BLASTX nr result

ID: Bupleurum21_contig00033354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033354
         (1020 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637636.1| Cytochrome P450 [Medicago truncatula] gi|355...    72   2e-10
ref|XP_003617371.1| F-box protein interaction domain containing ...    58   3e-06

>ref|XP_003637636.1| Cytochrome P450 [Medicago truncatula] gi|355503571|gb|AES84774.1|
           Cytochrome P450 [Medicago truncatula]
          Length = 413

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 81/314 (25%), Positives = 132/314 (42%), Gaps = 35/314 (11%)
 Frame = -1

Query: 852 LINSYHRFYSTMPPRSVKRKLSNIVSDNEGNNKNSQTIPVQTLMPYRRHDIWFEILSWLS 673
           ++N+ +  Y    P++     +N    N+  N N + I    L+P    D+   + + + 
Sbjct: 9   MLNNCNCIYCYYDPKANSHDHAN--KKNKNQNSNCKAIS-NMLLP---EDLMLYLFTLVP 62

Query: 672 ASCLYNIMSRVCNTWATIIRNPYFVDTH---LSRSRSGLFMHDRLLPFMRPRFLQL---M 511
            SCL N    VC +WAT+I +  FV+ +     RS+ GL++ + L+   R  FL+    +
Sbjct: 63  LSCLLNSARFVCISWATVIHSSRFVEAYEQSCPRSKLGLYV-ENLVKQGRSYFLEFNDDV 121

Query: 510 NGYVE---------CSYVSKPCPGLMHSTYQGVSLFCYSNIGSFCVLNPITMQLAEISRP 358
           NG  E           Y+   C GL         LF  SN G F V+NPI     +I   
Sbjct: 122 NGQFERFDFGIPENLGYIISTCDGL---------LFLSSNCGQFFVVNPILKCCLKIPPT 172

Query: 357 DL---VKCISYSYSAIRDRRSGELKLVCACLQSQSVRTW---YVQRLGIENSWKKIS--- 205
            +   +  +    +  R   + + KL    +   S   W   YV R+GI+NSWK+I+   
Sbjct: 173 PISQQLLVVGSRCTIARVPHTAKFKLFLLDVLEISGNFWYVFYVLRIGIDNSWKEIARKE 232

Query: 204 -------TWK---SGRLDCPGMSIGYFLXXXXXXXXXXXXXXSDETINIIHCPVV-DRPP 58
                  TW+   SG  D       Y++                E   + + P+  DR P
Sbjct: 233 APRDWFFTWQPLYSGGNDL------YWITIDDIIVMDVDREIIVEEYPLPNVPMPGDRVP 286

Query: 57  TYVQMGNELSCISH 16
            ++ MG+ LSCI++
Sbjct: 287 IFLSMGDHLSCIAY 300


>ref|XP_003617371.1| F-box protein interaction domain containing protein [Medicago
           truncatula] gi|355518706|gb|AET00330.1| F-box protein
           interaction domain containing protein [Medicago
           truncatula]
          Length = 423

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 68/235 (28%), Positives = 104/235 (44%), Gaps = 17/235 (7%)
 Frame = -1

Query: 858 FFLINSYHRFYSTMPPRSVKRKLSNIVSDNEGNNKNSQTIPVQTLMPYRRHDIWFEILSW 679
           F  IN    + S +  +S      NI  +   N+K+ + IP + L+P    D+ F+I S 
Sbjct: 19  FKFINKCSCWCSYLDSKSHDHAKKNI--NQNSNSKSCKEIP-KVLLP---EDLLFDIFSL 72

Query: 678 LSASCLYNIMSRVCNTWATIIRNPYFVDTHL--SRSRSGLFMHDRLLPFMRPRFLQL--- 514
           +  +C+ N    VC TW T IR+  F   +    RS+ GL++  R +      FL +   
Sbjct: 73  VPLNCIINSTRYVCKTWGTSIRSSDFAKVYQRNGRSKLGLYVEKR-MEESSSYFLDIKDD 131

Query: 513 MNGYVECSYVSKP-CPGLMHSTYQGVSLF---CYSNIGSFCVLNPI-----TMQLAEISR 361
           M+G  E   +  P   G + ST  G+ L    C  N     V+NPI      + L  IS 
Sbjct: 132 MSGQFERIDLGTPQTMGDLISTCDGILLLSNRCRQNF----VVNPILKCWLRIPLFPISH 187

Query: 360 PDLVKCISYSYSAIRDRRSGELKLVCACLQSQSVRTWYV---QRLGIENSWKKIS 205
             +V      +   R   + + KL    +   S   WYV    R+GI+NSWK+I+
Sbjct: 188 ERIV--FRDQFIIARVPCTDKFKLFSLVIHVVSGAFWYVFYALRIGIDNSWKEIA 240


Top