BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033374
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...   184   8e-45
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...   176   1e-42
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containi...   168   4e-40
ref|XP_003615448.1| Pentatricopeptide repeat-containing protein ...   157   6e-37

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score =  184 bits (466), Expect = 8e-45
 Identities = 87/134 (64%), Positives = 111/134 (82%)
 Frame = -3

Query: 403 PNFQIISALVDAYGRAGLFNKVTELMHQVSYKNPELLCETYALAISCFGKTGQLNLMEST 224
           PN QI+S L+DAYG+ G F +VT ++HQVS ++   + E Y+LAISCFGK GQL +ME+ 
Sbjct: 123 PNIQIVSKLIDAYGKMGHFGEVTRILHQVSSRDFNFMHEVYSLAISCFGKGGQLEMMENA 182

Query: 223 LKEMVSKGFKVDSKTGNAFVVYYSIYGSLTEMEDAYGRLRRSRILIEKEAIRAISYAYVK 44
           LKEMVS+GF VDS TGNAF+ YYSI+GSLTEME AY RL++SRILIE+E IRA+S+AY+K
Sbjct: 183 LKEMVSRGFPVDSATGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIK 242

Query: 43  ENKFYELGEFVRDV 2
           E K+Y LG+F+RDV
Sbjct: 243 EKKYYRLGQFLRDV 256


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/137 (62%), Positives = 107/137 (78%)
 Frame = -3

Query: 412 SCVPNFQIISALVDAYGRAGLFNKVTELMHQVSYKNPELLCETYALAISCFGKTGQLNLM 233
           S  P+ QI+S L+DAY + G FN+V  ++ Q+SY N  LL E Y+LAISCFGK GQL LM
Sbjct: 124 SFTPSIQIVSRLIDAYSKKGHFNEVMNILDQLSYSNFSLLHEAYSLAISCFGKGGQLQLM 183

Query: 232 ESTLKEMVSKGFKVDSKTGNAFVVYYSIYGSLTEMEDAYGRLRRSRILIEKEAIRAISYA 53
           E+ LK+MV +GF VD  TGNAF+ YYSI+GSLT+ME AY RL+RSR L+++E IRA+S A
Sbjct: 184 ENALKDMVLRGFPVDYATGNAFIRYYSIHGSLTDMESAYSRLKRSRHLVDREGIRAVSLA 243

Query: 52  YVKENKFYELGEFVRDV 2
           YVKE KFY LGEF+RDV
Sbjct: 244 YVKERKFYRLGEFLRDV 260


>ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|222873650|gb|EEF10781.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  173 bits (439), Expect = 1e-41
 Identities = 87/138 (63%), Positives = 112/138 (81%), Gaps = 1/138 (0%)
 Frame = -3

Query: 412 SCVPNFQIISALVDAYGRAGLFNKVTELMHQVS-YKNPELLCETYALAISCFGKTGQLNL 236
           S VP+ Q+IS L+D Y ++GLF++V +++ Q+S  +  + L + Y+LAISCFGK GQL L
Sbjct: 124 SFVPSVQVISDLIDIYAKSGLFDEVIKILDQLSSLRTFDFLPQVYSLAISCFGKGGQLEL 183

Query: 235 MESTLKEMVSKGFKVDSKTGNAFVVYYSIYGSLTEMEDAYGRLRRSRILIEKEAIRAISY 56
           ME TLK+MVSKGF VDS TGNAFVVYYS++GSL EME AY RL+RSR+LIE+E IRA+S+
Sbjct: 184 MEDTLKKMVSKGFWVDSATGNAFVVYYSLHGSLAEMEAAYDRLKRSRLLIEREGIRAMSF 243

Query: 55  AYVKENKFYELGEFVRDV 2
           AY+KE KFY L EF+RDV
Sbjct: 244 AYIKERKFYGLSEFLRDV 261


>ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
           gi|449507537|ref|XP_004163059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
          Length = 388

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/134 (59%), Positives = 107/134 (79%)
 Frame = -3

Query: 403 PNFQIISALVDAYGRAGLFNKVTELMHQVSYKNPELLCETYALAISCFGKTGQLNLMEST 224
           P+ Q+IS L +AYG+ G F+ +T+++ QV  +   LL E Y+LAISCFGK  QL LMEST
Sbjct: 88  PSVQVISKLFNAYGKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMEST 147

Query: 223 LKEMVSKGFKVDSKTGNAFVVYYSIYGSLTEMEDAYGRLRRSRILIEKEAIRAISYAYVK 44
           L+EMVS GF V+S TGN+F++YYS++GSL EME AYGRL+RSR LIEK+ I A+++AY++
Sbjct: 148 LREMVSSGFTVNSATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIR 207

Query: 43  ENKFYELGEFVRDV 2
           + KFY LGEF+RDV
Sbjct: 208 KRKFYRLGEFLRDV 221


>ref|XP_003615448.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355516783|gb|AES98406.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 310

 Score =  157 bits (398), Expect = 6e-37
 Identities = 74/134 (55%), Positives = 100/134 (74%)
 Frame = -3

Query: 403 PNFQIISALVDAYGRAGLFNKVTELMHQVSYKNPELLCETYALAISCFGKTGQLNLMEST 224
           P+   IS L  +Y +   FN++  ++H +S K   LL + Y+LAISCFG  G++ LME T
Sbjct: 27  PSLHFISKLFKSYTKQNKFNEIINILHSLSSKKLTLLPQFYSLAISCFGAAGKVKLMEET 86

Query: 223 LKEMVSKGFKVDSKTGNAFVVYYSIYGSLTEMEDAYGRLRRSRILIEKEAIRAISYAYVK 44
           + EMVSKGF++DSKTGN  ++ YS++GSL EME+AYGR +RSR LIE+  IRA+SY Y+K
Sbjct: 87  IDEMVSKGFQIDSKTGNEILLCYSVFGSLNEMENAYGRFKRSRFLIEENVIRAMSYGYLK 146

Query: 43  ENKFYELGEFVRDV 2
           + KFYELG+FVRDV
Sbjct: 147 KRKFYELGQFVRDV 160