BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033342
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA95369.1| retrotransposon protein, putative, Ty3-gypsy subc...    89   4e-16
gb|AAL75988.1|AF466204_3 putative GAG-POL precursor -orf2 protei...    87   1e-15
gb|ABF93908.1| retrotransposon protein, putative, Ty3-gypsy subc...    87   1e-15
gb|AAL67586.1|AC018929_8 putative GAG-POL precursor [Oryza sativ...    87   2e-15
gb|AAL91601.1|AC099400_7 Putative gag-pol precursor [Oryza sativ...    86   2e-15

>gb|ABA95369.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1318

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
 Frame = -2

Query: 345  AVLEMKPPSSQKDI*KLTEGLAALRRFISKLAEKCLLFFEILRGAKNSKYIAWTNECQSA 166
            A+L MKPPSS+KD+ KLTEG+AAL RF+S+L E+ + FF++L+   N     W  + Q A
Sbjct: 909  AILNMKPPSSRKDVQKLTEGMAALSRFVSRLGERGMPFFKLLKKTDN---FQWGPKAQKA 965

Query: 165  FETIKHYLITPPILTKALPEEPXXXXXXXXXXXXXXXLI--RIEKG----IERPVYYVSQ 4
            FE  K  L TPP+L  + P+EP               L+  R E+G    ++RP+Y+VS+
Sbjct: 966  FEDFKKLLTTPPVLASSHPQEPLLLYVLATSQVVSTVLVVEREEEGHVQKVQRPIYFVSE 1025


>gb|AAL75988.1|AF466204_3 putative GAG-POL precursor -orf2 protein [Sorghum bicolor]
          Length = 756

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 50/122 (40%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
 Frame = -2

Query: 348 KAVLEMKPPSSQKDI*KLTEGLAALRRFISKLAEKCLLFFEILRGAKNSKYIAWTNECQS 169
           K VL+M+PP + KDI KLTE +AAL RFIS+L EKCL FF++L   K S+  +WT E  +
Sbjct: 96  KVVLDMRPPKNVKDIQKLTECMAALSRFISRLGEKCLPFFKLL---KASEKFSWTEEADA 152

Query: 168 AFETIKHYLITPPILTKALPEEPXXXXXXXXXXXXXXXLI--RIEKG----IERPVYYVS 7
           AF  +K +L +PP+L    P E                ++  R E G    ++RPVY++S
Sbjct: 153 AFTQLKTFLTSPPVLKAPQPNEDLLLYIAATDRVVSTAIVVERDEPGHVYKVQRPVYFIS 212

Query: 6   QI 1
           ++
Sbjct: 213 EV 214


>gb|ABF93908.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 983

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
 Frame = -2

Query: 345 AVLEMKPPSSQKDI*KLTEGLAALRRFISKLAEKCLLFFEILRGAKNSKYIAWTNECQSA 166
           A+L MKPPSSQKD+ KLT  +AAL RF+S+L E+ + FFE+L+   N     W  E Q A
Sbjct: 239 AILNMKPPSSQKDVQKLTGCMAALSRFVSRLGERGMPFFELLKKTDN---FQWRPEAQKA 295

Query: 165 FETIKHYLITPPILTKALPEEP-XXXXXXXXXXXXXXXLIRIEK-----GIERPVYYVSQ 4
           FE  K  L TPP+L    P+EP                ++ +EK      ++RP+Y+VS+
Sbjct: 296 FENFKKLLTTPPVLASPHPQEPLLLYMSATSQVVSTVLVVELEKEGHIQKVQRPIYFVSE 355

Query: 3   I 1
           +
Sbjct: 356 V 356


>gb|AAL67586.1|AC018929_8 putative GAG-POL precursor [Oryza sativa Japonica Group]
           gi|31433656|gb|AAP55140.1| retrotransposon protein,
           putative, Ty3-gypsy subclass [Oryza sativa Japonica
           Group]
          Length = 1099

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
 Frame = -2

Query: 345 AVLEMKPPSSQKDI*KLTEGLAALRRFISKLAEKCLLFFEILRGAKNSKYIAWTNECQSA 166
           A+L MKPPSSQKD+ KLT  +AAL RF+S+L E+ + FF++L+   N     W  E Q A
Sbjct: 306 AILNMKPPSSQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDN---FQWGPEAQKA 362

Query: 165 FETIKHYLITPPILTKALPEEPXXXXXXXXXXXXXXXLI--RIEKG----IERPVYYVSQ 4
           FE  K  L TPP+L    P+EP               L+  R E+G    ++RP+Y+VS+
Sbjct: 363 FEDFKELLTTPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHIQKVQRPIYFVSE 422

Query: 3   I 1
           +
Sbjct: 423 V 423


>gb|AAL91601.1|AC099400_7 Putative gag-pol precursor [Oryza sativa Japonica Group]
          Length = 1416

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 50/121 (41%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
 Frame = -2

Query: 345  AVLEMKPPSSQKDI*KLTEGLAALRRFISKLAEKCLLFFEILRGAKNSKYIAWTNECQSA 166
            A+L MKPPSSQKD+ KLT  +AAL RF+S+L E+ + FF++L+   N     W  E Q A
Sbjct: 900  AILNMKPPSSQKDVQKLTGCMAALSRFVSRLGERGMPFFKLLKKTDN---FQWGPEAQKA 956

Query: 165  FETIKHYLITPPILTKALPEEPXXXXXXXXXXXXXXXLI--RIEKG----IERPVYYVSQ 4
            FE  K  L TPP+L    P+EP               L+  R E+G    ++RP+Y+VS+
Sbjct: 957  FEDFKKLLTTPPVLASPHPQEPLLLYVSATSQVVSTVLVVEREEEGHIQKVQRPIYFVSE 1016

Query: 3    I 1
            +
Sbjct: 1017 V 1017