BLASTX nr result

ID: Bupleurum21_contig00033346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033346
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            102   4e-20
emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]    93   2e-17
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]    92   4e-17
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]    87   2e-15
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]    86   3e-15

>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/145 (37%), Positives = 78/145 (53%), Gaps = 8/145 (5%)
 Frame = -1

Query: 412 ITNVLLVPSFQFNLLSISQLTTQTRSLIFFNGNECFLQDQSRTNTKVLGTLVDGLYQF-- 239
           I++VL +P F++NLLS+S+LT +    + F  + C LQD      K  G++ +GLY +  
Sbjct: 183 ISHVLYIPDFKYNLLSVSELTKELHCCMVFYPDHCILQDLHTVKVKGTGSMENGLYYWSH 242

Query: 238 VNSSVSAFSTYKGTTPS------LWHKRLGHVPHKXXXXXXXXXXXXXXXXXICETCPLA 77
           + S   A+S       S      LWH+RLGH+PHK                  C  CPLA
Sbjct: 243 IVSPTVAYSVSPSVALSTLDDVDLWHRRLGHIPHKVLQQMQIPHISSSSKLTSCPICPLA 302

Query: 76  KQCRLPFPTSFSQSSHPFDLVHCDL 2
           KQ RLPFP S +++ + FDL+H D+
Sbjct: 303 KQTRLPFPQSPTRADNVFDLIHADV 327


>emb|CAN81016.1| hypothetical protein VITISV_025518 [Vitis vinifera]
          Length = 1461

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = -1

Query: 418 ITITNVLLVPSFQFNLLSISQLTTQTRSLIFFNGNECFLQDQSRTNTKVLGTLVDGLYQF 239
           I + +VL VP FQ NLLS+S+LT   + ++ F  + C +QD +   T  LG   +GLY  
Sbjct: 461 IKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFFFDFCVVQDATTRKTIGLGKQHNGLYYL 520

Query: 238 VNSSVSAFSTYKGTTPSLWHKRLGHVPH-KXXXXXXXXXXXXXXXXXICETCPLAKQCRL 62
                 A +        LWH+RLGH                      +C+ CPLAKQ RL
Sbjct: 521 AQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNPKIYFDSKHVCDICPLAKQTRL 580

Query: 61  PFPTSFSQSSHPFDLVHCDL 2
            FP+SF  S  PFDL+HCD+
Sbjct: 581 SFPSSFISSHAPFDLIHCDI 600


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 1/140 (0%)
 Frame = -1

Query: 418 ITITNVLLVPSFQFNLLSISQLTTQTRSLIFFNGNECFLQDQSRTNTKVLGTLVDGLYQF 239
           I + +VL VP FQ NLLS+S+LT   + ++ F  + C +QD +   T  LG   +GLY  
Sbjct: 53  IKLDDVLKVPQFQVNLLSVSKLTRALQCIVMFXSDFCVVQDATTRKTXGLGKQHNGLYYL 112

Query: 238 VNSSVSAFSTYKGTTPSLWHKRLGHVPH-KXXXXXXXXXXXXXXXXXICETCPLAKQCRL 62
                 A +        LWH+RLGH                      +C+  PLAKQ RL
Sbjct: 113 AQDQNPALAYAIHKHSDLWHQRLGHPSSGPLQVLAKVNXEIYFDSKHVCDIXPLAKQTRL 172

Query: 61  PFPTSFSQSSHPFDLVHCDL 2
            FP+SF  S  PFDL+HCD+
Sbjct: 173 SFPSSFISSHAPFDLIHCDI 192


>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
          Length = 1178

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
 Frame = -1

Query: 418 ITITNVLLVPSFQFNLLSISQLTTQTRSLIFFNGNECFLQDQSRTNTKVLGTLV--DGLY 245
           IT+ NVL VP    NLLS+SQLT     ++ FN   C +QD +R   +++GT V  DGLY
Sbjct: 188 ITLQNVLYVPKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDHTR---ELIGTGVRRDGLY 244

Query: 244 QF---VNSSVSAFSTYK-GTTPSLWHKRLGHVPHKXXXXXXXXXXXXXXXXXICETCPLA 77
            F      SV   S +   +T  LWHKR+GH   K                  CE C  A
Sbjct: 245 YFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRA 304

Query: 76  KQCRLPFPTSFSQSSHPFDLVHCDL 2
           K  R  FP S ++++  F+ +HCDL
Sbjct: 305 KHXRDKFPLSDNKATRIFEKIHCDL 329


>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
          Length = 1099

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 55/145 (37%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
 Frame = -1

Query: 418 ITITNVLLVPSFQFNLLSISQLTTQTRSLIFFNGNECFLQDQSRTNTKVLGTLV--DGLY 245
           IT+ NVL VP    NLLS+SQLT     ++ FN   C +QD +R   +++GT V  DGLY
Sbjct: 102 ITLQNVLYVPKLNCNLLSVSQLTDDLHCIVQFNSYMCAIQDHTR---ELIGTGVRRDGLY 158

Query: 244 QF---VNSSVSAFSTYK-GTTPSLWHKRLGHVPHKXXXXXXXXXXXXXXXXXICETCPLA 77
            F      SV   S +   +T  LWHKR+GH   K                  CE C  A
Sbjct: 159 YFGGAEGDSVQHVSVHNAASTLELWHKRMGHPSEKVVKLLPPVSNLKGSLNKACEICFRA 218

Query: 76  KQCRLPFPTSFSQSSHPFDLVHCDL 2
           K  R  FP S ++++  F+ +HCDL
Sbjct: 219 KHPRDKFPLSDNKATRIFEKIHCDL 243


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