BLASTX nr result

ID: Bupleurum21_contig00033288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033288
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305168.1| predicted protein [Populus trichocarpa] gi|2...    79   6e-13
ref|XP_003530917.1| PREDICTED: uncharacterized protein LOC100808...    64   3e-08
ref|XP_002531308.1| conserved hypothetical protein [Ricinus comm...    59   6e-07

>ref|XP_002305168.1| predicted protein [Populus trichocarpa] gi|222848132|gb|EEE85679.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 79.3 bits (194), Expect = 6e-13
 Identities = 63/183 (34%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
 Frame = -3

Query: 611 MAIDLYLENSTPLSIMSPRISFSLDISPSDINFPVEQSLL--GSISSPEFDFCNNNSSNQ 438
           MAI+L  ++S  +S   PRISFS D+  SDI  PVE+  L   S+ + +FDFC   S ++
Sbjct: 1   MAIELCSDSSAGVS---PRISFSHDLCISDI-VPVEKRPLRPSSLGNIDFDFCVRKSFDR 56

Query: 437 HYVSAEDIFLDGKLLPTHQQKSTEKXXXXXXXXXXXXXPVKNHSKNYTTTCFDHQTEEXX 258
              SA+++F DGK+LPT  +K T                  + SK Y       Q+ +  
Sbjct: 57  DSSSADELFSDGKILPTEIKKKTASAKQVDPSMPPGQALQDDVSKEY-----QKQSSK-- 109

Query: 257 XXXXXXXXXXXXXXXXXXXXXXSYARSLCPIPLLSRSNSAGSATNSKR--ISKDQGHNHS 84
                                  Y +SLCP+PLLSRS S GS  +SKR  ++KD  H   
Sbjct: 110 -------SFWRFKRSSSLNCASGYGKSLCPLPLLSRSYSTGSTPSSKRAPLTKDTNHKQH 162

Query: 83  RQN 75
           RQ+
Sbjct: 163 RQS 165


>ref|XP_003530917.1| PREDICTED: uncharacterized protein LOC100808505 [Glycine max]
          Length = 268

 Score = 63.9 bits (154), Expect = 3e-08
 Identities = 66/216 (30%), Positives = 93/216 (43%), Gaps = 30/216 (13%)
 Frame = -3

Query: 611 MAIDLYLEN----STPLSIMSPRISFSLDISPSDINFPVEQSLLGSISSP-----EFDFC 459
           MA+DL  EN    S+  S +SPRISFS D S SD+  PVEQ    S SS      +FDFC
Sbjct: 1   MAVDLCSENCVAASSSSSSVSPRISFSHDFSQSDV-IPVEQLPFRSNSSGLNPTIDFDFC 59

Query: 458 NNNSSNQHYVSAEDIFLDGKLLPTHQQKSTEKXXXXXXXXXXXXXPV------------- 318
            + S      SA+++F  G++LPT  ++                 P+             
Sbjct: 60  VSESFELESSSADELFSHGRILPTEVKRKNNAVPPMKQLAPKSTSPLPPPYAAPNGVSTS 119

Query: 317 KNHSKNYT---TTCFDHQTEEXXXXXXXXXXXXXXXXXXXXXXXXSYARSLCPIPLLSRS 147
           KN  K      + C + +  E                           RS CP+PLLSRS
Sbjct: 120 KNLKKEINPKESKCLNDEVYEKQSSKSSFWIFKRSSSCGSGP-----RRSFCPLPLLSRS 174

Query: 146 NSAGSATNSKR----ISKD-QGHNHSRQNSNKTPLV 54
           NS GS+T S +    +SK+   +N+ +Q  + T L+
Sbjct: 175 NSTGSSTPSVKRSHPLSKEGTVNNNIKQKHSSTRLM 210


>ref|XP_002531308.1| conserved hypothetical protein [Ricinus communis]
           gi|223529099|gb|EEF31080.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 143

 Score = 59.3 bits (142), Expect = 6e-07
 Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
 Frame = -3

Query: 611 MAIDLYLENSTPLSIMSPRISFSLDISPSDINFPVEQ--SLL-GSISSPEFDFCNNNSSN 441
           MAI+L  +N+      SPRISFS D   SDI  PVEQ  SL   S+ S +FDFC   S +
Sbjct: 1   MAIELCSDNNNSTGF-SPRISFSHDFCLSDI-VPVEQHHSLRPNSLGSIDFDFCTRKSFD 58

Query: 440 QHYVSAEDIFLDGKLLPTHQQKST 369
           Q    A+++F DGK+LPT  +K T
Sbjct: 59  QESSPADELFSDGKILPTEIKKKT 82


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