BLASTX nr result

ID: Bupleurum21_contig00031808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031808
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521088.1| PREDICTED: uncharacterized protein LOC100802...    68   7e-10
ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_002511640.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|1...    59   5e-07
ref|XP_003516807.1| PREDICTED: uncharacterized protein LOC100797...    57   1e-06

>ref|XP_003521088.1| PREDICTED: uncharacterized protein LOC100802738 [Glycine max]
          Length = 127

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 31/47 (65%), Positives = 35/47 (74%)
 Frame = -3

Query: 234 RGGFSGDKSNKHQNDQESSDQNNKGKSPSPSPRTATRRYKLLKDVMC 94
           R  +SG+K   H  DQE S  + KGKSP PSPRT+TRRYKLLKDVMC
Sbjct: 81  RSEYSGEKIKHHDRDQEMSGSSEKGKSPVPSPRTSTRRYKLLKDVMC 127


>ref|XP_002302513.1| predicted protein [Populus trichocarpa] gi|222844239|gb|EEE81786.1|
           predicted protein [Populus trichocarpa]
          Length = 131

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 4/58 (6%)
 Frame = -3

Query: 255 GGLVISKRGGFSGD----KSNKHQNDQESSDQNNKGKSPSPSPRTATRRYKLLKDVMC 94
           GG+V++KR  ++GD    + ++ +N   SSDQ  K  S  PSPR +TRRYKLLKDVMC
Sbjct: 74  GGIVVTKRSEYTGDHKIKQHDREENSTTSSDQKGKNPSGIPSPRPSTRRYKLLKDVMC 131


>ref|XP_002511640.1| conserved hypothetical protein [Ricinus communis]
           gi|223548820|gb|EEF50309.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
 Frame = -3

Query: 243 ISKRGGFSGDKSNKHQNDQESSDQNNKGKSPS--PSPRTATRRYKLLKDVMC 94
           ++ R  +SGDK  +H  +  +++   KGKSPS  PSPRTATRRYKLLKDVMC
Sbjct: 77  VTNRSEYSGDKIKQHDREDSTAE---KGKSPSGAPSPRTATRRYKLLKDVMC 125


>ref|XP_002326823.1| predicted protein [Populus trichocarpa] gi|118487002|gb|ABK95332.1|
           unknown [Populus trichocarpa]
           gi|222835138|gb|EEE73573.1| predicted protein [Populus
           trichocarpa]
          Length = 131

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
 Frame = -3

Query: 252 GLVISKRGGFSGD----KSNKHQNDQESSDQNNKGKSPSPSPRTATRRYKLLKDVMC 94
           G +++KR  +SGD    + ++ +N   SSDQ  K  S  PSPR  TRRYKLLKDVMC
Sbjct: 75  GTLVTKRSEYSGDHKIKQHDREENSTTSSDQKGKNPSGIPSPRPTTRRYKLLKDVMC 131


>ref|XP_003516807.1| PREDICTED: uncharacterized protein LOC100797722 [Glycine max]
          Length = 126

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/47 (55%), Positives = 31/47 (65%)
 Frame = -3

Query: 234 RGGFSGDKSNKHQNDQESSDQNNKGKSPSPSPRTATRRYKLLKDVMC 94
           R  +SG+K  K  +       + KGKSP+PSPR  TRRYKLLKDVMC
Sbjct: 80  RSEYSGEKMIKQHDHHREESGSEKGKSPTPSPRPGTRRYKLLKDVMC 126


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