BLASTX nr result

ID: Bupleurum21_contig00033247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033247
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]   129   3e-28
ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002521191.1| conserved hypothetical protein [Ricinus comm...   110   1e-22
emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]   109   3e-22
ref|XP_002517798.1| conserved hypothetical protein [Ricinus comm...   101   7e-20

>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score =  129 bits (323), Expect = 3e-28
 Identities = 58/126 (46%), Positives = 83/126 (65%)
 Frame = +1

Query: 1   LVKSEKISEISVSLGFANNFAVNSVGRGGGLAVLWNRNVMCTILSSSSNHIDVEIWDKNV 180
           LV S ++ ++   LGF   F V+ VGRGGGLA LW +  M ++L  S +HID+E+ +++ 
Sbjct: 344 LVHSAQVEKLKSKLGFEGAFCVDRVGRGGGLAFLWRKAGMFSLLXYSQSHIDMEVSEEDG 403

Query: 181 PSWRITGFYGFPERQRRKDSWEFLKSLAAVSQIPWCVFGDFNDMRYASDKMGNIDHPQSL 360
             WR+TGFYGFP+R +R  SW  L+SL + S +PWC  GDFND+    +K G++ HP  L
Sbjct: 404 LQWRVTGFYGFPDRSQRHLSWNLLRSLYSASSLPWCCLGDFNDIVCNEEKRGSVPHPPWL 463

Query: 361 LDGFSA 378
           + GF A
Sbjct: 464 IRGFCA 469


>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  116 bits (290), Expect = 2e-24
 Identities = 53/113 (46%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
 Frame = +1

Query: 40  LGFANN--FAVNSVGRGGGLAVLWNRNVMCTILSSSSNHIDVEIWDKNVPSWRITGFYGF 213
           LG  NN  FAV+ +GRGGGLAVLW  +   ++L  S+NHID+ + + N   WR TG+YG 
Sbjct: 34  LGLGNNGFFAVDRLGRGGGLAVLWRSSASVSLLGYSNNHIDLLVVEANNFIWRFTGYYGL 93

Query: 214 PERQRRKDSWEFLKSLAAVSQIPWCVFGDFNDMRYASDKMGNIDHPQSLLDGF 372
           P+R R+ +SW  L++L+  S +PW   GD+NDM  A +K G + HP S   GF
Sbjct: 94  PDRNRKMESWNLLRALSRQSALPWVCMGDYNDMLCAEEKRGRVLHPNSSFQGF 146


>ref|XP_002521191.1| conserved hypothetical protein [Ricinus communis]
           gi|223539605|gb|EEF41191.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/103 (48%), Positives = 63/103 (61%)
 Frame = +1

Query: 58  FAVNSVGRGGGLAVLWNRNVMCTILSSSSNHIDVEIWDKNVPSWRITGFYGFPERQRRKD 237
           F +  VG GGGL +LW    M  +LS SSNHID  +   N+ +W +T FYGFP+R RRKD
Sbjct: 229 FFIAGVGIGGGLVLLWKEKNMAKLLSFSSNHIDASVLIPNMKAWHLTYFYGFPKRARRKD 288

Query: 238 SWEFLKSLAAVSQIPWCVFGDFNDMRYASDKMGNIDHPQSLLD 366
           SW+ L  L  VS  PWCV  DFND+    +K G + HP   L+
Sbjct: 289 SWDLLHKLNTVSTFPWCVIEDFNDLMGQHEKKGRLRHPNHSLN 331


>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/121 (41%), Positives = 72/121 (59%)
 Frame = +1

Query: 10  SEKISEISVSLGFANNFAVNSVGRGGGLAVLWNRNVMCTILSSSSNHIDVEIWDKNVPSW 189
           S +ISEI+  L +  ++ VN  G   GL ++W      TIL S   +ID  +  +N   +
Sbjct: 382 SARISEIANKLNYEGSYGVNCRGHSAGLGLIWRCKDKVTILGSHDRYIDAIVTLENQRMF 441

Query: 190 RITGFYGFPERQRRKDSWEFLKSLAAVSQIPWCVFGDFNDMRYASDKMGNIDHPQSLLDG 369
           R+TGFYG   R +R  SWE L++L A   +PWCV GDFN++ + S+K GN  HP SL++ 
Sbjct: 442 RLTGFYGLANRSQRSSSWEILRNLHAAHSLPWCVIGDFNELMHQSEKCGNHPHPGSLIEA 501

Query: 370 F 372
           F
Sbjct: 502 F 502


>ref|XP_002517798.1| conserved hypothetical protein [Ricinus communis]
           gi|223543070|gb|EEF44605.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 228

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/116 (41%), Positives = 66/116 (56%)
 Frame = +1

Query: 1   LVKSEKISEISVSLGFANNFAVNSVGRGGGLAVLWNRNVMCTILSSSSNHIDVEIWDKNV 180
           LV   KI +I V L F   F V+   R GG+ V++    +  + S S N + +E+ D   
Sbjct: 111 LVDPAKIEDIRVKLYFKGWFTVHREDRSGGIGVVYRSRNLFNLCSFSQNQVVLEVDDVKR 170

Query: 181 PSWRITGFYGFPERQRRKDSWEFLKSLAAVSQIPWCVFGDFNDMRYASDKMGNIDH 348
             WRIT FYG+P+R RR+DSW  LK L   S +PWC  GD+N+M    DK G ++H
Sbjct: 171 GRWRITMFYGYPKRHRRRDSWNHLKGLHVASLLPWCYVGDYNEMLSPDDKKGRVEH 226


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