BLASTX nr result

ID: Bupleurum21_contig00032790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032790
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267...   214   1e-53
emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]   214   1e-53
ref|XP_002531176.1| nucleic acid binding protein, putative [Rici...   213   2e-53
ref|XP_003535105.1| PREDICTED: uncharacterized protein LOC100806...   189   3e-46
ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|2...   188   6e-46

>ref|XP_003632719.1| PREDICTED: uncharacterized protein LOC100267595 [Vitis vinifera]
          Length = 238

 Score =  214 bits (545), Expect = 1e-53
 Identities = 115/196 (58%), Positives = 140/196 (71%), Gaps = 7/196 (3%)
 Frame = +2

Query: 62  EYNTSTTIKEDNGSESNRKFECHYCCRNFPTSQALGGHQNAHKRERQNAKRAHLQSAMVH 241
           E N    +K+    ES R+FECHYCCRNFPTSQALGGHQNAHKRERQ+AKRAHLQSAMVH
Sbjct: 55  ETNMCEDVKDSENGESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVH 114

Query: 242 GGYPEAHMYGLMNYHRFGSAPSPPALAYHQSASSFTSNINNRFYGGHGSNSYTSTTPQHQ 421
            G  +AHMYGL+NY R GSAP+PP + Y    S   S+ N RFYG HGS S        Q
Sbjct: 115 SGLSDAHMYGLVNY-RLGSAPTPP-ITYPSWGSQAISS-NGRFYGSHGSFS--------Q 163

Query: 422 QPITGNPLALWRVP-SVHNSPSYNYERDMNHQ-PLFANNKMEASLTNIGSSSSQNRYVYE 595
            PI GNPLALWR+P SV  +P+++ +R  +H  PLFA + ++ S +++G S+SQ+RYVYE
Sbjct: 164 PPINGNPLALWRIPASVQTTPTFSRDRSSHHPLPLFAGDDLKPS-SHVGGSTSQSRYVYE 222

Query: 596 S-----KDHVSLDLHL 628
           S     +DHVSLDLHL
Sbjct: 223 STKPGVQDHVSLDLHL 238


>emb|CAN68511.1| hypothetical protein VITISV_043839 [Vitis vinifera]
          Length = 270

 Score =  214 bits (545), Expect = 1e-53
 Identities = 115/196 (58%), Positives = 140/196 (71%), Gaps = 7/196 (3%)
 Frame = +2

Query: 62  EYNTSTTIKEDNGSESNRKFECHYCCRNFPTSQALGGHQNAHKRERQNAKRAHLQSAMVH 241
           E N    +K+    ES R+FECHYCCRNFPTSQALGGHQNAHKRERQ+AKRAHLQSAMVH
Sbjct: 87  ETNMCEDVKDSENGESGRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSAMVH 146

Query: 242 GGYPEAHMYGLMNYHRFGSAPSPPALAYHQSASSFTSNINNRFYGGHGSNSYTSTTPQHQ 421
            G  +AHMYGL+NY R GSAP+PP + Y    S   S+ N RFYG HGS S        Q
Sbjct: 147 SGLSDAHMYGLVNY-RLGSAPTPP-ITYPSWGSQAISS-NGRFYGSHGSFS--------Q 195

Query: 422 QPITGNPLALWRVP-SVHNSPSYNYERDMNHQ-PLFANNKMEASLTNIGSSSSQNRYVYE 595
            PI GNPLALWR+P SV  +P+++ +R  +H  PLFA + ++ S +++G S+SQ+RYVYE
Sbjct: 196 PPINGNPLALWRIPASVQTTPTFSRDRSSHHPLPLFAGDDLKPS-SHVGGSTSQSRYVYE 254

Query: 596 S-----KDHVSLDLHL 628
           S     +DHVSLDLHL
Sbjct: 255 STKPGVQDHVSLDLHL 270


>ref|XP_002531176.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529246|gb|EEF31219.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 231

 Score =  213 bits (543), Expect = 2e-53
 Identities = 117/207 (56%), Positives = 143/207 (69%), Gaps = 5/207 (2%)
 Frame = +2

Query: 23  AAAVDESNSQTRGEYNTSTTIKEDNGSESNRKFECHYCCRNFPTSQALGGHQNAHKRERQ 202
           +AA D+S S    E NT    KE    ++NR+FECHYCCRNFPTSQALGGHQNAHKRERQ
Sbjct: 45  SAAGDDSASAETNEDNT----KESESGDNNRRFECHYCCRNFPTSQALGGHQNAHKRERQ 100

