BLASTX nr result
ID: Bupleurum21_contig00033098
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00033098
(304 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|2... 116 2e-27
ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|2... 116 2e-27
ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat... 105 2e-24
ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat... 107 9e-24
ref|XP_002524089.1| pentatricopeptide repeat-containing protein,... 97 2e-21
>ref|XP_002308333.1| predicted protein [Populus trichocarpa] gi|222854309|gb|EEE91856.1|
predicted protein [Populus trichocarpa]
Length = 1048
Score = 116 bits (290), Expect(2) = 2e-27
Identities = 51/86 (59%), Positives = 72/86 (83%)
Frame = +3
Query: 45 EEKNAISEKIYGIIIHAYLRRNETNKALEIFQNMKNYGLLPSVTTYTNLMQHLFRLNEFQ 224
+ K+ + K+YGIII+ YLRRNE +KAL++FQ+MK +G LP+ +TYT LMQHLFR NE+Q
Sbjct: 406 KRKDFVDGKVYGIIINGYLRRNELSKALDLFQSMKEFGHLPTTSTYTELMQHLFRSNEYQ 465
Query: 225 KASELYDEMIEKGLELDCIAIMSMVA 302
K ELYDEM+E+G+E+D +A+M++VA
Sbjct: 466 KCCELYDEMLERGVEIDSVAVMAIVA 491
Score = 30.8 bits (68), Expect(2) = 2e-27
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 1 KADRVTDALEIVDIMKRK 54
+A+R+ DALEIV+IMKRK
Sbjct: 391 RANRIADALEIVEIMKRK 408
>ref|XP_002333469.1| predicted protein [Populus trichocarpa] gi|222836989|gb|EEE75382.1|
predicted protein [Populus trichocarpa]
Length = 1048
Score = 116 bits (290), Expect(2) = 2e-27
Identities = 51/86 (59%), Positives = 72/86 (83%)
Frame = +3
Query: 45 EEKNAISEKIYGIIIHAYLRRNETNKALEIFQNMKNYGLLPSVTTYTNLMQHLFRLNEFQ 224
+ K+ + K+YGIII+ YLRRNE +KAL++FQ+MK +G LP+ +TYT LMQHLFR NE+Q
Sbjct: 406 KRKDFVDGKVYGIIINGYLRRNELSKALDLFQSMKEFGHLPTTSTYTELMQHLFRSNEYQ 465
Query: 225 KASELYDEMIEKGLELDCIAIMSMVA 302
K ELYDEM+E+G+E+D +A+M++VA
Sbjct: 466 KCCELYDEMLERGVEIDSVAVMAIVA 491
Score = 30.8 bits (68), Expect(2) = 2e-27
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 1 KADRVTDALEIVDIMKRK 54
+A+R+ DALEIV+IMKRK
Sbjct: 391 RANRIADALEIVEIMKRK 408
>ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 105 bits (262), Expect(2) = 2e-24
Identities = 47/86 (54%), Positives = 65/86 (75%)
Frame = +3
Query: 45 EEKNAISEKIYGIIIHAYLRRNETNKALEIFQNMKNYGLLPSVTTYTNLMQHLFRLNEFQ 224
+++ + K+YGIII YLRRN+ KA ++ Q M G LP+++TYT LMQHLFRLNE+Q
Sbjct: 407 KKRKVVDAKVYGIIISGYLRRNDIPKAFDVLQTMTESGYLPTISTYTELMQHLFRLNEYQ 466
Query: 225 KASELYDEMIEKGLELDCIAIMSMVA 302
K +LYDEM+E+G+E D +AI +MVA
Sbjct: 467 KGCKLYDEMLERGVEPDSVAITAMVA 492
Score = 32.0 bits (71), Expect(2) = 2e-24
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +1
