BLASTX nr result

ID: Bupleurum21_contig00033029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033029
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001077459.1| HIT-type Zinc finger family protein [Arabido...   109   2e-22
ref|NP_001184910.1| HIT-type Zinc finger family protein [Arabido...   109   2e-22
ref|NP_001077460.1| HIT-type Zinc finger family protein [Arabido...   109   2e-22
emb|CBI32194.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002269272.1| PREDICTED: box C/D snoRNA protein 1 [Vitis v...   109   3e-22

>ref|NP_001077459.1| HIT-type Zinc finger family protein [Arabidopsis thaliana]
           gi|332189641|gb|AEE27762.1| HIT-type Zinc finger family
           protein [Arabidopsis thaliana]
          Length = 367

 Score =  109 bits (273), Expect = 2e-22
 Identities = 46/65 (70%), Positives = 54/65 (83%)
 Frame = -3

Query: 247 DTMCEVCKDNPSKYKCPGCSIRSCSLPCVKTHKQSTGCTGKRQLTQIIPLSQFDDNLLIS 68
           D++CE CK NP KYKCPGCSIRSC+LPCVK HKQ TGCTGKR+ T ++PLS+FDDNLL+S
Sbjct: 3   DSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLLS 62

Query: 67  GNTFL 53
               L
Sbjct: 63  DYNML 67


>ref|NP_001184910.1| HIT-type Zinc finger family protein [Arabidopsis thaliana]
           gi|332189643|gb|AEE27764.1| HIT-type Zinc finger family
           protein [Arabidopsis thaliana]
          Length = 644

 Score =  109 bits (273), Expect = 2e-22
 Identities = 46/65 (70%), Positives = 54/65 (83%)
 Frame = -3

Query: 247 DTMCEVCKDNPSKYKCPGCSIRSCSLPCVKTHKQSTGCTGKRQLTQIIPLSQFDDNLLIS 68
           D++CE CK NP KYKCPGCSIRSC+LPCVK HKQ TGCTGKR+ T ++PLS+FDDNLL+S
Sbjct: 255 DSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLLS 314

Query: 67  GNTFL 53
               L
Sbjct: 315 DYNML 319


>ref|NP_001077460.1| HIT-type Zinc finger family protein [Arabidopsis thaliana]
           gi|110743023|dbj|BAE99404.1| hypothetical protein
           [Arabidopsis thaliana] gi|332189642|gb|AEE27763.1|
           HIT-type Zinc finger family protein [Arabidopsis
           thaliana]
          Length = 392

 Score =  109 bits (273), Expect = 2e-22
 Identities = 46/65 (70%), Positives = 54/65 (83%)
 Frame = -3

Query: 247 DTMCEVCKDNPSKYKCPGCSIRSCSLPCVKTHKQSTGCTGKRQLTQIIPLSQFDDNLLIS 68
           D++CE CK NP KYKCPGCSIRSC+LPCVK HKQ TGCTGKR+ T ++PLS+FDDNLL+S
Sbjct: 3   DSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLLLS 62

Query: 67  GNTFL 53
               L
Sbjct: 63  DYNML 67


>emb|CBI32194.3| unnamed protein product [Vitis vinifera]
          Length = 383

 Score =  109 bits (272), Expect = 3e-22
 Identities = 47/63 (74%), Positives = 52/63 (82%)
 Frame = -3

Query: 241 MCEVCKDNPSKYKCPGCSIRSCSLPCVKTHKQSTGCTGKRQLTQIIPLSQFDDNLLISGN 62
           +C+ CK NPSKY CPGCS+RSCSLPCVK HKQ TGCTGKRQ TQ +PLSQFDDNLL+S  
Sbjct: 14  LCQECKLNPSKYTCPGCSVRSCSLPCVKAHKQQTGCTGKRQQTQFVPLSQFDDNLLLSDY 73

Query: 61  TFL 53
             L
Sbjct: 74  NLL 76


>ref|XP_002269272.1| PREDICTED: box C/D snoRNA protein 1 [Vitis vinifera]
           gi|147778999|emb|CAN60314.1| hypothetical protein
           VITISV_036305 [Vitis vinifera]
          Length = 385

 Score =  109 bits (272), Expect = 3e-22
 Identities = 47/63 (74%), Positives = 52/63 (82%)
 Frame = -3

Query: 241 MCEVCKDNPSKYKCPGCSIRSCSLPCVKTHKQSTGCTGKRQLTQIIPLSQFDDNLLISGN 62
           +C+ CK NPSKY CPGCS+RSCSLPCVK HKQ TGCTGKRQ TQ +PLSQFDDNLL+S  
Sbjct: 14  LCQECKLNPSKYTCPGCSVRSCSLPCVKAHKQQTGCTGKRQQTQFVPLSQFDDNLLLSDY 73

Query: 61  TFL 53
             L
Sbjct: 74  NLL 76


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