BLASTX nr result

ID: Bupleurum21_contig00033391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033391
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP45157.2| hypothetical protein SBB1_21t00001 [Solanum bulbo...    99   3e-19
gb|AAP45172.2| hypothetical protein SBB1_14t00021 [Solanum bulbo...    99   3e-19
ref|XP_002326580.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-13
emb|CBI26466.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259...    79   3e-13

>gb|AAP45157.2| hypothetical protein SBB1_21t00001 [Solanum bulbocastanum]
          Length = 445

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/80 (62%), Positives = 58/80 (72%), Gaps = 12/80 (15%)
 Frame = +3

Query: 93  MSGSSVSVAATGDG------------FRPLFTAVQWQELEQQALIYKYLMAGLPVPPELV 236
           MSG+S SV   G G            +RP FTAVQWQELE QA+IYKYL+AGLPVPP+LV
Sbjct: 1   MSGNSTSVVGAGGGGGGEGGMGYGYGYRPPFTAVQWQELEHQAMIYKYLVAGLPVPPDLV 60

Query: 237 ITIRRSLEALSARFFHHSNL 296
           + IRRS EA+SARFFHH +L
Sbjct: 61  VPIRRSFEAISARFFHHPSL 80


>gb|AAP45172.2| hypothetical protein SBB1_14t00021 [Solanum bulbocastanum]
          Length = 552

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/80 (62%), Positives = 58/80 (72%), Gaps = 12/80 (15%)
 Frame = +3

Query: 93  MSGSSVSVAATGDG------------FRPLFTAVQWQELEQQALIYKYLMAGLPVPPELV 236
           MSG+S SV   G G            +RP FTAVQWQELE QA+IYKYL+AGLPVPP+LV
Sbjct: 1   MSGNSTSVVGAGGGGGGEGGMGYGYGYRPPFTAVQWQELEHQAMIYKYLVAGLPVPPDLV 60

Query: 237 ITIRRSLEALSARFFHHSNL 296
           + IRRS EA+SARFFHH +L
Sbjct: 61  VPIRRSFEAISARFFHHPSL 80


>ref|XP_002326580.1| predicted protein [Populus trichocarpa] gi|222833902|gb|EEE72379.1|
           predicted protein [Populus trichocarpa]
          Length = 214

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/68 (60%), Positives = 48/68 (70%)
 Frame = +3

Query: 93  MSGSSVSVAATGDGFRPLFTAVQWQELEQQALIYKYLMAGLPVPPELVITIRRSLEALSA 272
           MS SSV+VAA G   +P FT  QW ELE QALI+KYL AGL VPP L++ IR+S + LS 
Sbjct: 1   MSNSSVTVAAVGPRSQPGFTVAQWHELEHQALIFKYLKAGLSVPPYLLLPIRKSFQLLSP 60

Query: 273 RFFHHSNL 296
            F H SNL
Sbjct: 61  GFLHPSNL 68


>emb|CBI26466.3| unnamed protein product [Vitis vinifera]
          Length = 373

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/75 (53%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
 Frame = +3

Query: 81  LKVEMSGSSVSVAATGDGFRPL---FTAVQWQELEQQALIYKYLMAGLPVPPELVITIRR 251
           L+   +G SV  A+   G       FT  QWQELE QALI+KYLMAGLPVPP+LV+ I++
Sbjct: 42  LQRTQNGGSVGGASMATGMMVRSSPFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQK 101

Query: 252 SLEALSARFFHHSNL 296
           S E++S+RFFHH  +
Sbjct: 102 SFESMSSRFFHHPTM 116


>ref|XP_002270427.2| PREDICTED: uncharacterized protein LOC100259737 [Vitis vinifera]
          Length = 330

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/69 (56%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
 Frame = +3

Query: 99  GSSVSVAATGDGFRPL---FTAVQWQELEQQALIYKYLMAGLPVPPELVITIRRSLEALS 269
           G SV  A+   G       FT  QWQELE QALI+KYLMAGLPVPP+LV+ I++S E++S
Sbjct: 5   GGSVGGASMATGMMVRSSPFTVSQWQELEHQALIFKYLMAGLPVPPDLVLPIQKSFESMS 64

Query: 270 ARFFHHSNL 296
           +RFFHH  +
Sbjct: 65  SRFFHHPTM 73


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