BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00033001
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]              447   e-123
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici...   447   e-123
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...   444   e-122
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]              441   e-121
ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-li...   434   e-119

>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  447 bits (1150), Expect = e-123
 Identities = 214/315 (67%), Positives = 252/315 (80%), Gaps = 2/315 (0%)
 Frame = +2

Query: 8    GLTNCLVFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVPPMDYTGRRPRIMDHV 187
            GL +CLVFPQKGERPHPNECSGGDLDGD +FISWD+ LIP +T PPMDYTGRRPRIMDH 
Sbjct: 799  GLVDCLVFPQKGERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHE 858

Query: 188  VSMEEIQKFFVDYLINDSLGTISTAHLVHADRQPDKALSETCLHLANLHSMAVDFAKTGA 367
            V++EEIQKFFVDY+IND+LG ISTAHLVHADR+PDKA SE CL LA LHSMAVDFAKTGA
Sbjct: 859  VTLEEIQKFFVDYMINDTLGAISTAHLVHADREPDKACSENCLALATLHSMAVDFAKTGA 918

Query: 368  PAEMPRALKPRMFPDFMERWEKQSYTSQGALGKLYRATVEYLEGANTDAFYSNNIQD-YY 544
            PAEMPRALKPR FPDFM+R  K  YTS G LGKLYRAT+       +   ++  + +  Y
Sbjct: 919  PAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQTRSKFVWTKEMAELVY 978

Query: 545  DHDLEVNGFETFIGIAEDHKGMYLDKIIALMRYYEAEYEIEMLSGNLQRHSSYLLRDNRR 724
            DHDLEVNGFE+ I +AE HK MY +++  LM YY+ EYE E+L+GN+   + +LLRDNRR
Sbjct: 979  DHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNIYNKAQFLLRDNRR 1038

Query: 725  YGETKDRILVAMKNLHKEAKGWFDSNCS-VQEQQKLASAWYHVTYHPTYCQENIKCLGFP 901
            YGE K+RI++++K+L +EAK WF S+CS   E QKLASAWY+VTYHP Y QE +  L FP
Sbjct: 1039 YGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLASAWYYVTYHPNYFQERMNSLSFP 1098

Query: 902  WIVGDILLDIKSTNK 946
            WIVGDILL +KS NK
Sbjct: 1099 WIVGDILLRVKSRNK 1113


>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223550546|gb|EEF52033.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 983

 Score =  447 bits (1150), Expect = e-123
 Identities = 213/319 (66%), Positives = 253/319 (79%), Gaps = 1/319 (0%)
 Frame = +2

Query: 8    GLTNCLVFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVPPMDYTGRRPRIMDHV 187
            GL +C++FPQKGERPHPNECSGGDLDGD +FISWD+ LIP  T  PMDY GRRPR MDH 
Sbjct: 649  GLVDCILFPQKGERPHPNECSGGDLDGDQFFISWDKGLIPGETESPMDYQGRRPRKMDHD 708

Query: 188  VSMEEIQKFFVDYLINDSLGTISTAHLVHADRQPDKALSETCLHLANLHSMAVDFAKTGA 367
            V++EEIQKFF+DY+IND+LG ISTAHLVHADR+PDKA S  CL LA LHSMAVDFAKTGA
Sbjct: 709  VTLEEIQKFFIDYMINDTLGAISTAHLVHADREPDKARSSKCLQLAELHSMAVDFAKTGA 768

Query: 368  PAEMPRALKPRMFPDFMERWEKQSYTSQGALGKLYRATVEYLEGANTDAFYSNNIQD-YY 544
            PAEMP+ALKP+ FPDFMER +K+ Y S G LGKLYR T++      +   ++ NI +  Y
Sbjct: 769  PAEMPKALKPKEFPDFMERIDKKMYISGGVLGKLYRGTLDSTRQQRSKFVWTENIAEATY 828

Query: 545  DHDLEVNGFETFIGIAEDHKGMYLDKIIALMRYYEAEYEIEMLSGNLQRHSSYLLRDNRR 724
            DHDLEV GFE F+ IA  HK MY++K+  LM YYEA+ E E+L+GNLQ  + YL RDNRR
Sbjct: 829  DHDLEVKGFEEFVEIAISHKDMYVEKLSGLMDYYEAKKEDEILTGNLQNKAMYLQRDNRR 888

