BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033117
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAW47278.1| ribosomal protein S4 [Lonicera sp. Bergthorsson 0...    76   5e-12
ref|YP_006291840.1| rps4 gene product (mitochondrion) [Daucus ca...    76   5e-12
ref|YP_002608192.1| ribosomal protein S4 [Carica papaya] gi|1705...    76   6e-12
ref|YP_002608399.1| ribosomal protein S4 [Vitis vinifera] gi|209...    76   6e-12
ref|YP_173472.1| ribosomal protein S4 [Nicotiana tabacum]              75   1e-11

>gb|AAW47278.1| ribosomal protein S4 [Lonicera sp. Bergthorsson 0301]
          Length = 318

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 38/51 (74%), Positives = 43/51 (84%)
 Frame = -2

Query: 591 SNRVDHNRTKRNV*NFKSLFL*KRSNEKKRNLPT*TRSPIVYNSSLFSNST 439
           S+  +HNR KRN+ +FKS+FL KR NEK RNLPT TRSPIVYNSSLFSNST
Sbjct: 225 SSFAEHNRMKRNLYHFKSIFLSKRRNEKNRNLPTRTRSPIVYNSSLFSNST 275


>ref|YP_006291840.1| rps4 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374081953|gb|AEY81145.1| ribosomal protein S4
           (mitochondrion) [Daucus carota subsp. sativus]
          Length = 279

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 39/56 (69%), Positives = 44/56 (78%)
 Frame = -2

Query: 591 SNRVDHNRTKRNV*NFKSLFL*KRSNEKKRNLPT*TRSPIVYNSSLFSNST*LCTP 424
           S+  +HNR KRN+ +FKSLFL KR NEK RNLPT TRSPIVYNSSL+SNST    P
Sbjct: 161 SSFAEHNRMKRNLYHFKSLFLSKRRNEKNRNLPTRTRSPIVYNSSLYSNSTYCSAP 216


>ref|YP_002608192.1| ribosomal protein S4 [Carica papaya] gi|170522371|gb|ACB20481.1|
           ribosomal protein S4, partial (mitochondrion) [Carica
           papaya]
          Length = 352

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 38/51 (74%), Positives = 43/51 (84%)
 Frame = -2

Query: 591 SNRVDHNRTKRNV*NFKSLFL*KRSNEKKRNLPT*TRSPIVYNSSLFSNST 439
           S+  +HNR KRN+ +FKSLFL KR NEK RNLPT TRSPIVYNSSL+SNST
Sbjct: 234 SSFAEHNRMKRNLYHFKSLFLSKRRNEKNRNLPTRTRSPIVYNSSLYSNST 284


>ref|YP_002608399.1| ribosomal protein S4 [Vitis vinifera] gi|209954196|emb|CAQ77661.1|
           ribosomal protein S4 [Vitis vinifera]
           gi|239764730|gb|ACS15201.1| ribosomal protein S4 [Vitis
           vinifera]
          Length = 362

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 38/51 (74%), Positives = 43/51 (84%)
 Frame = -2

Query: 591 SNRVDHNRTKRNV*NFKSLFL*KRSNEKKRNLPT*TRSPIVYNSSLFSNST 439
           S+  +HNR KRN+ +FKSLFL KR NEK RNLPT TRSPIVYNSSL+SNST
Sbjct: 244 SSFAEHNRMKRNLYHFKSLFLSKRRNEKNRNLPTRTRSPIVYNSSLYSNST 294


>ref|YP_173472.1| ribosomal protein S4 [Nicotiana tabacum]
          Length = 349

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = -2

Query: 591 SNRVDHNRTKRNV*NFKSLFL*KRSNEKKRNLPT*TRSPIVYNSSLFSNST 439
           S+  +HNR KRN+ +FKSLFL KR NEK RN+PT TRSPIVYNSSL+SNST
Sbjct: 231 SSFAEHNRMKRNLYHFKSLFLSKRRNEKNRNIPTRTRSPIVYNSSLYSNST 281