BLASTX nr result

ID: Bupleurum21_contig00033330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033330
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509805.1| conserved hypothetical protein [Ricinus comm...    96   4e-25
emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]    75   3e-23
ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246...    75   1e-22
ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|2...    78   2e-17
ref|XP_002303590.1| predicted protein [Populus trichocarpa] gi|2...    77   5e-12

>ref|XP_002509805.1| conserved hypothetical protein [Ricinus communis]
           gi|223549704|gb|EEF51192.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 736

 Score = 95.5 bits (236), Expect(2) = 4e-25
 Identities = 53/90 (58%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
 Frame = +3

Query: 186 MDLEFEKFCVVDGSPNTVLPCPRQFSRVEKEKTN---ANHHDTLSPKQRFSEINFRRYRS 356
           M+L+FEK C  D SPNTVLPC R+FS VEK +TN       + L+ K+ F EI+F RYRS
Sbjct: 1   MELDFEKKCTSDQSPNTVLPC-RKFSNVEKRRTNNKPPRKDNLLTAKEAFMEISFGRYRS 59

Query: 357 ASCKRTQSRKVVVEGNEILKRGSVYQNSQE 446
           +SCK T SR V +EGN  LKRGS+YQNS+E
Sbjct: 60  SSCKTT-SRHVGLEGNTELKRGSIYQNSRE 88



 Score = 46.2 bits (108), Expect(2) = 4e-25
 Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 2/181 (1%)
 Frame = +2

Query: 425 SLSKFSRTV--MKDLSDFGDRRKIELPQSSANALSFXXXXXXXXXXXXXXXXERNRSSVM 598
           S+ + SR V  MK +    +R+KIEL Q S    SF                 + RSS +
Sbjct: 81  SIYQNSREVRKMKKMGIDEERKKIELSQDSDTTFSFNIVDSLCSSNEEN---SQKRSSAL 137

Query: 599 SLNXXXXXXXXXXXXXTEFGDGSYRPILESEVTLNSFLQISLGFEDRENQSAAYVERRQT 778
            LN                 + + +P  ES ++ + F +I    + RE Q A  V R   
Sbjct: 138 CLNSNLNP------------ESTRKPCTESSLS-DDFFEICPNLDKREKQLAGTVRRDSI 184

Query: 779 EASKCSHDPAFDLRRDDSELRKRDTGFLVQKSLSSKQVIPYPHLQSQSNCSTPSTLTPHF 958
           E      +       D ++L  +D      +S S K  +PY    S+S+CS+ ++    F
Sbjct: 185 ENPTLRSEQVVGPTNDANDLLDKDIALTFHRSHSVKVEMPYSPSPSESDCSSKASSKSRF 244

Query: 959 S 961
           S
Sbjct: 245 S 245


>emb|CAN65660.1| hypothetical protein VITISV_000955 [Vitis vinifera]
          Length = 937

 Score = 75.5 bits (184), Expect(2) = 3e-23
 Identities = 42/99 (42%), Positives = 61/99 (61%), Gaps = 3/99 (3%)
 Frame = +3

Query: 159 ICLSVTGLVMDLEFEKFCVVDGSPNTVLPCPRQFSRVEKEKTN---ANHHDTLSPKQRFS 329
           + L    L M+L+FEK+C +  SP TVLP  +++  + K  T    A   + LS ++ F+
Sbjct: 175 VILPTLKLDMELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLLSIEEDFA 234

Query: 330 EINFRRYRSASCKRTQSRKVVVEGNEILKRGSVYQNSQE 446
           EI+F  + S SCK  + R V VEGN  LKRGS+YQ+S+E
Sbjct: 235 EISFGDFHSFSCKSIRYRPVGVEGNVELKRGSIYQSSEE 273



 Score = 59.7 bits (143), Expect(2) = 3e-23
 Identities = 47/155 (30%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
 Frame = +2

Query: 479 RRKIELPQSSANALSFXXXXXXXXXXXXXXXXERNRSSVMSLNXXXXXXXXXXXXXTEFG 658
           RRKIEL +SS ++  F                E  RS V SLN               F 
Sbjct: 286 RRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLNSDLNASSVRKPCSQVFS 345

Query: 659 -DGSYRPILESEVTLNSFLQISLGFEDRENQSAAYVERRQTEASKCSHDPAFDLRRDDSE 835
              S    L    + + F +I L  ++REN SA   ER     SK   D     + D ++
Sbjct: 346 LPSSPGHFLTRGGSSDGFFEIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSND 405

Query: 836 LRKRDTGFLVQKSLSSKQVIPYPHLQSQSNCSTPS 940
           L +R+T   + KSLS+K  +P+   QS+S+ S  S
Sbjct: 406 LLERETVLTLYKSLSAKVALPHSPSQSESDYSRTS 440


>ref|XP_002270125.1| PREDICTED: uncharacterized protein LOC100246220 [Vitis vinifera]
          Length = 758

 Score = 74.7 bits (182), Expect(2) = 1e-22
 Identities = 41/92 (44%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
 Frame = +3