Query: 725  YGETKDRILVAMKNLHKEAKGWFDSNCSVQEQQKLASAWYHVTYHPTYCQENIKCLGFPW 904
            YG+TKDRIL+++K+L KEAK WF+S C  +E+Q+LASAWYHVTYHP+Y QE I CL FPW
Sbjct: 889  YGDTKDRILISVKSLQKEAKEWFESCCQAKEKQRLASAWYHVTYHPSYFQEGITCLSFPW 948

Query: 905  IVGDILLDIKSTNKKKSVT 961
            IV DILL+IKS N K   T
Sbjct: 949  IVADILLNIKSANSKNLKT 967


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score =  444 bits (1141), Expect = e-122
 Identities = 211/313 (67%), Positives = 250/313 (79%), Gaps = 1/313 (0%)
 Frame = +2

Query: 17   NCLVFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVPPMDYTGRRPRIMDHVVSM 196
            +C++FPQKGERPHPNECSGGDLDGDLYFISWDE LIP +TV PMDYTGRR RIMDH V++
Sbjct: 805  DCIIFPQKGERPHPNECSGGDLDGDLYFISWDENLIPRQTVTPMDYTGRRTRIMDHEVTL 864

Query: 197  EEIQKFFVDYLINDSLGTISTAHLVHADRQPDKALSETCLHLANLHSMAVDFAKTGAPAE 376
            +EIQ+FFVDY+I+D+LG ISTAHLVHADR+PDKAL+  CL LA LHSMAVDFAKTGA AE
Sbjct: 865  QEIQRFFVDYMISDTLGAISTAHLVHADREPDKALNPKCLQLATLHSMAVDFAKTGAAAE 924

Query: 377  MPRALKPRMFPDFMERWEKQSYTSQGALGKLYRATVEYLEGANTDAFYS-NNIQDYYDHD 553
            MPR LKPR FPDF+ERW+K  Y S+G LGKLYRA V     +N+D   S   IQD YDH 
Sbjct: 925  MPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIVNSSVRSNSDDLGSVRAIQDAYDHA 984

Query: 554  LEVNGFETFIGIAEDHKGMYLDKIIALMRYYEAEYEIEMLSGNLQRHSSYLLRDNRRYGE 733
            L  +G+E FI  A++HK  YLD++ +L+ YY AE E+E+L+GNL++ S YL RDNRRY E
Sbjct: 985  LLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKEVEILTGNLRQKSVYLQRDNRRYFE 1044

Query: 734  TKDRILVAMKNLHKEAKGWFDSNCSVQEQQKLASAWYHVTYHPTYCQENIKCLGFPWIVG 913
             KDRILV+ K+L KE KGWF   C   E +KLASAWYHVTYHP+YC+ +  CLGFPW+VG
Sbjct: 1045 LKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLASAWYHVTYHPSYCEGSANCLGFPWVVG 1104

Query: 914  DILLDIKSTNKKK 952
            DILLDIK  N +K
Sbjct: 1105 DILLDIKLHNTRK 1117


>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
          Length = 1147

 Score =  441 bits (1134), Expect = e-121
 Identities = 212/315 (67%), Positives = 251/315 (79%), Gaps = 2/315 (0%)
 Frame = +2

Query: 8    GLTNCLVFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVPPMDYTGRRPRIMDHV 187
            GL +CLVFP+KGERPHPNECSGGDLDGD +FISWD+ LIP +T PPMDYTGRRPRIMDH 
Sbjct: 799  GLVDCLVFPEKGERPHPNECSGGDLDGDQFFISWDKDLIPCQTEPPMDYTGRRPRIMDHE 858

Query: 188  VSMEEIQKFFVDYLINDSLGTISTAHLVHADRQPDKALSETCLHLANLHSMAVDFAKTGA 367
            V++EEIQKFFVDY+IND+LG ISTAHLVHADR+P KA SE CL LA LHSMAVDFAKTGA
Sbjct: 859  VTLEEIQKFFVDYMINDTLGAISTAHLVHADREPYKARSENCLALATLHSMAVDFAKTGA 918

