BLASTX nr result

ID: Bupleurum21_contig00033321 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033321
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520124.1| WRKY transcription factor, putative [Ricinus...   136   2e-30
ref|XP_002267867.2| PREDICTED: probable WRKY transcription facto...   127   9e-28
emb|CBI15258.3| unnamed protein product [Vitis vinifera]              127   9e-28
ref|XP_003528183.1| PREDICTED: probable WRKY transcription facto...   124   8e-27
ref|XP_002511536.1| WRKY transcription factor, putative [Ricinus...   122   4e-26

>ref|XP_002520124.1| WRKY transcription factor, putative [Ricinus communis]
           gi|223540616|gb|EEF42179.1| WRKY transcription factor,
           putative [Ricinus communis]
          Length = 562

 Score =  136 bits (342), Expect = 2e-30
 Identities = 76/138 (55%), Positives = 92/138 (66%), Gaps = 9/138 (6%)
 Frame = -1

Query: 389 SSPKKAETSTST-----SHTEQDNKGLGLGLDCRFDMQPPSSLVLPKQGLLDQSSSEHSL 225
           S PKK E  +S         E +NKGL LGLDC+F+   P S V  K    + +SSE+S 
Sbjct: 154 SEPKKEEKKSSNLSDGNEDDELNNKGLSLGLDCKFE---PDSSVTVK----NNASSENSF 206

Query: 224 DD--VKEDDAETRLPQKGQKTS--EDDEALHQSLAKKARVSVRVRCDTPTMIDGCQWRKY 57
           D+   +E+  ET  P K +KT+   DDEA+ Q+  KK RVSVR RCDTPTM DGCQWRKY
Sbjct: 207 DEDPKEEEPTETWSPNKIRKTTITPDDEAMQQNQIKKTRVSVRARCDTPTMNDGCQWRKY 266

Query: 56  GQKISKGNPCPRAYYRCS 3
           GQKI+KGNPCPRAYYRC+
Sbjct: 267 GQKIAKGNPCPRAYYRCT 284


>ref|XP_002267867.2| PREDICTED: probable WRKY transcription factor 72 [Vitis vinifera]
          Length = 611

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/133 (52%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
 Frame = -1

Query: 389 SSPKKAETSTSTSHTEQDNK--GLGLGLDCRFDMQPPSSLVLPKQGLLDQSSSEHSLDDV 216
           S PKK E + +TS  E D    GL LGLDC+F++  PS               E+S    
Sbjct: 172 SDPKKDEKNKTTSKVEDDGVKGGLSLGLDCKFEVLNPSP--------------ENSFGGP 217

Query: 215 KEDDAETRLPQKGQKTSE--DDEALHQSLAKKARVSVRVRCDTPTMIDGCQWRKYGQKIS 42
           KE   E+  P K  KT    DDE   Q+ AK+ RVSVR RCDTPTM DGCQWRKYGQKI+
Sbjct: 218 KEAAGESWPPSKSLKTMRTGDDEISQQNPAKRCRVSVRARCDTPTMNDGCQWRKYGQKIA 277

Query: 41  KGNPCPRAYYRCS 3
           KGNPCPRAYYRC+
Sbjct: 278 KGNPCPRAYYRCT 290


>emb|CBI15258.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  127 bits (319), Expect = 9e-28
 Identities = 70/133 (52%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
 Frame = -1

Query: 389 SSPKKAETSTSTSHTEQDNK--GLGLGLDCRFDMQPPSSLVLPKQGLLDQSSSEHSLDDV 216
           S PKK E + +TS  E D    GL LGLDC+F++  PS               E+S    
Sbjct: 166 SDPKKDEKNKTTSKVEDDGVKGGLSLGLDCKFEVLNPSP--------------ENSFGGP 211

Query: 215 KEDDAETRLPQKGQKTSE--DDEALHQSLAKKARVSVRVRCDTPTMIDGCQWRKYGQKIS 42
           KE   E+  P K  KT    DDE   Q+ AK+ RVSVR RCDTPTM DGCQWRKYGQKI+
Sbjct: 212 KEAAGESWPPSKSLKTMRTGDDEISQQNPAKRCRVSVRARCDTPTMNDGCQWRKYGQKIA 271

Query: 41  KGNPCPRAYYRCS 3
           KGNPCPRAYYRC+
Sbjct: 272 KGNPCPRAYYRCT 284


>ref|XP_003528183.1| PREDICTED: probable WRKY transcription factor 72-like [Glycine max]
          Length = 615

 Score =  124 bits (311), Expect = 8e-27
 Identities = 65/120 (54%), Positives = 83/120 (69%), Gaps = 6/120 (5%)
 Frame = -1

Query: 344 EQDNKGLGLGLDCRFDMQPPSSLVLPKQGLLDQSSSEHSLDDVKEDDA--ETRLPQKGQK 171
           ++D +GL LGLDC+F+     S +   + L    S  +S+++V +++A  E+  P KG K
Sbjct: 160 KEDKEGLSLGLDCKFETS--KSGISTTEYLPIHQSPNNSVEEVPKEEAAGESWQPGKGIK 217

Query: 170 TSED----DEALHQSLAKKARVSVRVRCDTPTMIDGCQWRKYGQKISKGNPCPRAYYRCS 3
           T+ D    DE   Q+ AKKARV VR RCDTPTM DGCQWRKYGQKISKGNPCPRAYYRC+
Sbjct: 218 TARDATGEDEVSQQNPAKKARVCVRARCDTPTMNDGCQWRKYGQKISKGNPCPRAYYRCT 277


>ref|XP_002511536.1| WRKY transcription factor, putative [Ricinus communis]
           gi|223550651|gb|EEF52138.1| WRKY transcription factor,
           putative [Ricinus communis]
          Length = 651

 Score =  122 bits (305), Expect = 4e-26
 Identities = 65/129 (50%), Positives = 85/129 (65%), Gaps = 4/129 (3%)
 Frame = -1

Query: 377 KAETSTSTSHTEQ--DNKGLGLGLDCRFDMQPPSSLVLPKQGLLDQSSSEHSLDDVKEDD 204
           K++TS+      +  +N+GL LGLDC+F++   S ++   +  L  S  +   +  KE+D
Sbjct: 189 KSKTSSQGKDDNEIANNEGLFLGLDCKFEV---SEVINGNEQSLRPSPVDSFEEQPKEED 245

Query: 203 AETRLPQ--KGQKTSEDDEALHQSLAKKARVSVRVRCDTPTMIDGCQWRKYGQKISKGNP 30
            ET  P+  K      +DEAL Q+  KKARV VR RCDTPTM DGCQWRKYGQKI+KGNP
Sbjct: 246 GETWPPKVLKNTMPGGEDEALQQNPLKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNP 305

Query: 29  CPRAYYRCS 3
           CPRAYYRC+
Sbjct: 306 CPRAYYRCT 314


Top