Query: 203 NAKRAHLQSAMVHGGYPEAHMYGLMNYHRFGSAPSPPALAYHQSASSFTSNIN-NRFYGG 379
           +AKRAHLQSAMVH  + +AH+YG+MNY R GS P+ PA++Y     S+ S+ N +RFYG 
Sbjct: 101 HAKRAHLQSAMVHNSFSDAHIYGMMNY-RIGSNPT-PAMSY----PSWNSHANSSRFYGS 154

Query: 380 HGSNSYTSTTPQHQQPITGNPLALWRVPSVHNSPSYNYERDMNHQPLFANNKMEASLTNI 559
           HGS          QQPI G+PL LWR+P+VH+S + + +R MN  PLF+    E  L+ +
Sbjct: 155 HGS--------YPQQPINGSPLGLWRIPTVHSSATLHRDRSMNPLPLFSGE--ELKLSQV 204

Query: 560 GSSSSQNRYVYESK----DHVSLDLHL 628
           G SSSQ RY YE K    DHVSLDLHL
Sbjct: 205 GGSSSQGRYGYEGKPSVQDHVSLDLHL 231


>ref|XP_003535105.1| PREDICTED: uncharacterized protein LOC100806594 [Glycine max]
          Length = 269

 Score =  189 bits (481), Expect = 3e-46
 Identities = 108/203 (53%), Positives = 136/203 (66%), Gaps = 18/203 (8%)
 Frame = +2

Query: 74  STTIKEDNGSESNRKFECHYCCRNFPTSQALGGHQNAHKRERQNAKRAHLQSAMVHGG-Y 250
           S T   D   ES+R+FECHYCCRNFPTSQALGGHQNAHKRERQ+AKRAHLQS MVHG  +
Sbjct: 71  SDTGTTDTNGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRAHLQSTMVHGSTF 130

Query: 251 PEA-HMYGLMNYHRFGSA---PSPPALAYHQSASSFTSNINNRFYGGHGSNSYTSTTPQH 418
            +A H+Y LMNY R+GS+   P PP + Y    +   +N N RFYG   + S++      
Sbjct: 131 SDAHHVYNLMNY-RYGSSIPTPPPPTMPY---PTWNNNNNNTRFYGTTTTTSFSHHHQHQ 186

Query: 419 QQPITGNPLALWRVPS----VHNSPSYNYERDMNHQPLFAN----NKMEASLTNIGSS-- 568
           QQPI G+PLA WR+P+     +N+PS+++ER     PLFA     N   +S   +G+S  
Sbjct: 187 QQPINGSPLAFWRIPNGTTINNNNPSFSHERSSTLPPLFATEEIANVRASSQVVVGASGP 246

Query: 569 -SSQNRYVYESK--DHVSLDLHL 628
            ++QNRYVY+SK  DHVSLDLHL
Sbjct: 247 MTTQNRYVYDSKQRDHVSLDLHL 269


>ref|XP_002322740.1| predicted protein [Populus trichocarpa] gi|222867370|gb|EEF04501.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  188 bits (478), Expect = 6e-46
 Identities = 108/208 (51%), Positives = 134/208 (64%), Gaps = 5/208 (2%)
 Frame = +2

Query: 20  KAAAVDESNSQTRGEYNTSTTIKEDNGSESNRKFECHYCCRNFPTSQALGGHQNAHKRER 199
           ++ A DES+S    E       KE+  S++NR+FECHYCCRNFPTSQALGGHQNAHKRER
Sbjct: 45  ESPAADESDSAETNE----DAAKENESSDNNRRFECHYCCRNFPTSQALGGHQNAHKRER 100

Query: 200 QNAKRAHLQSAMVHGGYPEAHMYGLMNYHRFGSAPSPPALAYHQSASSFTSNINNRFYGG 379
           Q+AKRAHLQSAM+H    +AH YG++NY R  S  +  A   H S +S TS   NR+YGG
Sbjct: 101 QHAKRAHLQSAMIHNSLSDAHYYGILNY-RIDSIST--AAMTHPSWNSHTS--TNRYYGG 155

Query: 380 HGSNSYTSTTPQHQQPITGNPLALWRVPSVHNSPSYNY-ERDMNHQPLFANNKMEASLTN 556
            GS S        QQPI G+PL LWR+P+VH S +  + +R ++  P F+   ++ S   
Sbjct: 156 QGSYS--------QQPINGSPLGLWRIPAVHGSATLQHPDRSVHPLPSFSGEGLKPS--P 205

Query: 557 IGSSSSQNRYVYESK----DHVSLDLHL 628
            G SSS  RY YESK    D VSLDLHL
Sbjct: 206 AGGSSSHGRYGYESKSSVQDRVSLDLHL 233


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