Query: 368  PAEMPRALKPRMFPDFMERWEKQSYTSQGALGKLYRATVEYLEGANTDAFYSNNIQDY-Y 544
            PAEMPRALKPR FPDFM+R  K  YTS G LGKLYRAT+       +   ++  + +  Y
Sbjct: 919  PAEMPRALKPREFPDFMQRGNKPMYTSSGVLGKLYRATINSTVQIRSKFVWTKEMAELAY 978

Query: 545  DHDLEVNGFETFIGIAEDHKGMYLDKIIALMRYYEAEYEIEMLSGNLQRHSSYLLRDNRR 724
            DHDLEVNGFE+ I +AE HK MY +++  LM YY+ EYE E+L+GN+   + +LLRDNRR
Sbjct: 979  DHDLEVNGFESLISVAETHKEMYEERMSLLMSYYDVEYEDEILTGNMYNKAQFLLRDNRR 1038

Query: 725  YGETKDRILVAMKNLHKEAKGWFDSNCS-VQEQQKLASAWYHVTYHPTYCQENIKCLGFP 901
            YGE K+RI++++K+L +EAK WF S+CS   E QKLASAWY+VTYHP Y +E +  L FP
Sbjct: 1039 YGEMKERIVLSVKDLQREAKEWFKSSCSKADEHQKLASAWYYVTYHPNYFEERMNSLSFP 1098

Query: 902  WIVGDILLDIKSTNK 946
            WIVGDILL IKS NK
Sbjct: 1099 WIVGDILLRIKSRNK 1113


>ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
          Length = 1117

 Score =  434 bits (1116), Expect = e-119
 Identities = 206/316 (65%), Positives = 250/316 (79%), Gaps = 1/316 (0%)
 Frame = +2

Query: 8    GLTNCLVFPQKGERPHPNECSGGDLDGDLYFISWDEKLIPPRTVPPMDYTGRRPRIMDHV 187
            GL +CL+FPQKG RPH NECSGGDLDGDLYFISWDE LIPP+T  PMDYTGRRPRIMDH 
Sbjct: 799  GLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWDENLIPPKTEAPMDYTGRRPRIMDHD 858

Query: 188  VSMEEIQKFFVDYLINDSLGTISTAHLVHADRQPDKALSETCLHLANLHSMAVDFAKTGA 367
            V +EEIQKFFVDY+IND+LG ISTAHLVHADR+P KALS  CL LA LHSMAVDFAKTGA
Sbjct: 859  VKLEEIQKFFVDYMINDTLGAISTAHLVHADREPKKALSAKCLELAALHSMAVDFAKTGA 918

Query: 368  PAEMPRALKPRMFPDFMERWEKQSYTSQGALGKLYRATVEYLEGANTDAFYSNN-IQDYY 544
            PAEMPR LKPR FPDFMER++K  Y S   LGKLYRA V+ +E   +   +S    +  Y
Sbjct: 919  PAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLYRAAVKSIEQERSRLVWSEEAARAIY 978

Query: 545  DHDLEVNGFETFIGIAEDHKGMYLDKIIALMRYYEAEYEIEMLSGNLQRHSSYLLRDNRR 724
            D+DLEV+GFE F+ IAE +K MY++K+  LM YY AEYE E+L G+L+  +SYL RDNR+
Sbjct: 979  DYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYGAEYEDEILMGDLRSRASYLQRDNRK 1038

Query: 725  YGETKDRILVAMKNLHKEAKGWFDSNCSVQEQQKLASAWYHVTYHPTYCQENIKCLGFPW 904
            YG+ KDRIL+++KNL KE K WF+++C    ++ +ASAWYHVTYHP+Y +E++  L FPW
Sbjct: 1039 YGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMMASAWYHVTYHPSYFKEDMFYLSFPW 1098

Query: 905  IVGDILLDIKSTNKKK 952
             V D+LL+IK+ N K+
Sbjct: 1099 AVSDVLLNIKAMNSKR 1114