BLASTX nr result

ID: Bupleurum21_contig00033335 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033335
         (662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   106   5e-21
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    99   9e-19
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    97   2e-18
ref|XP_002328748.1| predicted protein [Populus trichocarpa] gi|2...    93   5e-17
ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus c...    91   3e-16

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score =  106 bits (264), Expect = 5e-21
 Identities = 75/225 (33%), Positives = 109/225 (48%), Gaps = 9/225 (4%)
 Frame = +2

Query: 5   TPSWRASGEPFTAPEDMHFQGSIYWNGSVFWWSNFVHCSLSRDKPYILYFNIFKEKVEQM 184
           T  WR SG PF AP  + F   +YWNG++ W S          +   LYF++ +E V +M
Sbjct: 183 TGPWRVSGVPFAAPISVDFPSGVYWNGAIHWIS---------PREASLYFDLNEELVREM 233

Query: 185 SMPPLQCIGEVELYGQEDVMTFHIPSYLAESEGHLHFVELHPDVPYLFNVYEMASDYSGW 364
            MPP+      +   +  +  F       ES GHLH VE++      FNVYEM  D+SGW
Sbjct: 234 PMPPVP-----DDSNERGIRCF------GESCGHLHLVEIYESSTTQFNVYEMERDHSGW 282

Query: 365 SVKYKFDIHDISTVFTEIIE--KNIYNVGDTFNILSI-------GTSMVLEIPGDKVVRY 517
            VK++ D++ ++  F  IIE     Y+   +F++L I        + + L IPG KV+ Y
Sbjct: 283 FVKFRVDLNGVALAFPGIIEGYHEEYDYMYSFSVLCIVRREKEEDSFLALHIPG-KVIGY 341

Query: 518 NFVDKRVEELWKFDSKFQKSYNHVYDYDGLRHVCAFPYIESLACV 652
           NF  K  +     D+    ++   Y         AF YIESL+ V
Sbjct: 342 NFSSKSYQ---TSDTDCPLAFGWSY---------AFQYIESLSLV 374


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 98.6 bits (244), Expect = 9e-19
 Identities = 69/225 (30%), Positives = 114/225 (50%), Gaps = 11/225 (4%)
 Frame = +2

Query: 11  SWRASGEPFTAPEDMHFQGSIYWNGSVFWWSNFVHCSLSRDKPYILYFNIFKEKVEQMSM 190
           +WR SG PF AP DM F   ++WNG++ W S   +          +YF++ +E +   SM
Sbjct: 193 AWRLSGLPFVAPFDMVFDNGVFWNGAIHWISATGNA---------IYFDMDRECIS--SM 241

Query: 191 PPLQCIGEVELYGQEDVMTFHIPSYLAESEGHLHFVELHPDVPYLFNVYEMASDYSGWSV 370
           P L    E   +G+          Y  ES+GHLH +E++      FNVYEM  DYS W +
Sbjct: 242 PKLPFSYE---WGKRRFR------YFGESDGHLHLIEIYGLRTTQFNVYEMEKDYSFWRI 292

Query: 371 KYKFDIHDISTVFTEIIEKNIYNVGDT----FNILSI-------GTSMVLEIPGDKVVRY 517
           +Y+  +  +   F E++ ++  + GD+    F +LS+        +S++L IPG KV+ Y
Sbjct: 293 RYRVQLDHVVAAFPEMV-RSYLDAGDSNYYAFVVLSLVEEDATEESSLLLHIPG-KVISY 350

Query: 518 NFVDKRVEELWKFDSKFQKSYNHVYDYDGLRHVCAFPYIESLACV 652
           N  +K  +++ +    +    +   +      + A+ YIE+LACV
Sbjct: 351 NLKNKTFKKVCEL--SYGTGGSRTKESLQFGWLDAYQYIETLACV 393


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 70/229 (30%), Positives = 107/229 (46%), Gaps = 12/229 (5%)
 Frame = +2

Query: 2   GTPSWRASGEPFTAPEDMHFQGSIYWNGSVFWWSNFVHCSLSRDKPYILYFNIFKEKVEQ 181
           GT  WR SG+PF AP DM F   ++WNG+V W S              LYF I + +++ 
Sbjct: 208 GTGDWRLSGKPFRAPFDMVFYDGVFWNGAVHWIS---------PSGASLYFGIDEGRIDT 258

