BLASTX nr result

ID: Bupleurum21_contig00033148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033148
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533653.1| transcription factor, putative [Ricinus comm...   132   3e-29
ref|XP_003527675.1| PREDICTED: uncharacterized protein LOC100805...   131   6e-29
ref|XP_002327777.1| short internodes 2 [Populus trichocarpa] gi|...   131   6e-29
ref|XP_003550407.1| PREDICTED: uncharacterized protein LOC100807...   130   1e-28
ref|NP_190675.4| Lateral root primordium (LRP) protein-like prot...   125   3e-27

>ref|XP_002533653.1| transcription factor, putative [Ricinus communis]
           gi|223526448|gb|EEF28724.1| transcription factor,
           putative [Ricinus communis]
          Length = 350

 Score =  132 bits (332), Expect = 3e-29
 Identities = 68/112 (60%), Positives = 74/112 (66%)
 Frame = -3

Query: 337 HHHHQQQLQDFYPAAAAIGGDRSHRSSGVDNLVSDESRSAGGFLMMRXXXXXXXXGVLSC 158
           H   QQQ QD Y +AA +G   S  S       SDES S   F+MMR          +SC
Sbjct: 68  HQSLQQQQQDLYSSAAGLGVGPSRSSINF----SDESSSRSAFMMMRSSSGGSS---MSC 120

Query: 157 QDCGNQAKKDCSHMRCRTCCKSRGFHCQTHVKSTWVPVAKRRERLQQLAALQ 2
           QDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWVP +KRRER QQL A+Q
Sbjct: 121 QDCGNQAKKDCVHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLVAIQ 172


>ref|XP_003527675.1| PREDICTED: uncharacterized protein LOC100805274 [Glycine max]
          Length = 301

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/112 (58%), Positives = 75/112 (66%)
 Frame = -3

Query: 337 HHHHQQQLQDFYPAAAAIGGDRSHRSSGVDNLVSDESRSAGGFLMMRXXXXXXXXGVLSC 158
           H H  Q  Q+++  A  +G  R +RS  V   VSD   +  G  +MR          ++C
Sbjct: 53  HQHQNQAYQNYF--AFGVGPSRRNRSEDVSLCVSDHESTRFGLTVMRSGVSSSMS--MNC 108

Query: 157 QDCGNQAKKDCSHMRCRTCCKSRGFHCQTHVKSTWVPVAKRRERLQQLAALQ 2
           QDCGNQAKKDCSH+RCRTCCKSRGF CQTHVKSTWVP AKRRER QQLAALQ
Sbjct: 109 QDCGNQAKKDCSHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERHQQLAALQ 160


>ref|XP_002327777.1| short internodes 2 [Populus trichocarpa]
           gi|222836862|gb|EEE75255.1| short internodes 2 [Populus
           trichocarpa]
          Length = 344

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/120 (54%), Positives = 74/120 (61%), Gaps = 8/120 (6%)
 Frame = -3

Query: 337 HHHHQQQL--------QDFYPAAAAIGGDRSHRSSGVDNLVSDESRSAGGFLMMRXXXXX 182
           HHHHQ+ L        QD Y +A  +G   S  S  + +  S  S +A  F+MMR     
Sbjct: 57  HHHHQELLHQRHQNPQQDLYSSAVGLGVGPSRASINISDESSSRSAAAAAFMMMRPVGSG 116

Query: 181 XXXGVLSCQDCGNQAKKDCSHMRCRTCCKSRGFHCQTHVKSTWVPVAKRRERLQQLAALQ 2
               + SCQDCGNQAKKDC HMRCRTCCKSRGF CQTHVKSTWVP +KRRER  QL   Q
Sbjct: 117 VGGSI-SCQDCGNQAKKDCVHMRCRTCCKSRGFECQTHVKSTWVPASKRRERQHQLTIFQ 175


>ref|XP_003550407.1| PREDICTED: uncharacterized protein LOC100807290 [Glycine max]
          Length = 326

 Score =  130 bits (326), Expect = 1e-28
 Identities = 66/119 (55%), Positives = 77/119 (64%), Gaps = 7/119 (5%)
 Frame = -3

Query: 337 HHHHQQQLQDFYPAAAAIGGDRSHRSSGVDNL-------VSDESRSAGGFLMMRXXXXXX 179
           +HHH Q L +FY          ++ SS  +N+        SDES   G F +MR      
Sbjct: 50  YHHHHQNLTNFYSFGVGPSRRNNNNSSSNNNVNDEVSVSFSDESNRFG-FTVMRSGGGGV 108

Query: 178 XXGVLSCQDCGNQAKKDCSHMRCRTCCKSRGFHCQTHVKSTWVPVAKRRERLQQLAALQ 2
             G ++CQDCGNQAKKDC H+RCRTCCKSRGF CQTHVKSTWVP AKRRER QQL+ALQ
Sbjct: 109 GGGGMNCQDCGNQAKKDCQHLRCRTCCKSRGFQCQTHVKSTWVPAAKRRERQQQLSALQ 167


>ref|NP_190675.4| Lateral root primordium (LRP) protein-like protein [Arabidopsis
           thaliana] gi|332645224|gb|AEE78745.1| Lateral root
           primordium (LRP) protein-like protein [Arabidopsis
           thaliana]
          Length = 370

 Score =  125 bits (315), Expect = 3e-27
 Identities = 64/114 (56%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
 Frame = -3

Query: 337 HHHHQQQLQDFYPAAAAIG-GDRSHRSSGVDNLVSDESRS-AGGFLMMRXXXXXXXXGVL 164
           H  HQQ+L D Y +AA +G G  +H    +    S      A   +M+R        G +
Sbjct: 84  HQQHQQRL-DLYSSAAGLGVGPSNHNQFDISGETSTAGAGRAAAMMMIRSGGSGGGSGGV 142

Query: 163 SCQDCGNQAKKDCSHMRCRTCCKSRGFHCQTHVKSTWVPVAKRRERLQQLAALQ 2
           SCQDCGNQAKKDCSHMRCRTCCKSRGF C THV+STWVP AKRRER QQLA +Q
Sbjct: 143 SCQDCGNQAKKDCSHMRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQLATVQ 196


Top