BLASTX nr result

ID: Bupleurum21_contig00031621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031621
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08

>ref|XP_002332412.1| predicted protein [Populus trichocarpa] gi|222832345|gb|EEE70822.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/91 (35%), Positives = 53/91 (58%)
 Frame = -2

Query: 319 STVQFLPAGVSDHCSGLLKIFPPCRKLKIPFRFKNLWAQDEKFLSLLHDCWDVPVTGCKM 140
           S  +FLP+G+SDH   ++K+    + +K PFRF ++W   ++F+ L+   WD    GC M
Sbjct: 215 SEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMPLVKKVWDQNSGGCPM 274

Query: 139 FQLVEKTKKVKHVLKSLNSRKFQHLDRQVEN 47
           +QL  K +K K  LK  N   F ++  +V++
Sbjct: 275 YQLCCKLRKQKQELKLFNMAHFSNISDRVKD 305


>ref|XP_002331338.1| predicted protein [Populus trichocarpa] gi|222873371|gb|EEF10502.1|
           predicted protein [Populus trichocarpa]
          Length = 819

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/91 (35%), Positives = 52/91 (57%)
 Frame = -2

Query: 319 STVQFLPAGVSDHCSGLLKIFPPCRKLKIPFRFKNLWAQDEKFLSLLHDCWDVPVTGCKM 140
           S  +FLP+G+SDH   ++K+    +  K PFRF ++W   ++F+ L+   WD    GC M
Sbjct: 592 SEARFLPSGMSDHSPMVVKVIGNDQNKKKPFRFFDMWMDHDEFMPLVKKVWDQNSRGCPM 651

Query: 139 FQLVEKTKKVKHVLKSLNSRKFQHLDRQVEN 47
           +QL  K +K+K  LK  N   F ++  +V +
Sbjct: 652 YQLCCKLRKLKQELKLFNMAHFSNISDRVRD 682


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/71 (38%), Positives = 44/71 (61%)
 Frame = -2

Query: 319 STVQFLPAGVSDHCSGLLKIFPPCRKLKIPFRFKNLWAQDEKFLSLLHDCWDVPVTGCKM 140
           S  +FLP+G+SDH   ++K+    + +K PFRF ++W   ++F+ L+   WD    GC M
Sbjct: 739 SEARFLPSGMSDHSPMVVKVIGNDQNIKKPFRFFDMWMDHDEFMPLVKKVWDQNSGGCPM 798

Query: 139 FQLVEKTKKVK 107
           +QL  K +K+K
Sbjct: 799 YQLCCKLRKLK 809


Top