BLASTX nr result

ID: Bupleurum21_contig00033097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033097
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331411.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_003606835.1| Arginine decarboxylase [Medicago truncatula]...   101   6e-20
ref|XP_002526238.1| Arginine decarboxylase, putative [Ricinus co...    96   2e-18
ref|XP_003541126.1| PREDICTED: arginine decarboxylase-like [Glyc...    96   4e-18
ref|XP_003606837.1| Arginine decarboxylase [Medicago truncatula]...    95   7e-18

>ref|XP_002331411.1| predicted protein [Populus trichocarpa] gi|222873625|gb|EEF10756.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score =  102 bits (254), Expect = 3e-20
 Identities = 60/129 (46%), Positives = 75/129 (58%)
 Frame = +1

Query: 4   ITLGACEEHIQRLVLGLKHLSEILYPHRNTEKKDRVDGDQHLSWSFIDTKISLTPREAFF 183
           I LG C EH QRLV GLK L       + TEK  RV+  +H    F D  ISL PR+AFF
Sbjct: 359 INLGTCREHNQRLVSGLKKLPTSSLHSKTTEK--RVESREHAP--FNDICISLNPRDAFF 414

Query: 184 AKKRKMSFTKSAGEICGEXXXXXXXXXXXXXXXXXXTDSALDYLLEVRDKGGEITGAADS 363
           A KR +S  +S G++CGE                  T+ AL+YLL+VR KG  +TGA+DS
Sbjct: 415 ANKRSVSVRESLGKVCGELICPYPPGIPVMIPGEIITERALNYLLDVRRKGAVVTGASDS 474

Query: 364 LLSSILVCD 390
            LSSI++CD
Sbjct: 475 HLSSIVICD 483


>ref|XP_003606835.1| Arginine decarboxylase [Medicago truncatula]
           gi|355507890|gb|AES89032.1| Arginine decarboxylase
           [Medicago truncatula]
          Length = 815

 Score =  101 bits (252), Expect = 6e-20
 Identities = 58/144 (40%), Positives = 85/144 (59%)
 Frame = +1

Query: 1   VITLGACEEHIQRLVLGLKHLSEILYPHRNTEKKDRVDGDQHLSWSFIDTKISLTPREAF 180
           V+ LG C +H+QRL+LG KHL+ +    +  ++KD+V  D      F D  +SLTPR+AF
Sbjct: 468 VLNLGTCRDHVQRLLLGAKHLAAVYSSIQ--QRKDKVLTDHA---PFDDIIMSLTPRDAF 522

Query: 181 FAKKRKMSFTKSAGEICGEXXXXXXXXXXXXXXXXXXTDSALDYLLEVRDKGGEITGAAD 360
           FA KRK+   +S G++ GE                  T+ A+DYLL VR +G +I+GA+D
Sbjct: 523 FASKRKVMVKESIGKVSGELICPYPPGIPVLIPGEVITEKAVDYLLHVRSEGADISGASD 582

Query: 361 SLLSSILVCDSQ*LLRRTKIVIYF 432
            LLSSI+VC+     RR + ++ F
Sbjct: 583 PLLSSIVVCNVYNTSRRDQFLMKF 606


>ref|XP_002526238.1| Arginine decarboxylase, putative [Ricinus communis]
           gi|223534432|gb|EEF36135.1| Arginine decarboxylase,
           putative [Ricinus communis]
          Length = 542

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 54/132 (40%), Positives = 74/132 (56%), Gaps = 5/132 (3%)
 Frame = +1

Query: 10  LGACEEHIQRLVLGLKHLSEILYPHRNTEKKDRVDGDQHLSWSFIDTKISLTPREAFFAK 189
           LG C+EH+QRLV GLK L+        TE++ +  G      SF D  + L PR+AFFA 
Sbjct: 414 LGTCKEHVQRLVSGLKELAACSLQSGTTEERLKEGG----YLSFADVSMRLNPRDAFFAN 469

Query: 190 KRKMSFTKSAGEICGEXXXXXXXXXXXXXXXXXXTDSALDYLLEVRDK-----GGEITGA 354
           KR++   +S GE+CGE                  T+ ALDYLL+V+ K     G  ++GA
Sbjct: 470 KRRVDIRESLGEVCGELICPYPPGIPVMIPGEIITEGALDYLLDVKRKGAVVSGAXVSGA 529

Query: 355 ADSLLSSILVCD 390
           +D LLSSI++CD
Sbjct: 530 SDPLLSSIVICD 541


>ref|XP_003541126.1| PREDICTED: arginine decarboxylase-like [Glycine max]
          Length = 560

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 54/127 (42%), Positives = 72/127 (56%)
 Frame = +1

Query: 10  LGACEEHIQRLVLGLKHLSEILYPHRNTEKKDRVDGDQHLSWSFIDTKISLTPREAFFAK 189
           LG C +H+QRL+ G+KHL+      +  E++        +   F D   SL PR+AFFA 
Sbjct: 438 LGTCRDHVQRLLSGIKHLAATYVTIQQPEERVLT-----VHAPFDDKITSLIPRDAFFAS 492

Query: 190 KRKMSFTKSAGEICGEXXXXXXXXXXXXXXXXXXTDSALDYLLEVRDKGGEITGAADSLL 369
           KRK++  +S GEI GE                  T  A+DYLL VR KGG+ITGA+D LL
Sbjct: 493 KRKVTIKESIGEISGELICPYPPGIPVLIPGEVITKKAVDYLLHVRSKGGDITGASDPLL 552

Query: 370 SSILVCD 390
           SSI+VC+
Sbjct: 553 SSIVVCN 559


>ref|XP_003606837.1| Arginine decarboxylase [Medicago truncatula]
           gi|355507892|gb|AES89034.1| Arginine decarboxylase
           [Medicago truncatula]
          Length = 526

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 53/130 (40%), Positives = 78/130 (60%)
 Frame = +1

Query: 1   VITLGACEEHIQRLVLGLKHLSEILYPHRNTEKKDRVDGDQHLSWSFIDTKISLTPREAF 180
           V+ LG C +H+QRL+ G K+L+ +    +  ++KD+V  D      F D  +SLTPR+AF
Sbjct: 401 VLNLGTCRDHVQRLLSGAKYLAAVYSSIQ--QRKDKVLTDHA---PFDDIIMSLTPRDAF 455

Query: 181 FAKKRKMSFTKSAGEICGEXXXXXXXXXXXXXXXXXXTDSALDYLLEVRDKGGEITGAAD 360
           FA KRK+   +S G++ GE                  T+ A+DYLL VR +G +I+GA+D
Sbjct: 456 FASKRKVMVKESIGKVSGELVCPYPPGIPVLIPGEVITEKAVDYLLHVRSEGADISGASD 515

Query: 361 SLLSSILVCD 390
            LLSSI+VC+
Sbjct: 516 PLLSSIVVCN 525


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