BLASTX nr result

ID: Bupleurum21_contig00033076 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033076
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28908.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
ref|XP_002532772.1| pentatricopeptide repeat-containing protein,...   121   7e-26
ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25
ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containi...   119   3e-25

>emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/68 (88%), Positives = 66/68 (97%)
 Frame = -2

Query: 366 RIEQACKLADGIVDRGREIPGKVRTIMINALRKAGNADLAMKLMHSKIGIGYDRRGSVKK 187
           R EQACKLADGIVDRGRE+PG+VRTI+INALRKAGNADLAMKLMHSKIGIGYDR GS+K+
Sbjct: 589 RTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKLMHSKIGIGYDRMGSIKR 648

Query: 186 RVKFRVLI 163
           RVKFRVL+
Sbjct: 649 RVKFRVLV 656


>ref|XP_002329409.1| predicted protein [Populus trichocarpa] gi|222870459|gb|EEF07590.1|
           predicted protein [Populus trichocarpa]
          Length = 599

 Score =  122 bits (307), Expect = 2e-26
 Identities = 57/68 (83%), Positives = 66/68 (97%)
 Frame = -2

Query: 366 RIEQACKLADGIVDRGREIPGKVRTIMINALRKAGNADLAMKLMHSKIGIGYDRRGSVKK 187
           RI++ACKLADG VDRGREIPG+VRT++INALRKAGNADLA+KLMHSKIGIGYDR GSVK+
Sbjct: 531 RIKEACKLADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGYDRMGSVKR 590

Query: 186 RVKFRVLI 163
           RVKFR+L+
Sbjct: 591 RVKFRILV 598


>ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527482|gb|EEF29611.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 647

 Score =  121 bits (303), Expect = 7e-26
 Identities = 57/68 (83%), Positives = 66/68 (97%)
 Frame = -2

Query: 366 RIEQACKLADGIVDRGREIPGKVRTIMINALRKAGNADLAMKLMHSKIGIGYDRRGSVKK 187
           RI++ACKLADGIVDRGREIPG+VRT++INALRKAGNADLA+KLM SKIGIGYDR GSVK+
Sbjct: 578 RIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRSKIGIGYDRMGSVKR 637

Query: 186 RVKFRVLI 163
           RVKFR+L+
Sbjct: 638 RVKFRILV 645


>ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/68 (79%), Positives = 65/68 (95%)
 Frame = -2

Query: 366 RIEQACKLADGIVDRGREIPGKVRTIMINALRKAGNADLAMKLMHSKIGIGYDRRGSVKK 187
           RI++ACKLADGIVDRGREIPG++RT++INALRKAGN+DL +KLMHSKIGIGYDR GS+K+
Sbjct: 584 RIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKR 643

Query: 186 RVKFRVLI 163
           RVKFR L+
Sbjct: 644 RVKFRTLL 651


>ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  119 bits (297), Expect = 3e-25
 Identities = 54/68 (79%), Positives = 65/68 (95%)
 Frame = -2

Query: 366 RIEQACKLADGIVDRGREIPGKVRTIMINALRKAGNADLAMKLMHSKIGIGYDRRGSVKK 187
           RI++ACKLADGIVDRGREIPG++RT++INALRKAGN+DL +KLMHSKIGIGYDR GS+K+
Sbjct: 582 RIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSKIGIGYDRMGSIKR 641

Query: 186 RVKFRVLI 163
           RVKFR L+
Sbjct: 642 RVKFRTLL 649


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