BLASTX nr result

ID: Bupleurum21_contig00033274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033274
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546211.1| PREDICTED: pleiotropic drug resistance prote...   161   6e-38
emb|CAN63107.1| hypothetical protein VITISV_025103 [Vitis vinifera]   157   8e-37
emb|CBI36209.3| unnamed protein product [Vitis vinifera]              157   1e-36
ref|XP_003625401.1| Pleiotropic drug resistance protein [Medicag...   156   2e-36
ref|XP_003625400.1| Pleiotropic drug resistance protein [Medicag...   155   2e-36

>ref|XP_003546211.1| PREDICTED: pleiotropic drug resistance protein 1-like [Glycine max]
          Length = 1418

 Score =  161 bits (407), Expect = 6e-38
 Identities = 83/142 (58%), Positives = 99/142 (69%)
 Frame = -1

Query: 426 SVDDDDEEALKWASLQKLSTYNRLRKGLFRDIKCFGEINEVDIRTLGIXXXXXXXXXXXX 247
           S ++DDEEALKWA+L KL TYNRL+KGL   I   GE+NE+D+  +G             
Sbjct: 25  SFEEDDEEALKWAALDKLPTYNRLKKGLL--ITSNGEVNEIDVTDMGTQRRKEVLERLVR 82

Query: 246 VAEVDNEKFLLKIRRRLDRVGIEIPKIEVRFEHLYVAARVYVGSRGSPTFSNFIVNLWEG 67
            AE DNEKFLLK+R R+DRVG+ IP IE RFEHL V A  YVGSR  PTF NFIVN  E 
Sbjct: 83  DAEEDNEKFLLKLRERIDRVGVSIPTIEARFEHLNVEAEAYVGSRALPTFFNFIVNTVES 142

Query: 66  FLHRLHILPSRKKHFSILRDVS 1
           +L+ LHIL S+KKH +IL+DVS
Sbjct: 143 YLNYLHILSSKKKHVTILKDVS 164


>emb|CAN63107.1| hypothetical protein VITISV_025103 [Vitis vinifera]
          Length = 1373

 Score =  157 bits (397), Expect = 8e-37
 Identities = 80/142 (56%), Positives = 102/142 (71%)
 Frame = -1

Query: 426 SVDDDDEEALKWASLQKLSTYNRLRKGLFRDIKCFGEINEVDIRTLGIXXXXXXXXXXXX 247
           S D+DDEEALKWA+L+KL TYNRLRKGL    +  GE +E+DI  LG             
Sbjct: 33  SRDEDDEEALKWAALEKLPTYNRLRKGLLMGSE--GEASEIDIHNLGFQEKKNLVERLVK 90

Query: 246 VAEVDNEKFLLKIRRRLDRVGIEIPKIEVRFEHLYVAARVYVGSRGSPTFSNFIVNLWEG 67
           +AE DNEKFLLK++ R+DRVGI++P+IEVRFEHL + A  +VGSR  P+F NFI N +EG
Sbjct: 91  IAEEDNEKFLLKLKNRIDRVGIDVPEIEVRFEHLTIDAEAFVGSRALPSFHNFIFNKFEG 150

Query: 66  FLHRLHILPSRKKHFSILRDVS 1
            L+ + ILPS+K+ F+IL DVS
Sbjct: 151 ILNAVRILPSKKRKFTILNDVS 172


>emb|CBI36209.3| unnamed protein product [Vitis vinifera]
          Length = 1582

 Score =  157 bits (396), Expect = 1e-36
 Identities = 80/142 (56%), Positives = 101/142 (71%)
 Frame = -1

Query: 426 SVDDDDEEALKWASLQKLSTYNRLRKGLFRDIKCFGEINEVDIRTLGIXXXXXXXXXXXX 247
           S D+DDEEALKWA+L+KL TYNRLRKGL    +  GE +E+DI  LG             
Sbjct: 202 SRDEDDEEALKWAALEKLPTYNRLRKGLLMGSE--GEASEIDIHNLGFQEKKNLVERLVK 259

Query: 246 VAEVDNEKFLLKIRRRLDRVGIEIPKIEVRFEHLYVAARVYVGSRGSPTFSNFIVNLWEG 67
           +AE DNEKFLLK++ R+DRVG+++P+IEVRFEHL + A  +VGSR  P+F NFI N  EG
Sbjct: 260 IAEEDNEKFLLKLKNRIDRVGVDVPEIEVRFEHLTIDAEAFVGSRALPSFHNFIFNKLEG 319

Query: 66  FLHRLHILPSRKKHFSILRDVS 1
            L+ +HILPS+KK  +IL DVS
Sbjct: 320 ILNAVHILPSKKKKCTILNDVS 341


>ref|XP_003625401.1| Pleiotropic drug resistance protein [Medicago truncatula]
           gi|355500416|gb|AES81619.1| Pleiotropic drug resistance
           protein [Medicago truncatula]
          Length = 1483

 Score =  156 bits (394), Expect = 2e-36
 Identities = 78/139 (56%), Positives = 101/139 (72%)
 Frame = -1

Query: 417 DDDEEALKWASLQKLSTYNRLRKGLFRDIKCFGEINEVDIRTLGIXXXXXXXXXXXXVAE 238
           +DDEEALKWA++Q L T+ RLRKGL   ++  GE  E+DI  LG+            +AE
Sbjct: 31  EDDEEALKWAAIQNLPTFARLRKGLLTSLQ--GEAVEIDIEKLGLQERKDLLERLVRLAE 88

Query: 237 VDNEKFLLKIRRRLDRVGIEIPKIEVRFEHLYVAARVYVGSRGSPTFSNFIVNLWEGFLH 58
            DNEKFLLK++ R+DRVG+++P IEVRFEHL + A   VGSR  PTF+NF+VN+ EG L+
Sbjct: 89  EDNEKFLLKLKDRMDRVGVDLPTIEVRFEHLNIEAEARVGSRSLPTFTNFMVNIVEGLLN 148

Query: 57  RLHILPSRKKHFSILRDVS 1
            LH+LPSRK+H +ILRDVS
Sbjct: 149 SLHVLPSRKQHLNILRDVS 167


>ref|XP_003625400.1| Pleiotropic drug resistance protein [Medicago truncatula]
           gi|355500415|gb|AES81618.1| Pleiotropic drug resistance
           protein [Medicago truncatula]
          Length = 1398

 Score =  155 bits (393), Expect = 2e-36
 Identities = 76/139 (54%), Positives = 102/139 (73%)
 Frame = -1

Query: 417 DDDEEALKWASLQKLSTYNRLRKGLFRDIKCFGEINEVDIRTLGIXXXXXXXXXXXXVAE 238
           +DDEEALKWA++QKL T+ RLRKGL   ++  GE  E+D+  LG+            +AE
Sbjct: 31  EDDEEALKWAAIQKLPTFERLRKGLLTSLQ--GEATEIDVENLGLQERKDLLERLVRLAE 88

Query: 237 VDNEKFLLKIRRRLDRVGIEIPKIEVRFEHLYVAARVYVGSRGSPTFSNFIVNLWEGFLH 58
            DNEKFLLK++ R+DRVGI++P IEVRFE L + A  +VG+R  PTF+NF+VN+ EG L+
Sbjct: 89  EDNEKFLLKLKDRIDRVGIDLPTIEVRFEGLNIEAEAHVGNRSLPTFTNFMVNIVEGLLN 148

Query: 57  RLHILPSRKKHFSILRDVS 1
            LH+LPSRK+H +IL+DVS
Sbjct: 149 SLHVLPSRKQHLNILKDVS 167


Top