BLASTX nr result

ID: Bupleurum21_contig00033169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033169
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39264.3| unnamed protein product [Vitis vinifera]               59   4e-07
gb|AGF69238.1| TMV resistance protein N-like protein 1 [Vitis la...    56   3e-06
ref|XP_002282884.2| PREDICTED: TMV resistance protein N-like [Vi...    56   3e-06
emb|CBI33323.3| unnamed protein product [Vitis vinifera]               56   3e-06
emb|CAN70507.1| hypothetical protein VITISV_024109 [Vitis vinifera]    56   3e-06

>emb|CBI39264.3| unnamed protein product [Vitis vinifera]
          Length = 1054

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/80 (41%), Positives = 49/80 (61%)
 Frame = +2

Query: 5   EMHSLSRLDANGTAIQELPDSIERLSRLQSLWFDSCKKHKYVPNSIWNLTSLVTLCLPAE 184
           EM SL +L+ + T I  LP SI +L+ L+ L   SCKK   +P+SI++L+SL TL L A 
Sbjct: 602 EMRSLRKLNLSQTGIMGLPSSISKLNGLKELDLSSCKKLSSLPDSIYSLSSLQTLNLFAC 661

Query: 185 NVLTSMPPVTVNYMNKLEYL 244
           + L   P + +  +  L+YL
Sbjct: 662 SRLVGFPGINIGSLKALKYL 681


>gb|AGF69238.1| TMV resistance protein N-like protein 1 [Vitis labrusca]
          Length = 1514

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/96 (34%), Positives = 52/96 (54%)
 Frame = +2

Query: 2   GEMHSLSRLDANGTAIQELPDSIERLSRLQSLWFDSCKKHKYVPNSIWNLTSLVTLCLPA 181
           G+M  L  LD +GTAI +LP SI  L+ LQ+L    C K   +PN I +L+SL  L L  
Sbjct: 693 GDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGH 752

Query: 182 ENVLTSMPPVTVNYMNKLEYLHFRCNIRLWLPTILS 289
            N++    P  + +++ L+ L+        +PT ++
Sbjct: 753 CNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTIN 788



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
 Frame = +2

Query: 5    EMHSLSRLDANGTAIQELPDSIERLSRLQSLWFDSCKKHKYVPNSIWNLTSLVTLCL--- 175
            +M SL +L  NGTAI+E+P SI+RL  LQ L   +CK    +P SI NLTS  TL +   
Sbjct: 1150 DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1209

Query: 176  PAENVLTSMPPVTVNYMNKLEYL 244
            P  N L    P  +  +  LEYL
Sbjct: 1210 PNFNKL----PDNLGRLQSLEYL 1228


>ref|XP_002282884.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1408

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/96 (34%), Positives = 52/96 (54%)
 Frame = +2

Query: 2   GEMHSLSRLDANGTAIQELPDSIERLSRLQSLWFDSCKKHKYVPNSIWNLTSLVTLCLPA 181
           G+M  L  LD +GTAI +LP SI  L+ LQ+L    C K   +PN I +L+SL  L L  
Sbjct: 705 GDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGH 764

Query: 182 ENVLTSMPPVTVNYMNKLEYLHFRCNIRLWLPTILS 289
            N++    P  + +++ L+ L+        +PT ++
Sbjct: 765 CNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTIN 800



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
 Frame = +2

Query: 5    EMHSLSRLDANGTAIQELPDSIERLSRLQSLWFDSCKKHKYVPNSIWNLTSLVTLCL--- 175
            +M SL +L  NGTAI+E+P SI+RL  LQ L   +CK    +P SI NLTS  TL +   
Sbjct: 1162 DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1221

Query: 176  PAENVLTSMPPVTVNYMNKLEYL 244
            P  N L    P  +  +  LEYL
Sbjct: 1222 PNFNKL----PDNLGRLQSLEYL 1240


>emb|CBI33323.3| unnamed protein product [Vitis vinifera]
          Length = 1186

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/96 (34%), Positives = 52/96 (54%)
 Frame = +2

Query: 2   GEMHSLSRLDANGTAIQELPDSIERLSRLQSLWFDSCKKHKYVPNSIWNLTSLVTLCLPA 181
           G+M  L  LD +GTAI +LP SI  L+ LQ+L    C K   +PN I +L+SL  L L  
Sbjct: 522 GDMRELRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQIPNHICHLSSLKELDLGH 581

Query: 182 ENVLTSMPPVTVNYMNKLEYLHFRCNIRLWLPTILS 289
            N++    P  + +++ L+ L+        +PT ++
Sbjct: 582 CNIMEGGIPSDICHLSSLQKLNLEQGHFSSIPTTIN 617



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
 Frame = +2

Query: 5    EMHSLSRLDANGTAIQELPDSIERLSRLQSLWFDSCKKHKYVPNSIWNLTSLVTLCL--- 175
            +M SL +L  NGTAI+E+P SI+RL  LQ L   +CK    +P SI NLTS  TL +   
Sbjct: 979  DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1038

Query: 176  PAENVLTSMPPVTVNYMNKLEYL 244
            P  N L    P  +  +  LEYL
Sbjct: 1039 PNFNKL----PDNLGRLQSLEYL 1057


>emb|CAN70507.1| hypothetical protein VITISV_024109 [Vitis vinifera]
          Length = 1350

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
 Frame = +2

Query: 5    EMHSLSRLDANGTAIQELPDSIERLSRLQSLWFDSCKKHKYVPNSIWNLTSLVTLCL--- 175
            +M SL +L  NGTAI+E+P SI+RL  LQ L   +CK    +P SI NLTS  TL +   
Sbjct: 992  DMESLRKLYLNGTAIKEIPSSIQRLRGLQYLLLRNCKNLVNLPESICNLTSFKTLVVSRC 1051

Query: 176  PAENVLTSMPPVTVNYMNKLEYL 244
            P  N L    P  +  +  LEYL
Sbjct: 1052 PNFNKL----PDNLGRLQSLEYL 1070



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 33/96 (34%), Positives = 51/96 (53%)
 Frame = +2

Query: 2   GEMHSLSRLDANGTAIQELPDSIERLSRLQSLWFDSCKKHKYVPNSIWNLTSLVTLCLPA 181
           G+M     LD +GTAI +LP SI  L+ LQ+L    C K   VPN I +L+SL  L L  
Sbjct: 535 GDMREQRVLDLSGTAIMDLPSSITHLNGLQTLLLQECLKLHQVPNHICHLSSLKVLDLGH 594

Query: 182 ENVLTSMPPVTVNYMNKLEYLHFRCNIRLWLPTILS 289
            N++    P  + +++ L+ L+        +PT ++
Sbjct: 595 CNIMEGGIPSDICHLSSLQKLNLERGHFSSIPTTIN 630


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