BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033258
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]    61   3e-15
emb|CBI14898.3| unnamed protein product [Vitis vinifera]               61   3e-15
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...    42   2e-07

>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score = 60.8 bits (146), Expect(2) = 3e-15
 Identities = 34/99 (34%), Positives = 46/99 (46%)
 Frame = +1

Query: 1    PGSCGYDCSNEEEINHKCHNSNSDITEEQPGCFSRTMNLHKKLHPSDKRQMIVFSKEQQK 180
            P   G++  + +E    C        E QP C   T  LHKKL  S+  QM     + Q 
Sbjct: 918  PKGTGFEVGSSKEEQSSC---GCQEPENQPNCLFNTFGLHKKLRSSEASQMTCLRYQAQN 974

Query: 181  NLALPNHDNTLPQTYFCASDPCSYSSSCKNYTKCHGNED 297
             LAL    NT  + YF A+D  ++SSS  N+  C  +ED
Sbjct: 975  KLALSVPKNTSFEPYFWANDRYAFSSSSNNFNSCPRDED 1013



 Score = 45.4 bits (106), Expect(2) = 3e-15
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +2

Query: 302  RKDSRVFCWRTPTFPFKKAWQLRHQ 376
            R+DS+V CW  PTFP KKAWQ RH+
Sbjct: 1016 REDSKVHCWGAPTFPLKKAWQSRHR 1040


>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score = 60.8 bits (146), Expect(2) = 3e-15
 Identities = 34/99 (34%), Positives = 46/99 (46%)
 Frame = +1

Query: 1    PGSCGYDCSNEEEINHKCHNSNSDITEEQPGCFSRTMNLHKKLHPSDKRQMIVFSKEQQK 180
            P   G++  + +E    C        E QP C   T  LHKKL  S+  QM     + Q 
Sbjct: 736  PKGTGFEVGSSKEEQSSC---GCQEPENQPNCLFNTFGLHKKLRSSEASQMTCLRYQAQN 792

Query: 181  NLALPNHDNTLPQTYFCASDPCSYSSSCKNYTKCHGNED 297
             LAL    NT  + YF A+D  ++SSS  N+  C  +ED
Sbjct: 793  KLALSVPKNTSFEPYFWANDRYAFSSSSNNFNSCPRDED 831



 Score = 45.4 bits (106), Expect(2) = 3e-15
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = +2

Query: 302 RKDSRVFCWRTPTFPFKKAWQLRHQ 376
           R+DS+V CW  PTFP KKAWQ RH+
Sbjct: 834 REDSKVHCWGAPTFPLKKAWQSRHR 858


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223550389|gb|EEF51876.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 1025

 Score = 42.4 bits (98), Expect(2) = 2e-07
 Identities = 22/63 (34%), Positives = 33/63 (52%)
 Frame = +1

Query: 4    GSCGYDCSNEEEINHKCHNSNSDITEEQPGCFSRTMNLHKKLHPSDKRQMIVFSKEQQKN 183
            GS GY+  + EE            TEEQP CFSRT+ L K+L  ++  +++    ++   
Sbjct: 897  GSLGYETFSSEE------------TEEQPNCFSRTLRLQKRLPSTNHSRIVCMGNQEANK 944

Query: 184  LAL 192
            LAL
Sbjct: 945  LAL 947



 Score = 37.4 bits (85), Expect(2) = 2e-07
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +2

Query: 305  KDSRVFCWRTPTFPFKKAWQLRH 373
            ++S   CWRTPTF   KAWQL H
Sbjct: 985  ENSAALCWRTPTFTQSKAWQLTH 1007