BLASTX nr result

ID: Bupleurum21_contig00031446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00031446
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308898.1| condensin complex components subunit [Populu...   225   3e-57
tpg|DAA63985.1| TPA: hypothetical protein ZEAMMB73_615268 [Zea m...   223   2e-56
ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like,...   222   2e-56
ref|XP_004136646.1| PREDICTED: condensin complex subunit 1-like ...   222   2e-56
ref|XP_003559854.1| PREDICTED: condensin complex subunit 1-like ...   219   2e-55

>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
            gi|222854874|gb|EEE92421.1| condensin complex components
            subunit [Populus trichocarpa]
          Length = 1334

 Score =  225 bits (574), Expect = 3e-57
 Identities = 111/125 (88%), Positives = 117/125 (93%)
 Frame = +2

Query: 5    PFLSKLCRNITLMHKYPDLQASAMLALCRLMIIDADFCDKNLQLLFTVVESAPSEIVRSN 184
            PFLSKLCRN +LM KYP+LQAS MLALCR MIID DFCD NLQLLFTVVESAPSE VRSN
Sbjct: 936  PFLSKLCRNFSLMQKYPELQASGMLALCRFMIIDPDFCDANLQLLFTVVESAPSETVRSN 995

Query: 185  CTIALGDLAVRFPNLLEPWTENVYARLRDTSIAVRKNAVLVLSHLILNDMMKVKGYINEM 364
            CTIALGDLAVRFPNLLEPWTEN+YARLRD S++VRKNAVLVLSHLILNDMMKVKGYINEM
Sbjct: 996  CTIALGDLAVRFPNLLEPWTENMYARLRDPSVSVRKNAVLVLSHLILNDMMKVKGYINEM 1055

Query: 365  AIRVE 379
            AIR+E
Sbjct: 1056 AIRLE 1060


>tpg|DAA63985.1| TPA: hypothetical protein ZEAMMB73_615268 [Zea mays]
          Length = 1388

 Score =  223 bits (567), Expect = 2e-56
 Identities = 106/126 (84%), Positives = 119/126 (94%)
 Frame = +2

Query: 2    GPFLSKLCRNITLMHKYPDLQASAMLALCRLMIIDADFCDKNLQLLFTVVESAPSEIVRS 181
            GPFLSKLCRN+ L+ K+PDLQASAMLALCRLMIIDA+FC+ NLQ+LFTV ESAPSE VRS
Sbjct: 913  GPFLSKLCRNLALLQKFPDLQASAMLALCRLMIIDAEFCEANLQILFTVAESAPSETVRS 972

Query: 182  NCTIALGDLAVRFPNLLEPWTENVYARLRDTSIAVRKNAVLVLSHLILNDMMKVKGYINE 361
            NCTIALGDLAVRFPNLL+PWTE +YARLRD S++VRKNAVLV+SHLILNDMMKVKGYINE
Sbjct: 973  NCTIALGDLAVRFPNLLDPWTEYIYARLRDPSVSVRKNAVLVISHLILNDMMKVKGYINE 1032

Query: 362  MAIRVE 379
            MA+R+E
Sbjct: 1033 MAVRIE 1038


>ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like, partial [Cucumis
            sativus]
          Length = 1133

 Score =  222 bits (566), Expect = 2e-56
 Identities = 108/125 (86%), Positives = 118/125 (94%)
 Frame = +2

Query: 5    PFLSKLCRNITLMHKYPDLQASAMLALCRLMIIDADFCDKNLQLLFTVVESAPSEIVRSN 184
            PFLSKLCRN +L+HK+PDLQASAMLALCRLMIIDADFC  NLQLLFTVVE+APS+IVRSN
Sbjct: 931  PFLSKLCRNFSLLHKFPDLQASAMLALCRLMIIDADFCQANLQLLFTVVETAPSDIVRSN 990

Query: 185  CTIALGDLAVRFPNLLEPWTENVYARLRDTSIAVRKNAVLVLSHLILNDMMKVKGYINEM 364
            CTIALGDLAVRFPNLLEPWTEN+Y RL+D S +VRKNAVLVLSHLILNDMMKVKGYINEM
Sbjct: 991  CTIALGDLAVRFPNLLEPWTENMYVRLKDPSNSVRKNAVLVLSHLILNDMMKVKGYINEM 1050

Query: 365  AIRVE 379
             +R+E
Sbjct: 1051 TLRLE 1055


>ref|XP_004136646.1| PREDICTED: condensin complex subunit 1-like [Cucumis sativus]
          Length = 1321

 Score =  222 bits (566), Expect = 2e-56
 Identities = 108/125 (86%), Positives = 118/125 (94%)
 Frame = +2

Query: 5    PFLSKLCRNITLMHKYPDLQASAMLALCRLMIIDADFCDKNLQLLFTVVESAPSEIVRSN 184
            PFLSKLCRN +L+HK+PDLQASAMLALCRLMIIDADFC  NLQLLFTVVE+APS+IVRSN
Sbjct: 931  PFLSKLCRNFSLLHKFPDLQASAMLALCRLMIIDADFCQANLQLLFTVVETAPSDIVRSN 990

Query: 185  CTIALGDLAVRFPNLLEPWTENVYARLRDTSIAVRKNAVLVLSHLILNDMMKVKGYINEM 364
            CTIALGDLAVRFPNLLEPWTEN+Y RL+D S +VRKNAVLVLSHLILNDMMKVKGYINEM
Sbjct: 991  CTIALGDLAVRFPNLLEPWTENMYVRLKDPSNSVRKNAVLVLSHLILNDMMKVKGYINEM 1050

Query: 365  AIRVE 379
             +R+E
Sbjct: 1051 TLRLE 1055


>ref|XP_003559854.1| PREDICTED: condensin complex subunit 1-like [Brachypodium distachyon]
          Length = 1303

 Score =  219 bits (558), Expect = 2e-55
 Identities = 104/126 (82%), Positives = 119/126 (94%)
 Frame = +2

Query: 2    GPFLSKLCRNITLMHKYPDLQASAMLALCRLMIIDADFCDKNLQLLFTVVESAPSEIVRS 181
            GPFLSKLCRN+TL+ K+P+L ASAMLALCRLMI+DA+FC++NLQ+LFTV E+APSEIVRS
Sbjct: 917  GPFLSKLCRNLTLLQKFPELHASAMLALCRLMILDAEFCEENLQILFTVAETAPSEIVRS 976

Query: 182  NCTIALGDLAVRFPNLLEPWTENVYARLRDTSIAVRKNAVLVLSHLILNDMMKVKGYINE 361
            NCTIALGDL VRFPNLLEPWTE++YARL D S +VRKNAVLV+SHLILNDMMKVKGYINE
Sbjct: 977  NCTIALGDLVVRFPNLLEPWTEHIYARLSDQSASVRKNAVLVISHLILNDMMKVKGYINE 1036

Query: 362  MAIRVE 379
            MA+RVE
Sbjct: 1037 MAVRVE 1042


Top