BLASTX nr result

ID: Bupleurum21_contig00033202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033202
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548444.1| PREDICTED: uncharacterized protein LOC100812...    70   1e-10
ref|XP_003622491.1| Methylenetetrahydrofolate reductase, partial...    70   2e-10
ref|XP_002511917.1| protein binding protein, putative [Ricinus c...    70   2e-10
ref|XP_002275425.2| PREDICTED: uncharacterized protein LOC100265...    68   7e-10
emb|CBI40405.3| unnamed protein product [Vitis vinifera]               68   7e-10

>ref|XP_003548444.1| PREDICTED: uncharacterized protein LOC100812811 [Glycine max]
          Length = 586

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/62 (56%), Positives = 41/62 (66%)
 Frame = +1

Query: 148 CFSGGVIGPDGNKWHLGKWCKRGQNKXXXXXXXXXXXXXXXXXNLIAVGADGRGGQIKVL 327
           CFSGG++GPDG   +LGKWCKRGQN                  +LIAVGADGRGG+IKVL
Sbjct: 487 CFSGGLLGPDGTHRYLGKWCKRGQNS------EPSSAKRSSDGDLIAVGADGRGGRIKVL 540

Query: 328 RS 333
           R+
Sbjct: 541 RT 542


>ref|XP_003622491.1| Methylenetetrahydrofolate reductase, partial [Medicago truncatula]
           gi|355497506|gb|AES78709.1| Methylenetetrahydrofolate
           reductase, partial [Medicago truncatula]
          Length = 668

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/65 (53%), Positives = 41/65 (63%)
 Frame = +1

Query: 139 VDSCFSGGVIGPDGNKWHLGKWCKRGQNKXXXXXXXXXXXXXXXXXNLIAVGADGRGGQI 318
           VD CFSGG++GPDG +  LGKWCKRGQ                   NLI+VGADGRGG +
Sbjct: 448 VDICFSGGLLGPDGTQRFLGKWCKRGQT----------GESTSTKGNLISVGADGRGGTV 497

Query: 319 KVLRS 333
           KVLR+
Sbjct: 498 KVLRN 502


>ref|XP_002511917.1| protein binding protein, putative [Ricinus communis]
           gi|223549097|gb|EEF50586.1| protein binding protein,
           putative [Ricinus communis]
          Length = 525

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/65 (53%), Positives = 42/65 (64%)
 Frame = +1

Query: 142 DSCFSGGVIGPDGNKWHLGKWCKRGQNKXXXXXXXXXXXXXXXXXNLIAVGADGRGGQIK 321
           D CFS G++GPDG   +LGKWCKR +NK                 +LIAVG+DGRGG+IK
Sbjct: 422 DICFSSGLLGPDGTNRYLGKWCKRSRNK----EPSALHSASTSSGDLIAVGSDGRGGRIK 477

Query: 322 VLRSL 336
           VLRSL
Sbjct: 478 VLRSL 482


>ref|XP_002275425.2| PREDICTED: uncharacterized protein LOC100265462 [Vitis vinifera]
          Length = 597

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/69 (49%), Positives = 41/69 (59%)
 Frame = +1

Query: 127 FKQKVDSCFSGGVIGPDGNKWHLGKWCKRGQNKXXXXXXXXXXXXXXXXXNLIAVGADGR 306
           F +  D CF+ G+IGPDG   +LGKWCKR +                   +LIAVGADGR
Sbjct: 485 FAKPGDKCFAPGLIGPDGTPRYLGKWCKRDKANGSNPSSVGMQGSSTSTGDLIAVGADGR 544

Query: 307 GGQIKVLRS 333
           GG+IKVLRS
Sbjct: 545 GGRIKVLRS 553


>emb|CBI40405.3| unnamed protein product [Vitis vinifera]
          Length = 564

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/69 (49%), Positives = 41/69 (59%)
 Frame = +1

Query: 127 FKQKVDSCFSGGVIGPDGNKWHLGKWCKRGQNKXXXXXXXXXXXXXXXXXNLIAVGADGR 306
           F +  D CF+ G+IGPDG   +LGKWCKR +                   +LIAVGADGR
Sbjct: 452 FAKPGDKCFAPGLIGPDGTPRYLGKWCKRDKANGSNPSSVGMQGSSTSTGDLIAVGADGR 511

Query: 307 GGQIKVLRS 333
           GG+IKVLRS
Sbjct: 512 GGRIKVLRS 520


Top