BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00032252
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002894392.1| pentatricopeptide repeat-containing protein ...   113   2e-23
ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|2...   112   4e-23
ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   110   2e-22
ref|NP_175673.1| pentatricopeptide repeat-containing protein [Ar...   109   2e-22

>ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297340234|gb|EFH70651.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 525

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/72 (70%), Positives = 61/72 (84%)
 Frame = -1

Query: 218 PSPELVNDISRILSDFRNPKHDINSALTPFSPSISSNLVEQVLKRCKNLGFSAHRFFIWA 39
           PSPELVN+ISR+LSD RNPK D+   L  +SP +SSNLVEQVLKRCKNLGF AHRFF+WA
Sbjct: 33  PSPELVNEISRVLSDHRNPKDDLEHTLAAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWA 92

Query: 38  K*LPNFQHSKDS 3
           K +P+F+HS +S
Sbjct: 93  KRIPDFEHSLES 104


>ref|XP_002305285.1| predicted protein [Populus trichocarpa] gi|222848249|gb|EEE85796.1|
           predicted protein [Populus trichocarpa]
          Length = 523

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/82 (64%), Positives = 65/82 (79%)
 Frame = -1

Query: 248 SSVPNQNPCSPSPELVNDISRILSDFRNPKHDINSALTPFSPSISSNLVEQVLKRCKNLG 69
           S++   N   P P LVN+ISRILSD RNP HD+ ++L  FS  IS+NLVEQVLKRCKNLG
Sbjct: 33  STLTPLNQIPPLPGLVNEISRILSDQRNPHHDLETSLNAFSSEISTNLVEQVLKRCKNLG 92

Query: 68  FSAHRFFIWAK*LPNFQHSKDS 3
           FSAHRFF+WAK +P F+HS++S
Sbjct: 93  FSAHRFFLWAKRIPGFEHSEES 114


>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
           mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  110 bits (275), Expect = 1e-22
 Identities = 58/97 (59%), Positives = 68/97 (70%), Gaps = 1/97 (1%)
 Frame = -1

Query: 290 SLVKNKQWRRVFFSSSVPNQNPCS-PSPELVNDISRILSDFRNPKHDINSALTPFSPSIS 114
           SL   K      FSS    Q+P S  S + +N+ISRILSDFR+P HD+   LT FS  I+
Sbjct: 20  SLSSPKTHHSRLFSSQTILQDPNSLSSSQYINEISRILSDFRDPHHDLERPLTAFSQKIT 79

Query: 113 SNLVEQVLKRCKNLGFSAHRFFIWAK*LPNFQHSKDS 3
             LVEQVLKRCKNLGFSAHRFF+WAK LP F+HSK+S
Sbjct: 80  PGLVEQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKES 116


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/82 (64%), Positives = 64/82 (78%)
 Frame = -1

Query: 248 SSVPNQNPCSPSPELVNDISRILSDFRNPKHDINSALTPFSPSISSNLVEQVLKRCKNLG 69
           SS+  +    PSP+LVN+ISRILSD RNP HD+  +LT +S  IS+ LVEQVLKRCKNLG
Sbjct: 29  SSLAPRTKNLPSPDLVNEISRILSDHRNPHHDLELSLTTYSSHISTTLVEQVLKRCKNLG 88

Query: 68  FSAHRFFIWAK*LPNFQHSKDS 3
           FSA RFF+WAK +P F HSK+S
Sbjct: 89  FSAQRFFLWAKRIPGFDHSKES 110


>ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g52640, mitochondrial; Flags: Precursor
           gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535
           DUF domains [Arabidopsis thaliana]
           gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis
           thaliana] gi|62320530|dbj|BAD95108.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332194712|gb|AEE32833.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/72 (68%), Positives = 60/72 (83%)
 Frame = -1

Query: 218 PSPELVNDISRILSDFRNPKHDINSALTPFSPSISSNLVEQVLKRCKNLGFSAHRFFIWA 39
           PSP+LVN+ISR+LSD RNPK D+   L  +SP +SSNLVEQVLKRCKNLGF AHRFF+WA
Sbjct: 33  PSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWA 92

Query: 38  K*LPNFQHSKDS 3
           + +P+F HS +S
Sbjct: 93  RRIPDFAHSLES 104