Query: 1 KADRVTDALEIVDIMKRK 54
+ADR+TDA EIVDIMK++
Sbjct: 392 RADRITDAAEIVDIMKKR 409
Score = 61.6 bits (148), Expect = 6e-08
Identities = 28/84 (33%), Positives = 49/84 (58%)
Frame = +3
Query: 48 EKNAISEKIYGIIIHAYLRRNETNKALEIFQNMKNYGLLPSVTTYTNLMQHLFRLNEFQK 227
E+ + + IYG ++H LRR +ALE +MK G+ P+V YT+L+ H F+ + +K
Sbjct: 867 ERVTLDQYIYGSLVHGLLRRGRLKEALEKVDSMKQIGIHPTVHVYTSLIVHFFKEKQMRK 926
Query: 228 ASELYDEMIEKGLELDCIAIMSMV 299
A E + +M E+G E + +++
Sbjct: 927 ALETFQKMKEEGCEPTIVTYSALI 950
>ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
gi|449501176|ref|XP_004161299.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At5g06400,
mitochondrial-like [Cucumis sativus]
Length = 1037
Score = 107 bits (268), Expect(2) = 9e-24
Identities = 50/85 (58%), Positives = 66/85 (77%)
Frame = +3
Query: 45 EEKNAISEKIYGIIIHAYLRRNETNKALEIFQNMKNYGLLPSVTTYTNLMQHLFRLNEFQ 224
+ K + KIYGIII+ YLR+NE +KAL++FQNMK G P+ +TYT LMQHLF L E++
Sbjct: 396 KRKGDVDGKIYGIIINWYLRKNEVSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYE 455
Query: 225 KASELYDEMIEKGLELDCIAIMSMV 299
K ELY EM+EKG+ELD +AIM++V
Sbjct: 456 KGFELYKEMLEKGIELDTVAIMTVV 480
Score = 27.3 bits (59), Expect(2) = 9e-24
Identities = 10/18 (55%), Positives = 17/18 (94%)
Frame = +1
Query: 1 KADRVTDALEIVDIMKRK 54
+A+R+ DALE+++I+KRK
Sbjct: 381 RANRIEDALELINIIKRK 398
>ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536657|gb|EEF38299.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1072
Score = 96.7 bits (239), Expect(2) = 2e-21
Identities = 43/86 (50%), Positives = 65/86 (75%)
Frame = +3
Query: 45 EEKNAISEKIYGIIIHAYLRRNETNKALEIFQNMKNYGLLPSVTTYTNLMQHLFRLNEFQ 224
+++N I KIYGIII+ YLR+ + +KA+E+FQ MK G+ P +TYT LMQ LF LN++
Sbjct: 412 KKRNLIDAKIYGIIINGYLRKKDLSKAIELFQRMKESGIQPITSTYTELMQCLFNLNQYD 471
Query: 225 KASELYDEMIEKGLELDCIAIMSMVA 302
K EL++EM+E+G+ +D +A M++VA
Sbjct: 472 KGFELFNEMLERGIRVDSVATMAIVA 497
Score = 30.4 bits (67), Expect(2) = 2e-21
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = +1
Query: 1 KADRVTDALEIVDIMKRKML 60
+ DR+TDA+EIV+IMK++ L
Sbjct: 397 RGDRITDAVEIVEIMKKRNL 416
Score = 58.5 bits (140), Expect = 5e-07
Identities = 23/84 (27%), Positives = 50/84 (59%)
Frame = +3
Query: 48 EKNAISEKIYGIIIHAYLRRNETNKALEIFQNMKNYGLLPSVTTYTNLMQHLFRLNEFQK 227
E++ + + YG ++H LR+ +AL ++MK G+ P+V YT+L+ H F+ + +K
Sbjct: 889 ERSTLDQYTYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEK 948
Query: 228 ASELYDEMIEKGLELDCIAIMSMV 299
A +++++M + G E + +++
Sbjct: 949 AMQIFEKMQQDGCEPTVVTYSALI 972