BLASTX nr result

ID: Bupleurum21_contig00033394 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033394
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320886.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
ref|XP_002515676.1| ATP binding protein, putative [Ricinus commu...   113   2e-23
gb|AFP55581.1| ATP binding protein [Rosa rugosa]                      109   3e-22
ref|XP_002301424.1| predicted protein [Populus trichocarpa] gi|2...   109   3e-22
ref|XP_002533329.1| ATP binding protein, putative [Ricinus commu...   103   1e-20

>ref|XP_002320886.1| predicted protein [Populus trichocarpa] gi|222861659|gb|EEE99201.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/102 (57%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = +2

Query: 77  YVAKKWWRLVEDSCHVYQFYKVPKFNQHMQQNQLYTKVVTYLNSLSCVEDSNYANLFSDN 256
           Y+ KKWWR +ED  HVYQF+KVP+FN+ MQ+NQLY KV  YL+SL+ +EDS+Y NLF+  
Sbjct: 32  YITKKWWRSIEDCFHVYQFFKVPEFNESMQENQLYHKVSIYLSSLASMEDSDYTNLFA-G 90

Query: 257 KKSNDINILLDSDHIVTDTFLSARVYWTN-HKSTSTGVTTLV 379
           KKSNDI + LD + ++ D FL ARV W N  KS +T   TLV
Sbjct: 91  KKSNDIILHLDPNQVIDDYFLGARVSWINDDKSDTTCCRTLV 132


>ref|XP_002515676.1| ATP binding protein, putative [Ricinus communis]
           gi|223545219|gb|EEF46728.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 487

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/119 (47%), Positives = 76/119 (63%), Gaps = 1/119 (0%)
 Frame = +2

Query: 26  IVSIYFXXXXXXXXXXXYVAKKWWRLVEDSCHVYQFYKVPKFNQHMQQNQLYTKVVTYLN 205
           ++ ++F            +   +WR  ED  HVYQFYKVP+FN+H Q NQL+ KV TYL+
Sbjct: 13  VIPVFFLLRFLFRTSFLQILVGYWRSFEDHFHVYQFYKVPQFNEHFQGNQLFRKVFTYLS 72

Query: 206 SLSCVEDSNYANLFSDNKKSNDINILLDSDHIVTDTFLSARVYWTNHKS-TSTGVTTLV 379
           SL  +EDS++ NLFS   KSNDI + LD   ++ D FLSARV+W+N KS  + G  TLV
Sbjct: 73  SLPAMEDSDFTNLFS-GPKSNDIILHLDEKQVIQDKFLSARVWWSNEKSENNNGQRTLV 130


>gb|AFP55581.1| ATP binding protein [Rosa rugosa]
          Length = 490

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/100 (56%), Positives = 69/100 (69%)
 Frame = +2

Query: 80  VAKKWWRLVEDSCHVYQFYKVPKFNQHMQQNQLYTKVVTYLNSLSCVEDSNYANLFSDNK 259
           V K W  L+ D  HVYQFYKVP+FN + Q+NQLY K+  YLNSL  +EDS++ NLFS   
Sbjct: 33  VVKSWQSLI-DKFHVYQFYKVPQFNHNYQENQLYRKISVYLNSLPNIEDSDFTNLFS-GS 90

Query: 260 KSNDINILLDSDHIVTDTFLSARVYWTNHKSTSTGVTTLV 379
           KSNDI    D++H V DTFLSA+V WTN KS   G+ + V
Sbjct: 91  KSNDIFFQHDNNHSVHDTFLSAKVSWTNEKSDVDGIRSYV 130


>ref|XP_002301424.1| predicted protein [Populus trichocarpa] gi|222843150|gb|EEE80697.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/95 (50%), Positives = 69/95 (72%)
 Frame = +2

Query: 77  YVAKKWWRLVEDSCHVYQFYKVPKFNQHMQQNQLYTKVVTYLNSLSCVEDSNYANLFSDN 256
           Y+ KKWWR +ED  HVYQF+KVP+FN++MQ+N LY +V  YL+S++ +EDS++ NLF+  
Sbjct: 32  YITKKWWRSIEDCFHVYQFFKVPEFNENMQKNHLYCEVSIYLSSIASIEDSDFINLFT-G 90

Query: 257 KKSNDINILLDSDHIVTDTFLSARVYWTNHKSTST 361
           KK +DI + LD + ++ D FL ARV W N +   T
Sbjct: 91  KKPHDIVLHLDPNQVIDDYFLGARVSWINEEKNDT 125


>ref|XP_002533329.1| ATP binding protein, putative [Ricinus communis]
           gi|223526834|gb|EEF29050.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 480

 Score =  103 bits (257), Expect = 1e-20
 Identities = 51/101 (50%), Positives = 70/101 (69%)
 Frame = +2

Query: 77  YVAKKWWRLVEDSCHVYQFYKVPKFNQHMQQNQLYTKVVTYLNSLSCVEDSNYANLFSDN 256
           ++ KK WR+ E+  HVYQF+KVP+FN+ MQ NQL+ KV  YLNSLS +EDS++ NLF+  
Sbjct: 32  FLTKKLWRICEEWFHVYQFFKVPEFNESMQDNQLHRKVSVYLNSLSSIEDSDFTNLFT-G 90

Query: 257 KKSNDINILLDSDHIVTDTFLSARVYWTNHKSTSTGVTTLV 379
           KKSN+I + LD + ++ D FL  R+ W N +  S    TLV
Sbjct: 91  KKSNEIILRLDPNQVIDDYFLGTRISWIN-EVNSGATRTLV 130


Top