BLASTX nr result

ID: Bupleurum21_contig00033078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033078
         (404 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-08
ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07

>ref|XP_002329612.1| predicted protein [Populus trichocarpa] gi|222870351|gb|EEF07482.1|
           predicted protein [Populus trichocarpa]
          Length = 1046

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/104 (27%), Positives = 52/104 (50%)
 Frame = -2

Query: 313 QDLVFDYTPLPHGASVVCPPVEVLKKGIEKFRCCVVGTFVKGYLPFSRLVEHVSKAWDQK 134
           ++L F    +  G   V PP++V + G E ++  +VG FV   LP+  +     + W   
Sbjct: 123 RNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSY 182

Query: 133 GLLHISQKSEKQFLFKFDSISSMSNVIARGTWYFDKKPMLVRAW 2
           GL  +       F+F FDS+   +NV+ R  W+   +P++++ W
Sbjct: 183 GLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRW 226


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/104 (27%), Positives = 52/104 (50%)
 Frame = -2

Query: 313 QDLVFDYTPLPHGASVVCPPVEVLKKGIEKFRCCVVGTFVKGYLPFSRLVEHVSKAWDQK 134
           ++L F    +  G   V PP++V + G E ++  +VG F+   LP+  +     + W   
Sbjct: 123 RNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLPYPVVNSIAKRIWSSY 182

Query: 133 GLLHISQKSEKQFLFKFDSISSMSNVIARGTWYFDKKPMLVRAW 2
           GLL +       F+F FDS+   +NV+ R  W+    P++++ W
Sbjct: 183 GLLEVLSSDNGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRW 226


>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/92 (29%), Positives = 47/92 (51%)
 Frame = -2

Query: 277 GASVVCPPVEVLKKGIEKFRCCVVGTFVKGYLPFSRLVEHVSKAWDQKGLLHISQKSEKQ 98
           G   V PP++V + G E ++  +VG FV   LP+  +     + W   GL  +       
Sbjct: 135 GRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGF 194

Query: 97  FLFKFDSISSMSNVIARGTWYFDKKPMLVRAW 2
           F+F FDS+   +NV+ R  W+   +P++++ W
Sbjct: 195 FIFNFDSVDHATNVLERAPWHMANRPLVLKRW 226


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/104 (27%), Positives = 52/104 (50%)
 Frame = -2

Query: 313 QDLVFDYTPLPHGASVVCPPVEVLKKGIEKFRCCVVGTFVKGYLPFSRLVEHVSKAWDQK 134
           ++L F    +  G   V PP++V + G E ++  +VG FV   LP+  +     + W   
Sbjct: 123 RNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSY 182

Query: 133 GLLHISQKSEKQFLFKFDSISSMSNVIARGTWYFDKKPMLVRAW 2
           GL  +       F+F FDS+   +NV+ R  W+   +P++++ W
Sbjct: 183 GLSEVLSSDNGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRW 226


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/92 (28%), Positives = 46/92 (50%)
 Frame = -2

Query: 277 GASVVCPPVEVLKKGIEKFRCCVVGTFVKGYLPFSRLVEHVSKAWDQKGLLHISQKSEKQ 98
           G   V PP++V + G E ++  +VG FV   LP+  +     + W   GL  +       
Sbjct: 135 GRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGF 194

Query: 97  FLFKFDSISSMSNVIARGTWYFDKKPMLVRAW 2
           F+F FD +   +NV+ R  W+   +P++++ W
Sbjct: 195 FIFNFDYVDHATNVLERAPWHMANRPLVLKRW 226



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/92 (28%), Positives = 46/92 (50%)
 Frame = -2

Query: 277  GASVVCPPVEVLKKGIEKFRCCVVGTFVKGYLPFSRLVEHVSKAWDQKGLLHISQKSEKQ 98
            G   V PP++V + G E ++  +VG FV   LP+  +     + W   GL  +       
Sbjct: 928  GRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGF 987

Query: 97   FLFKFDSISSMSNVIARGTWYFDKKPMLVRAW 2
            F+F FD +   +NV+ R  W+   +P++++ W
Sbjct: 988  FIFNFDYVDHATNVLERAPWHMANRPLVLKRW 1019


Top