Query: 180 LVMDLEFEKFCVVDGSPNTVLPCPRQFSRVEKEKTN---ANHHDTLSPKQRFSEINFRRY 350
           L M+L+FEK+C +  SP TVLP  +++  + K  T    A   + LS ++ F+EI+F  +
Sbjct: 3   LDMELDFEKYCSLGLSPRTVLPSNQRYLGIGKRNTKEKPARRSNLLSIEEDFAEISFGDF 62

Query: 351 RSASCKRTQSRKVVVEGNEILKRGSVYQNSQE 446
            S SCK  + R V VEGN  LKRGS+YQ+S+E
Sbjct: 63  HSFSCKSIRYRPVGVEGNVELKRGSIYQSSEE 94



 Score = 58.9 bits (141), Expect(2) = 1e-22
 Identities = 47/155 (30%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
 Frame = +2

Query: 479 RRKIELPQSSANALSFXXXXXXXXXXXXXXXXERNRSSVMSLNXXXXXXXXXXXXXTEFG 658
           RRKIEL +SS ++  F                E  RS V SLN               F 
Sbjct: 107 RRKIELSRSSDSSFPFRIVDSLCSSDEEDPVLEEKRSPVKSLNSDLNASSVRKPCSQVFS 166

Query: 659 -DGSYRPILESEVTLNSFLQISLGFEDRENQSAAYVERRQTEASKCSHDPAFDLRRDDSE 835
              S    L    + + F +I L  ++REN SA   ER     SK   D     + D ++
Sbjct: 167 LPSSPGHFLTRGGSSDGFSEIGLNLDNRENHSAESAERDSIRDSKFKCDDVVGPQNDSND 226

Query: 836 LRKRDTGFLVQKSLSSKQVIPYPHLQSQSNCSTPS 940
           L +R+T   + KSLS+K  +P+   QS+S+ S  S
Sbjct: 227 LLERETVLTLYKSLSAKVALPHSPSQSESDYSRTS 261


>ref|XP_002299532.1| predicted protein [Populus trichocarpa] gi|222846790|gb|EEE84337.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score = 77.8 bits (190), Expect(2) = 2e-17
 Identities = 47/92 (51%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
 Frame = +3

Query: 180 LVMDLEFEKFCVVDGSPNTVLPCPRQFSRVEKEKTNAN---HHDTLSPKQRFSEINFRRY 350
           L M+L+ EK  + D SPNTVLP  R+ S VEK   N       D L  K+ F+EI+FRRY
Sbjct: 3   LEMELDSEKSSISDLSPNTVLP-HRRCSEVEKRSVNGKLTRKDDILRVKESFTEISFRRY 61

Query: 351 RSASCKRTQSRKVVVEGNEILKRGSVYQNSQE 446
           RS+SCK   SR V  EG+   KRGS+YQ+S+E
Sbjct: 62  RSSSCKNVLSRPVGSEGHIEPKRGSMYQSSRE 93



 Score = 38.1 bits (87), Expect(2) = 2e-17
 Identities = 49/182 (26%), Positives = 68/182 (37%), Gaps = 3/182 (1%)
 Frame = +2

Query: 425 SLSKFSRTV--MKDLSDFGDRRKIELPQSSANALSFXXXXXXXXXXXXXXXXERNRSSVM 598
           S+ + SR V  MK++     RRKIEL ++S  + SF                    SSV 
Sbjct: 86  SMYQSSREVRRMKEMGCNEGRRKIELSRASDTSFSFRIVDSLHCLDEETLQKRSPASSVS 145

Query: 599 S-LNXXXXXXXXXXXXXTEFGDGSYRPILESEVTLNSFLQISLGFEDRENQSAAYVERRQ 775
           S LN                     RP +E   + + F +I    + R+  SA  V    
Sbjct: 146 SNLNPKSVR----------------RPCIE-PCSSDDFTEICPNLDKRDKHSAGIVGSDS 188

Query: 776 TEASKCSHDPAFDLRRDDSELRKRDTGFLVQKSLSSKQVIPYPHLQSQSNCSTPSTLTPH 955
                   +       D +EL +RDT    QKSLS+K  IP     S S  S  ++    
Sbjct: 189 IGNPNFKCEQVVGPLNDGNELLERDTALTFQKSLSAKVEIPCSPSSSGSYLSNGASSKSR 248

Query: 956 FS 961
           FS
Sbjct: 249 FS 250


>ref|XP_002303590.1| predicted protein [Populus trichocarpa] gi|222841022|gb|EEE78569.1|
           predicted protein [Populus trichocarpa]
          Length = 734

 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 44/90 (48%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
 Frame = +3

Query: 186 MDLEFEKFCVVDGSPNTVLPCPRQFSRVEKEKTNAN---HHDTLSPKQRFSEINFRRYRS 356
           M+L+ EK    D SPNTVLP  R+ S+ EK   N       D L  K+ F++I+FR YRS
Sbjct: 1   MELDSEKSSTSDLSPNTVLP-HRRCSKAEKRNANGKLTRKDDILRMKEGFTDISFRHYRS 59

Query: 357 ASCKRTQSRKVVVEGNEILKRGSVYQNSQE 446
           +SCK   SR V ++GN  LKRGS+YQ+S+E
Sbjct: 60  SSCKNVPSRPVGLQGNIELKRGSIYQSSRE 89


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