BLASTX nr result

ID: Bupleurum21_contig00033060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033060
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633802.1| PREDICTED: polygalacturonase At1g48100 [Viti...    87   1e-32
gb|ABW76153.1| polygalacturonase [Vitis vinifera]                      87   1e-32
ref|NP_001238104.1| polygalacturonase PG2 precursor [Glycine max...    88   2e-32
ref|NP_001238091.1| polygalacturonase PG1 precursor [Glycine max...    88   3e-32
gb|ACU24545.1| unknown [Glycine max]                                   88   4e-32

>ref|XP_003633802.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
           gi|296087645|emb|CBI34901.3| unnamed protein product
           [Vitis vinifera]
          Length = 483

 Score = 87.0 bits (214), Expect(2) = 1e-32
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -1

Query: 140 GDDCISIQTGCSGIYIHDVICGPGHGISIGSLGKDNTRACVSNVTV 3
           GDDC+SIQTGCS I++H+V CGPGHGISIG LG+DNT+ACV NVTV
Sbjct: 290 GDDCVSIQTGCSNIFVHNVNCGPGHGISIGGLGRDNTKACVKNVTV 335



 Score = 77.8 bits (190), Expect(2) = 1e-32
 Identities = 36/49 (73%), Positives = 41/49 (83%)
 Frame = -2

Query: 292 NQATLFLKFDDCTVVQVFGISVSSPGDSPNTDGIHLQNSQNVLIHDSNL 146
           N     LKFDDCT VQV G++VSSPGDSPNTDGIHLQNSQNV+I+ +NL
Sbjct: 239 NSPQTHLKFDDCTGVQVSGVTVSSPGDSPNTDGIHLQNSQNVVIYSTNL 287


>gb|ABW76153.1| polygalacturonase [Vitis vinifera]
          Length = 483

 Score = 87.0 bits (214), Expect(2) = 1e-32
 Identities = 36/46 (78%), Positives = 42/46 (91%)
 Frame = -1

Query: 140 GDDCISIQTGCSGIYIHDVICGPGHGISIGSLGKDNTRACVSNVTV 3
           GDDC+SIQTGCS I++H+V CGPGHGISIG LG+DNT+ACV NVTV
Sbjct: 290 GDDCVSIQTGCSNIFVHNVNCGPGHGISIGGLGRDNTKACVENVTV 335



 Score = 77.8 bits (190), Expect(2) = 1e-32
 Identities = 36/49 (73%), Positives = 41/49 (83%)
 Frame = -2

Query: 292 NQATLFLKFDDCTVVQVFGISVSSPGDSPNTDGIHLQNSQNVLIHDSNL 146
           N     LKFDDCT VQV G++VSSPGDSPNTDGIHLQNSQNV+I+ +NL
Sbjct: 239 NSPQTHLKFDDCTGVQVSGVTVSSPGDSPNTDGIHLQNSQNVVIYSTNL 287


>ref|NP_001238104.1| polygalacturonase PG2 precursor [Glycine max]
           gi|5669848|gb|AAD46484.1| polygalacturonase PG2 [Glycine
           max]
          Length = 439

 Score = 88.2 bits (217), Expect(2) = 2e-32
 Identities = 38/46 (82%), Positives = 43/46 (93%)
 Frame = -1

Query: 140 GDDCISIQTGCSGIYIHDVICGPGHGISIGSLGKDNTRACVSNVTV 3
           GDDCISIQTGCS IY+H+V CGPGHGISIGSLG++NT+ACV NVTV
Sbjct: 245 GDDCISIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNVTV 290



 Score = 75.9 bits (185), Expect(2) = 2e-32
 Identities = 37/49 (75%), Positives = 39/49 (79%)
 Frame = -2

Query: 292 NQATLFLKFDDCTVVQVFGISVSSPGDSPNTDGIHLQNSQNVLIHDSNL 146
           N     LKFD CT VQV GISVSSPGDSPNTDGIHLQNSQNV+I+ S L
Sbjct: 194 NSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIHLQNSQNVVIYSSTL 242


>ref|NP_001238091.1| polygalacturonase PG1 precursor [Glycine max]
           gi|5669846|gb|AAD46483.1| polygalacturonase PG1 [Glycine
           max]
          Length = 443

 Score = 87.8 bits (216), Expect(2) = 3e-32
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -1

Query: 140 GDDCISIQTGCSGIYIHDVICGPGHGISIGSLGKDNTRACVSNVTV 3
           GDDC+SIQTGCS IY+H+V CGPGHGISIGSLG++NT+ACV NVTV
Sbjct: 249 GDDCVSIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNVTV 294



 Score = 75.9 bits (185), Expect(2) = 3e-32
 Identities = 37/49 (75%), Positives = 39/49 (79%)
 Frame = -2

Query: 292 NQATLFLKFDDCTVVQVFGISVSSPGDSPNTDGIHLQNSQNVLIHDSNL 146
           N     LKFD CT VQV GISVSSPGDSPNTDGIHLQNSQNV+I+ S L
Sbjct: 198 NSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIHLQNSQNVVIYSSTL 246


>gb|ACU24545.1| unknown [Glycine max]
          Length = 443

 Score = 87.8 bits (216), Expect(2) = 4e-32
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -1

Query: 140 GDDCISIQTGCSGIYIHDVICGPGHGISIGSLGKDNTRACVSNVTV 3
           GDDC+SIQTGCS IY+H+V CGPGHGISIGSLG++NT+ACV NVTV
Sbjct: 249 GDDCVSIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNVTV 294



 Score = 75.5 bits (184), Expect(2) = 4e-32
 Identities = 36/49 (73%), Positives = 39/49 (79%)
 Frame = -2

Query: 292 NQATLFLKFDDCTVVQVFGISVSSPGDSPNTDGIHLQNSQNVLIHDSNL 146
           N     LKFD CT VQV GISVSSPGDSPNTDGIHLQNSQNV+++ S L
Sbjct: 198 NSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIHLQNSQNVVVYSSTL 246


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