frame = +1

Query: 16  MKGGRKNLKRASED-TFTLLPGQAIMQVVSLRGSNLIEVRDAKGDNLLALFPAKFQKSMW 192
           MKGGRKNLKRA+E+ T TL  GQ+IMQVVSLRG+NLIEV DA+G+N LALFPAKFQKSMW
Sbjct: 1   MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEVMDARGENSLALFPAKFQKSMW 60

Query: 193 IKIGNFVVVDASARMEAVEAGRKVGCIVSQVLYHTQVRALQKSPEWPAIFKST 351
           IK G+FVVVD S R +A+E+G KV CIVSQVL++ QVR LQKS EWP IFKST
Sbjct: 61  IKKGSFVVVDESGREKAMESGSKVACIVSQVLFYEQVRVLQKSIEWPEIFKST 113


>emb|CBI23031.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  164 bits (415), Expect = 7e-39
 Identities = 85/113 (75%), Positives = 97/113 (85%), Gaps = 1/113 (0%)
 Frame = +1

Query: 16  MKGGRKNLKRASED-TFTLLPGQAIMQVVSLRGSNLIEVRDAKGDNLLALFPAKFQKSMW 192
           MKGGRKNLKRA+E+ T TL  GQ+IMQVVSLRG+NLIEV DA+G+N LALFPAKFQKSMW
Sbjct: 1   MKGGRKNLKRAAEEQTLTLQEGQSIMQVVSLRGTNLIEVMDARGENSLALFPAKFQKSMW 60

Query: 193 IKIGNFVVVDASARMEAVEAGRKVGCIVSQVLYHTQVRALQKSPEWPAIFKST 351
           IK G+FVVVD S R +A+E+G KV CIVSQVL++ QVR LQKS EWP IFKST
Sbjct: 61  IKKGSFVVVDESGREKAMESGSKVACIVSQVLFYEQVRVLQKSIEWPEIFKST 113


>ref|NP_001048742.1| Os03g0114200 [Oryza sativa Japonica Group]
           gi|27476090|gb|AAO17021.1| Hypothetical protein [Oryza
           sativa Japonica Group] gi|108705834|gb|ABF93629.1|
           LOC496359 protein, putative, expressed [Oryza sativa
           Japonica Group] gi|113547213|dbj|BAF10656.1|
           Os03g0114200 [Oryza sativa Japonica Group]
           gi|125542126|gb|EAY88265.1| hypothetical protein
           OsI_09718 [Oryza sativa Indica Group]
           gi|215765975|dbj|BAG98203.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222624072|gb|EEE58204.1| hypothetical protein
           OsJ_09157 [Oryza sativa Japonica Group]
          Length = 167

 Score =  159 bits (401), Expect = 3e-37
 Identities = 81/115 (70%), Positives = 96/115 (83%), Gaps = 1/115 (0%)
 Frame = +1

Query: 16  MKGGRKNLKRA-SEDTFTLLPGQAIMQVVSLRGSNLIEVRDAKGDNLLALFPAKFQKSMW 192
           MK GRKNL+RA SE   TL  G++IMQV++LRGSN+IEV DAKG   LALFPAKFQKS W
Sbjct: 1   MKAGRKNLRRACSEGAVTLGEGESIMQVLALRGSNVIEVMDAKGVKSLALFPAKFQKSFW 60

Query: 193 IKIGNFVVVDASARMEAVEAGRKVGCIVSQVLYHTQVRALQKSPEWPAIFKSTSQ 357
           IK GNFVVVDAS R +A+E+G K+ C+VSQVL+H QVRA++KS EWPAIFKSTS+
Sbjct: 61  IKNGNFVVVDASGRDQALESGSKIACVVSQVLFHDQVRAMEKSEEWPAIFKSTSK 115


>ref|XP_003558986.1| PREDICTED: probable RNA-binding protein EIF1AD-like [Brachypodium
           distachyon]
          Length = 164

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/115 (70%), Positives = 95/115 (82%), Gaps = 2/115 (1%)
 Frame = +1

Query: 16  MKGGRKNLKRASED--TFTLLPGQAIMQVVSLRGSNLIEVRDAKGDNLLALFPAKFQKSM 189
           MK GRKNL+RA ++    TL  G++IMQVV+LRGSNLIEV D+KG   LALFPAKFQKS 
Sbjct: 1   MKAGRKNLRRACQEGAAVTLADGESIMQVVTLRGSNLIEVLDSKGVKSLALFPAKFQKSF 60

Query: 190 WIKIGNFVVVDASARMEAVEAGRKVGCIVSQVLYHTQVRALQKSPEWPAIFKSTS 354
           WIK GNFVVVDAS R EA+E+G K+ C+VS+VL+H QVRAL+KS EWPAIFKSTS
Sbjct: 61  WIKNGNFVVVDASGRDEALESGSKIACVVSRVLFHDQVRALEKSGEWPAIFKSTS 115


>dbj|BAK04858.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 168

 Score =  155 bits (391), Expect = 4e-36
 Identities = 79/114 (69%), Positives = 93/114 (81%), Gaps = 2/114 (1%)
 Frame = +1

Query: 16  MKGGRKNLKRASED--TFTLLPGQAIMQVVSLRGSNLIEVRDAKGDNLLALFPAKFQKSM 189
           MK GRKNL+RA ++    TL  G++IMQVV+LRGSNLIEV D +G   LALFPAKFQKS 
Sbjct: 1   MKAGRKNLRRACQEGTAVTLAEGESIMQVVTLRGSNLIEVTDGEGVKSLALFPAKFQKSF 60

Query: 190 WIKIGNFVVVDASARMEAVEAGRKVGCIVSQVLYHTQVRALQKSPEWPAIFKST 351
           WIK GNFVVVDAS R EA+E+G K+ C+VS+VL+H QVRAL+KS EWPAIFKST
Sbjct: 61  WIKNGNFVVVDASGRDEALESGSKIACVVSRVLFHDQVRALEKSGEWPAIFKST 114


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