Query: 182 MSMPPLQCIGEVELYGQEDVMTFHIPSYLAESEGHLHFVELHPDVPYLFNVYEMASDYSG 361
           M  PP    G    +G+  +  F       ES GHLH +E++      F VYEM  DYS 
Sbjct: 259 MPPPPPGPGG----WGKRRIRHF------GESGGHLHIIEIYGPRTTQFVVYEMERDYSN 308

Query: 362 WSVKYKFDIHDISTVFTEIIEKNIYNVGD----TFNILSI--------GTSMVLEIPGDK 505
           W V++  D+  +   F EI + N  +  D     +N+L +          S++L+I G K
Sbjct: 309 WGVRFSVDLDKVIAAFPEITQ-NYLDAHDLYYYAYNVLCLIRGGGNEEDFSLLLQIRG-K 366

Query: 506 VVRYNFVDKRVEELWKFDSKFQKSYNHVYDYDGLRHVCAFPYIESLACV 652
           ++ YN  D   + ++        +   V     +  + A+PY+E+L CV
Sbjct: 367 IICYNIKDGSFKNVYDVAHGNPPALPPVKASSLIGCLEAYPYMETLTCV 415


>ref|XP_002328748.1| predicted protein [Populus trichocarpa] gi|222839046|gb|EEE77397.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 72/228 (31%), Positives = 104/228 (45%), Gaps = 15/228 (6%)
 Frame = +2

Query: 14  WRASGEPFTAPEDMHFQGSIYWNGSVFWWSNFVHCSLSRDKPYILYFNIFKEKVEQMSMP 193
           WR SG PFT  + M F+GS++ NG + W        L+      L F++  E+++QM MP
Sbjct: 9   WRVSGGPFTTEDRMLFEGSVFCNGVIHW--------LNISSGSSLCFDVDGEQLKQMPMP 60

Query: 194 PLQCIGEVELYGQEDVMTFHIPSYLAESEGHLHFVELH---PDVPYLFNVYEMASDYSGW 364
           P+  I        +D M      Y  ES G L  VE+H   P      +VYEM +DYSGW
Sbjct: 61  PIPQI--------DDGMEQRNVRYFGESRGRLLLVEIHGPPPQANTQLDVYEMRADYSGW 112

Query: 365 SVKYKFDIHDISTVFTEIIEKNIYNVGD----TFNILSI--------GTSMVLEIPGDKV 508
            VK+  D++ I+  F E+I  +     +     F IL+           S++L IPG KV
Sbjct: 113 FVKHHIDLNAIAGAFPEMIMSSSLEFWELTSYAFEILAFVRGESDEDSFSVLLHIPG-KV 171

Query: 509 VRYNFVDKRVEELWKFDSKFQKSYNHVYDYDGLRHVCAFPYIESLACV 652
           + Y+F +K               +N             + Y+ESLACV
Sbjct: 172 IPYDFKEKNF-----------VMFN------------VYQYVESLACV 196


>ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus communis]
           gi|223550115|gb|EEF51602.1| hypothetical protein
           RCOM_1501190 [Ricinus communis]
          Length = 332

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 11/227 (4%)
 Frame = +2

Query: 5   TPSWRASGEPFTAPE-DMHFQGSIYWNGSVFWWSNFVHCSLSRDKPYILYFNIFKEKVEQ 181
           T  WR +   FT    D  F G ++WNG++ W++         D      F++ +E++ +
Sbjct: 128 TGLWRVTAASFTLDNMDFGFYGGVFWNGAIHWYT---------DSGPSFCFDVDQEQIRE 178

Query: 182 MSMPPLQCIGEVELYGQEDVMTFHIPSYLAESEGHLHFVELHPDVPYLFNVYEMASDYSG 361
           M MPP+      + Y +  +       Y  ES GHL+ +E++      FNV E+A DYSG
Sbjct: 179 MPMPPIPD----DWYRRRVI-------YFGESGGHLNLIEIYHHAATQFNVCELAKDYSG 227

Query: 362 WSVKYKFDIHDISTVFTEIIEKNI------YNVGDTFNIL----SIGTSMVLEIPGDKVV 511
           W VKY+ ++ ++   F E+I+         Y   + + I+       + MVL +P  K++
Sbjct: 228 WFVKYRIELEEVIIAFPEMIKTQFEPTVLNYYAYEIWCIVRGESDENSYMVLHMPA-KII 286

Query: 512 RYNFVDKRVEELWKFDSKFQKSYNHVYDYDGLRHVCAFPYIESLACV 652
           RYN   K  ++L  F      +  H  D    R   A+ YI SLA V
Sbjct: 287 RYNLKGKSFKKLCDFPPDSGATGFH-EDAMNFRWGNAYTYIRSLAPV 332


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